RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 ZKSCAN5Q9Y2L8 839 aa5.13□□□□□ -1.59
HMGXB4-205ENST00000464480 ATP8A1Q9Y2Q0 1164 aa5.13□□□□□ -1.59
HMGXB4-205ENST00000464480 PSPNO60542 156 aa5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 PPP1R11O60927 126 aaPredicted RBP5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 ADAMTS4O75173 837 aa5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 MSL3P1P0C860 447 aa5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 PNLIPP16233 465 aa5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 AFMP43652 599 aa5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 SLC6A11P48066 632 aa5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 ERVFC1P60507 584 aa5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 STRN3Q13033 797 aa5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 GPR19Q15760 415 aa5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 SEPT7Q16181 437 aaKnown RBP5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 ARHGAP44Q17R89 818 aa5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 OTOP3Q7RTS5 596 aa5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 C2orf69Q8N8R5 385 aa5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 NETO2Q8NC67 525 aa5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 FLAD1Q8NFF5 587 aa5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 ATL2Q8NHH9 583 aa5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 ABHD4Q8TB40 342 aa5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 MTFR1LQ9H019 292 aa5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 AP5M1Q9H0R1 490 aa5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 C19orf44Q9H6X5 657 aa5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 SP110Q9HB58 689 aa5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 NUDT5Q9UKK9 219 aa5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 NUB1Q9Y5A7 615 aa5.12□□□□□ -1.59
HMGXB4-205ENST00000464480 SRGAP3O43295 1099 aa5.11□□□□□ -1.59
HMGXB4-205ENST00000464480 BRINP1O60477 761 aa5.11□□□□□ -1.59
HMGXB4-205ENST00000464480 GLI4P10075 376 aa5.11□□□□□ -1.59
HMGXB4-205ENST00000464480 PDE6AP16499 860 aa5.11□□□□□ -1.59
HMGXB4-205ENST00000464480 TRHRP34981 398 aaPredicted RBP5.11□□□□□ -1.59
HMGXB4-205ENST00000464480 KIR3DS1Q14943 382 aa5.11□□□□□ -1.59
HMGXB4-205ENST00000464480 TIGD5Q53EQ6 642 aa5.11□□□□□ -1.59
HMGXB4-205ENST00000464480 EP400NLQ6ZTU2 488 aa5.11□□□□□ -1.59
HMGXB4-205ENST00000464480 OVCH1Q7RTY7 1134 aa5.11□□□□□ -1.59
HMGXB4-205ENST00000464480 ABI1Q8IZP0 508 aa5.11□□□□□ -1.59
HMGXB4-205ENST00000464480 TTC1Q99614 292 aa5.11□□□□□ -1.59
HMGXB4-205ENST00000464480 IFT22Q9H7X7 185 aa5.11□□□□□ -1.59
HMGXB4-205ENST00000464480 TNFRSF12AQ9NP84 129 aa5.11□□□□□ -1.59
HMGXB4-205ENST00000464480 FBLN5Q9UBX5 448 aa5.11□□□□□ -1.59
HMGXB4-205ENST00000464480 B4GALT6Q9UBX8 382 aa5.11□□□□□ -1.59
HMGXB4-205ENST00000464480 CBLCQ9ULV8 474 aa5.11□□□□□ -1.59
HMGXB4-205ENST00000464480 APOBEC2Q9Y235 224 aaKnown RBP5.11□□□□□ -1.59
HMGXB4-205ENST00000464480 SLC12A8A0AV02 714 aa5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 ALG1L2C9J202 215 aa5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 F2P00734 622 aa5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 NTRK1P04629 796 aa5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 KRT15P19012 456 aa5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 POU3F3P20264 500 aaPredicted RBP5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 CDK11BP21127 795 aaKnown RBP5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 MECP2P51608 486 aaKnown RBP5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 IL2P60568 153 aa5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 LACTBP83111 547 aaPredicted RBP5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 OCRLQ01968 901 aa5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 EMC4Q5J8M3 183 aa5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 HABP4Q5JVS0 413 aaKnown RBP5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 STEAP3Q658P3 488 aa5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 CYP4F22Q6NT55 531 aa5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 DDX42Q86XP3 938 aaKnown RBP eCLIP5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 SIRT2Q8IXJ6 389 aa5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 UHMK1Q8TAS1 419 aaKnown RBP5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 PIP4K2CQ8TBX8 421 aa5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 PHOSPHO1Q8TCT1 267 aa5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 SEC14L1Q92503 715 aa5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 KIRREL1Q96J84 757 aa5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 BOCQ9BWV1 1114 aa5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 FAM126AQ9BYI3 521 aaPredicted RBP5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 RNF32Q9H0A6 362 aa5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 SLC6A20Q9NP91 592 aa5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 TYW1Q9NV66 732 aaKnown RBP5.1□□□□□ -1.59
HMGXB4-205ENST00000464480 PTPDC1A2A3K4 754 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 ZNF891A8MT65 544 aaPredicted RBP5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 ZNF561-AS1K7EIQ3 104 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 TRAF5O00463 557 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 HGSO14964 777 aaPredicted RBP5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 ZEB2O60315 1214 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 HIP1RO75146 1068 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 EFEMP2O95967 443 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 CYBBP04839 570 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 DBHP09172 617 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 PMLP29590 882 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 CDKN1CP49918 316 aaPredicted RBP5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 ERVFRD-1P60508 538 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 DSG1Q02413 1049 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 NR1I3Q14994 352 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 FIGNQ5HY92 759 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 PAQR3Q6TCH7 311 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 HHIPL2Q6UWX4 724 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 ARHGAP36Q6ZRI8 547 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 OTOP1Q7RTM1 612 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 STRA8Q7Z7C7 330 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 ATG4DQ86TL0 474 aaPredicted RBP5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 C11orf74Q86VG3 221 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 RPUSD2Q8IZ73 545 aaKnown RBP5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 NLGN4XQ8N0W4 816 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 NXPE1Q8N323 547 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 PRPF38AQ8NAV1 312 aaKnown RBP5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 SHISA4Q96DD7 197 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 PEX11GQ96HA9 241 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms