RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 RIC8AQ9NPQ8 531 aa23.9■■□□□ 1.42
CD58-204ENST00000464088 RAPGEFL1Q9UHV5 662 aa23.9■■□□□ 1.42
CD58-204ENST00000464088 SMCO2A6NFE2 343 aa23.89■■□□□ 1.41
CD58-204ENST00000464088 JAK2O60674 1132 aa23.89■■□□□ 1.41
CD58-204ENST00000464088 MRPS5P82675 430 aaKnown RBP23.89■■□□□ 1.41
CD58-204ENST00000464088 SMARCC2Q8TAQ2 1214 aa23.89■■□□□ 1.41
CD58-204ENST00000464088 RMDN3Q96TC7 470 aa23.89■■□□□ 1.41
CD58-204ENST00000464088 ZMYND12Q9H0C1 365 aa23.89■■□□□ 1.41
CD58-204ENST00000464088 SH3GLB2Q9NR46 395 aa23.89■■□□□ 1.41
CD58-204ENST00000464088 VPS54Q9P1Q0 977 aa23.89■■□□□ 1.41
CD58-204ENST00000464088 ORC3Q9UBD5 711 aaPredicted RBP23.89■■□□□ 1.41
CD58-204ENST00000464088 FAM184BQ9ULE4 1060 aa23.89■■□□□ 1.41
CD58-204ENST00000464088 FRMPD4Q14CM0 1322 aa23.88■■□□□ 1.41
CD58-204ENST00000464088 GRXCR1A8MXD5 290 aa23.88■■□□□ 1.41
CD58-204ENST00000464088 DUSP11O75319 330 aaKnown RBP23.88■■□□□ 1.41
CD58-204ENST00000464088 PLA2G5P39877 138 aa23.88■■□□□ 1.41
CD58-204ENST00000464088 ADCY7P51828 1080 aa23.88■■□□□ 1.41
CD58-204ENST00000464088 FCHSD1Q86WN1 690 aa23.88■■□□□ 1.41
CD58-204ENST00000464088 NSUN6Q8TEA1 469 aaKnown RBP23.88■■□□□ 1.41
CD58-204ENST00000464088 PPM1EQ8WY54 764 aa23.88■■□□□ 1.41
CD58-204ENST00000464088 CUL5Q93034 780 aa23.88■■□□□ 1.41
CD58-204ENST00000464088 LLPHQ9BRT6 129 aaKnown RBP23.88■■□□□ 1.41
CD58-204ENST00000464088 PXMP2Q9NR77 195 aa23.88■■□□□ 1.41
CD58-204ENST00000464088 BDP1A6H8Y1 2624 aa23.88■■□□□ 1.41
CD58-204ENST00000464088 CHD7Q9P2D1 2997 aa23.88■■□□□ 1.41
CD58-204ENST00000464088 GBF1Q92538 1859 aa23.87■■□□□ 1.41
CD58-204ENST00000464088 ADAMTS3O15072 1205 aa23.87■■□□□ 1.41
CD58-204ENST00000464088 CLK2P49760 499 aaKnown RBP23.87■■□□□ 1.41
CD58-204ENST00000464088 MRPL12P52815 198 aaKnown RBP23.87■■□□□ 1.41
CD58-204ENST00000464088 ADGRE1Q14246 886 aa23.87■■□□□ 1.41
CD58-204ENST00000464088 UBE2SQ16763 222 aa23.87■■□□□ 1.41
CD58-204ENST00000464088 FAM177A1Q8N128 213 aaPredicted RBP23.87■■□□□ 1.41
CD58-204ENST00000464088 TMEM199Q8N511 208 aa23.87■■□□□ 1.41
CD58-204ENST00000464088 CCDC12Q8WUD4 166 aaPredicted RBP23.87■■□□□ 1.41
CD58-204ENST00000464088 GLT1D1Q96MS3 346 aa23.87■■□□□ 1.41
CD58-204ENST00000464088 ABHD16BQ9H3Z7 469 aa23.87■■□□□ 1.41
CD58-204ENST00000464088 CSF2RAP15509 400 aa23.86■■□□□ 1.41
CD58-204ENST00000464088 EIF2AK2P19525 551 aaKnown RBP23.86■■□□□ 1.41
CD58-204ENST00000464088 ARHGEF16Q5VV41 709 aa23.86■■□□□ 1.41
CD58-204ENST00000464088 PSRC1Q6PGN9 363 aaPredicted RBP23.86■■□□□ 1.41
CD58-204ENST00000464088 PCSK9Q8NBP7 692 aaKnown RBP23.86■■□□□ 1.41
CD58-204ENST00000464088 CCDC148Q8NFR7 591 aa23.86■■□□□ 1.41
CD58-204ENST00000464088 IWS1Q96ST2 819 aa23.86■■□□□ 1.41
CD58-204ENST00000464088 UHRF1Q96T88 793 aaPredicted RBP23.86■■□□□ 1.41
CD58-204ENST00000464088 PDCD2LQ9BRP1 358 aa23.86■■□□□ 1.41
CD58-204ENST00000464088 GLT8D2Q9H1C3 349 aa23.86■■□□□ 1.41
CD58-204ENST00000464088 REV3LO60673 3130 aa23.86■■□□□ 1.41
CD58-204ENST00000464088 KIAA1217Q5T5P2 1943 aa23.85■■□□□ 1.41
CD58-204ENST00000464088 MYADML2A6NDP7 307 aa23.85■■□□□ 1.41
CD58-204ENST00000464088 ACVR2BQ13705 512 aa23.85■■□□□ 1.41
CD58-204ENST00000464088 RAB30Q15771 203 aa23.85■■□□□ 1.41
CD58-204ENST00000464088 ZNF365Q70YC5 407 aa23.85■■□□□ 1.41
CD58-204ENST00000464088 ARVCFO00192 962 aa23.84■■□□□ 1.41
CD58-204ENST00000464088 ASGR1P07306 291 aa23.84■■□□□ 1.41
CD58-204ENST00000464088 NR3C2P08235 984 aa23.84■■□□□ 1.41
CD58-204ENST00000464088 PGM5Q15124 567 aa23.84■■□□□ 1.41
CD58-204ENST00000464088 NPY5RQ15761 445 aa23.84■■□□□ 1.41
CD58-204ENST00000464088 FAM126BQ8IXS8 530 aa23.84■■□□□ 1.41
CD58-204ENST00000464088 IL31RAQ8NI17 732 aa23.84■■□□□ 1.41
CD58-204ENST00000464088 HERVK_113Q902F9 699 aa23.84■■□□□ 1.41
CD58-204ENST00000464088 WASF1Q92558 559 aa23.84■■□□□ 1.41
CD58-204ENST00000464088 UPF3AQ9H1J1 476 aaKnown RBP23.84■■□□□ 1.41
CD58-204ENST00000464088 C6orf50Q9HD87 102 aa23.84■■□□□ 1.41
CD58-204ENST00000464088 A0A0U1RQG5 324 aaPredicted RBP23.83■■□□□ 1.41
CD58-204ENST00000464088 B4DLN1 442 aa23.83■■□□□ 1.41
CD58-204ENST00000464088 GNA11P29992 359 aa23.83■■□□□ 1.41
CD58-204ENST00000464088 PDE4DQ08499 809 aa23.83■■□□□ 1.41
CD58-204ENST00000464088 TAPT1Q6NXT6 567 aa23.83■■□□□ 1.41
CD58-204ENST00000464088 VSIG10LQ86VR7 867 aa23.83■■□□□ 1.41
CD58-204ENST00000464088 FBXO16Q8IX29 292 aaPredicted RBP23.83■■□□□ 1.41
CD58-204ENST00000464088 SNX21Q969T3 373 aa23.83■■□□□ 1.41
CD58-204ENST00000464088 MPHOSPH6Q99547 160 aaKnown RBP23.83■■□□□ 1.41
CD58-204ENST00000464088 ALG1Q9BT22 464 aa23.83■■□□□ 1.41
CD58-204ENST00000464088 VTA1Q9NP79 307 aa23.83■■□□□ 1.41
CD58-204ENST00000464088 GJB4Q9NTQ9 266 aa23.83■■□□□ 1.41
CD58-204ENST00000464088 MSRAQ9UJ68 235 aa23.83■■□□□ 1.41
CD58-204ENST00000464088 ZHX1Q9UKY1 873 aaPredicted RBP23.83■■□□□ 1.41
CD58-204ENST00000464088 PCDHA6Q9UN73 950 aa23.83■■□□□ 1.41
CD58-204ENST00000464088 PCDHA8Q9Y5H6 950 aa23.83■■□□□ 1.41
CD58-204ENST00000464088 ADCY6O43306 1168 aa23.82■■□□□ 1.4
CD58-204ENST00000464088 ACRP10323 421 aa23.82■■□□□ 1.4
CD58-204ENST00000464088 GJA9P57773 515 aa23.82■■□□□ 1.4
CD58-204ENST00000464088 NKX3-2P78367 333 aa23.82■■□□□ 1.4
CD58-204ENST00000464088 EEPD1Q7L9B9 569 aa23.82■■□□□ 1.4
CD58-204ENST00000464088 PHF20Q9BVI0 1012 aa23.82■■□□□ 1.4
CD58-204ENST00000464088 IL23AQ9NPF7 189 aa23.82■■□□□ 1.4
CD58-204ENST00000464088 TMEM260Q9NX78 707 aa23.82■■□□□ 1.4
CD58-204ENST00000464088 XIRP2A4UGR9 3374 aa23.81■■□□□ 1.4
CD58-204ENST00000464088 RBM47A0AV96 593 aaKnown RBP23.81■■□□□ 1.4
CD58-204ENST00000464088 M0R2N6 131 aa23.81■■□□□ 1.4
CD58-204ENST00000464088 FOSP01100 380 aaPredicted RBP23.81■■□□□ 1.4
CD58-204ENST00000464088 CD4P01730 458 aa23.81■■□□□ 1.4
CD58-204ENST00000464088 C6orf222P0C671 652 aaPredicted RBP23.81■■□□□ 1.4
CD58-204ENST00000464088 NLRP5P59047 1200 aa23.81■■□□□ 1.4
CD58-204ENST00000464088 IRX5P78411 483 aaPredicted RBP23.81■■□□□ 1.4
CD58-204ENST00000464088 HMGN5P82970 282 aaKnown RBP23.81■■□□□ 1.4
CD58-204ENST00000464088 AP3B2Q13367 1082 aa23.81■■□□□ 1.4
CD58-204ENST00000464088 CUL4AQ13619 759 aa23.81■■□□□ 1.4
CD58-204ENST00000464088 CCDC85BQ15834 202 aaPredicted RBP23.81■■□□□ 1.4
CD58-204ENST00000464088 DAGLBQ8NCG7 672 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms