RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 DHX16O60231 1041 aaKnown RBP20.14■□□□□ 0.81
HMGN1-210ENST00000464078 PPFIA4O75335 1185 aa20.14■□□□□ 0.81
HMGN1-210ENST00000464078 RGS20O76081 388 aa20.14■□□□□ 0.81
HMGN1-210ENST00000464078 MYSM1Q5VVJ2 828 aa20.14■□□□□ 0.81
HMGN1-210ENST00000464078 KCNV1Q6PIU1 500 aa20.14■□□□□ 0.81
HMGN1-210ENST00000464078 STOX1Q6ZVD7 989 aa20.14■□□□□ 0.81
HMGN1-210ENST00000464078 WNT8BQ93098 351 aa20.14■□□□□ 0.81
HMGN1-210ENST00000464078 MTMR8Q96EF0 704 aa20.14■□□□□ 0.81
HMGN1-210ENST00000464078 PDCD2LQ9BRP1 358 aa20.14■□□□□ 0.81
HMGN1-210ENST00000464078 LRFN3Q9BTN0 628 aa20.14■□□□□ 0.81
HMGN1-210ENST00000464078 DSCC1Q9BVC3 393 aa20.14■□□□□ 0.81
HMGN1-210ENST00000464078 AMNQ9BXJ7 453 aa20.14■□□□□ 0.81
HMGN1-210ENST00000464078 EPHX3Q9H6B9 360 aa20.14■□□□□ 0.81
HMGN1-210ENST00000464078 LGR5O75473 907 aa20.13■□□□□ 0.81
HMGN1-210ENST00000464078 CFBP00751 764 aa20.13■□□□□ 0.81
HMGN1-210ENST00000464078 AAMPQ13685 434 aa20.13■□□□□ 0.81
HMGN1-210ENST00000464078 ZNF618Q5T7W0 954 aa20.13■□□□□ 0.81
HMGN1-210ENST00000464078 SERINC5Q86VE9 423 aa20.13■□□□□ 0.81
HMGN1-210ENST00000464078 DHX37Q8IY37 1157 aaKnown RBP20.13■□□□□ 0.81
HMGN1-210ENST00000464078 SAMD3Q8N6K7 520 aa20.13■□□□□ 0.81
HMGN1-210ENST00000464078 ALG1Q9BT22 464 aa20.13■□□□□ 0.81
HMGN1-210ENST00000464078 ZSWIM5Q9P217 1185 aa20.13■□□□□ 0.81
HMGN1-210ENST00000464078 MUC6Q6W4X9 2439 aa20.13■□□□□ 0.81
HMGN1-210ENST00000464078 HOXC8P31273 242 aa20.12■□□□□ 0.81
HMGN1-210ENST00000464078 IMMTQ16891 758 aaKnown RBP20.12■□□□□ 0.81
HMGN1-210ENST00000464078 TMEM31Q5JXX7 168 aa20.12■□□□□ 0.81
HMGN1-210ENST00000464078 KRT23Q9C075 422 aa20.12■□□□□ 0.81
HMGN1-210ENST00000464078 CNNM2Q9H8M5 875 aa20.12■□□□□ 0.81
HMGN1-210ENST00000464078 DIAPH3Q9NSV4 1193 aa20.12■□□□□ 0.81
HMGN1-210ENST00000464078 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.11■□□□□ 0.81
HMGN1-210ENST00000464078 HIP1O00291 1037 aa20.11■□□□□ 0.81
HMGN1-210ENST00000464078 PPP1R11O60927 126 aaPredicted RBP20.11■□□□□ 0.81
HMGN1-210ENST00000464078 TGFB3P10600 412 aa20.11■□□□□ 0.81
HMGN1-210ENST00000464078 HTRA4P83105 476 aaPredicted RBP20.11■□□□□ 0.81
HMGN1-210ENST00000464078 HIC1Q14526 733 aa20.11■□□□□ 0.81
HMGN1-210ENST00000464078 HSDL1Q3SXM5 330 aa20.11■□□□□ 0.81
HMGN1-210ENST00000464078 CELF3Q5SZQ8 465 aaKnown RBP20.11■□□□□ 0.81
HMGN1-210ENST00000464078 CWC27Q6UX04 472 aaKnown RBP20.11■□□□□ 0.81
HMGN1-210ENST00000464078 VSIG10LQ86VR7 867 aa20.11■□□□□ 0.81
HMGN1-210ENST00000464078 PLEKHM2Q8IWE5 1019 aa20.11■□□□□ 0.81
HMGN1-210ENST00000464078 SP7Q8TDD2 431 aaPredicted RBP20.11■□□□□ 0.81
HMGN1-210ENST00000464078 UBAC1Q9BSL1 405 aa20.11■□□□□ 0.81
HMGN1-210ENST00000464078 UBE2ZQ9H832 354 aaPredicted RBP20.11■□□□□ 0.81
HMGN1-210ENST00000464078 MTUS1Q9ULD2 1270 aa20.11■□□□□ 0.81
HMGN1-210ENST00000464078 HCN4Q9Y3Q4 1203 aa20.11■□□□□ 0.81
HMGN1-210ENST00000464078 INSL6Q9Y581 213 aa20.11■□□□□ 0.81
HMGN1-210ENST00000464078 ZBTB5O15062 677 aa20.1■□□□□ 0.81
HMGN1-210ENST00000464078 GPR37L1O60883 481 aa20.1■□□□□ 0.81
HMGN1-210ENST00000464078 UBA1P22314 1058 aaKnown RBP20.1■□□□□ 0.81
HMGN1-210ENST00000464078 HOXD11P31277 338 aaPredicted RBP20.1■□□□□ 0.81
HMGN1-210ENST00000464078 PGM5Q15124 567 aa20.1■□□□□ 0.81
HMGN1-210ENST00000464078 STAG2Q8N3U4 1231 aa20.1■□□□□ 0.81
HMGN1-210ENST00000464078 SPATA33Q96N06 139 aa20.1■□□□□ 0.81
HMGN1-210ENST00000464078 C16orf70Q9BSU1 422 aa20.1■□□□□ 0.81
HMGN1-210ENST00000464078 VAT1LQ9HCJ6 419 aa20.1■□□□□ 0.81
HMGN1-210ENST00000464078 C11orf16Q9NQ32 467 aa20.1■□□□□ 0.81
HMGN1-210ENST00000464078 CTNNA3Q9UI47 895 aa20.1■□□□□ 0.81
HMGN1-210ENST00000464078 KLRF2D3W0D1 207 aa20.09■□□□□ 0.81
HMGN1-210ENST00000464078 GGPS1O95749 300 aa20.09■□□□□ 0.81
HMGN1-210ENST00000464078 ZNF200P98182 395 aaPredicted RBP20.09■□□□□ 0.81
HMGN1-210ENST00000464078 SEC23AQ15436 765 aa20.09■□□□□ 0.81
HMGN1-210ENST00000464078 LEXMQ3ZCV2 418 aa20.09■□□□□ 0.81
HMGN1-210ENST00000464078 IFIT1BQ5T764 474 aaKnown RBP20.09■□□□□ 0.81
HMGN1-210ENST00000464078 CHD1LQ86WJ1 897 aa20.09■□□□□ 0.81
HMGN1-210ENST00000464078 IL31RAQ8NI17 732 aa20.09■□□□□ 0.81
HMGN1-210ENST00000464078 KHSRPQ92945 711 aaKnown RBP eCLIP20.09■□□□□ 0.811e-7■■□□□ 13.3
HMGN1-210ENST00000464078 PCDHA1Q9Y5I3 950 aa20.09■□□□□ 0.81
HMGN1-210ENST00000464078 RSPH10B2B2RC85 870 aa20.08■□□□□ 0.81
HMGN1-210ENST00000464078 CAND2O75155 1236 aa20.08■□□□□ 0.81
HMGN1-210ENST00000464078 AMHP03971 560 aa20.08■□□□□ 0.81
HMGN1-210ENST00000464078 RSPH10BP0C881 870 aa20.08■□□□□ 0.81
HMGN1-210ENST00000464078 MYCLP12524 364 aaPredicted RBP20.08■□□□□ 0.81
HMGN1-210ENST00000464078 TRAF1Q13077 416 aa20.08■□□□□ 0.81
HMGN1-210ENST00000464078 PLEKHG4Q58EX7 1191 aa20.08■□□□□ 0.81
HMGN1-210ENST00000464078 FBXO22Q8NEZ5 403 aa20.08■□□□□ 0.81
HMGN1-210ENST00000464078 DBF4BQ8NFT6 615 aa20.08■□□□□ 0.81
HMGN1-210ENST00000464078 MAD2L2Q9UI95 211 aa20.08■□□□□ 0.81
HMGN1-210ENST00000464078 PALM3A6NDB9 673 aaPredicted RBP20.07■□□□□ 0.8
HMGN1-210ENST00000464078 PI4K2BG5E9Z4 385 aa20.07■□□□□ 0.8
HMGN1-210ENST00000464078 HOXA13P31271 388 aaPredicted RBP20.07■□□□□ 0.8
HMGN1-210ENST00000464078 THPOP40225 353 aa20.07■□□□□ 0.8
HMGN1-210ENST00000464078 SP2Q02086 613 aa20.07■□□□□ 0.8
HMGN1-210ENST00000464078 NUCB1Q02818 461 aa20.07■□□□□ 0.8
HMGN1-210ENST00000464078 FAM117BQ6P1L5 589 aa20.07■□□□□ 0.8
HMGN1-210ENST00000464078 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.07■□□□□ 0.81e-8■■■□□ 16.2
HMGN1-210ENST00000464078 SAMD11Q96NU1 681 aa20.07■□□□□ 0.8
HMGN1-210ENST00000464078 C17orf80Q9BSJ5 609 aa20.07■□□□□ 0.8
HMGN1-210ENST00000464078 CD320Q9NPF0 282 aa20.07■□□□□ 0.8
HMGN1-210ENST00000464078 RALGAPA2Q2PPJ7 1873 aa20.07■□□□□ 0.8
HMGN1-210ENST00000464078 FRMPD4Q14CM0 1322 aa20.06■□□□□ 0.8
HMGN1-210ENST00000464078 H3BRB1 525 aa20.06■□□□□ 0.8
HMGN1-210ENST00000464078 CCND2P30279 289 aa20.06■□□□□ 0.8
HMGN1-210ENST00000464078 NLRC5Q86WI3 1866 aa20.06■□□□□ 0.8
HMGN1-210ENST00000464078 FAM178BQ8IXR5 827 aa20.06■□□□□ 0.8
HMGN1-210ENST00000464078 MYOCDQ8IZQ8 938 aa20.06■□□□□ 0.8
HMGN1-210ENST00000464078 ATP6V0A1Q93050 837 aa20.06■□□□□ 0.8
HMGN1-210ENST00000464078 MRPL38Q96DV4 380 aaKnown RBP20.06■□□□□ 0.8
HMGN1-210ENST00000464078 RWDD1Q9H446 243 aaPredicted RBP20.06■□□□□ 0.8
HMGN1-210ENST00000464078 TUT1Q9H6E5 874 aaKnown RBP20.06■□□□□ 0.8
HMGN1-210ENST00000464078 C17orf102A2RUQ5 167 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms