RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 CCDC196A0A1B0GTZ2 297 aa14.9□□□□□ -0.02
XRN1-203ENST00000463916 SPATA31C2B4DYI2 1134 aa14.9□□□□□ -0.02
XRN1-203ENST00000463916 KPNA6O60684 536 aa14.9□□□□□ -0.02
XRN1-203ENST00000463916 GGPS1O95749 300 aa14.9□□□□□ -0.02
XRN1-203ENST00000463916 TGFB3P10600 412 aa14.9□□□□□ -0.02
XRN1-203ENST00000463916 LAMC2Q13753 1193 aa14.9□□□□□ -0.02
XRN1-203ENST00000463916 PKN1Q16512 942 aa14.9□□□□□ -0.02
XRN1-203ENST00000463916 KCNV1Q6PIU1 500 aa14.9□□□□□ -0.02
XRN1-203ENST00000463916 PPTC7Q8NI37 304 aa14.9□□□□□ -0.02
XRN1-203ENST00000463916 PPP1R12CQ9BZL4 782 aa14.9□□□□□ -0.02
XRN1-203ENST00000463916 PCDHA6Q9UN73 950 aa14.9□□□□□ -0.02
XRN1-203ENST00000463916 TELO2Q9Y4R8 837 aa14.9□□□□□ -0.02
XRN1-203ENST00000463916 PCDHA8Q9Y5H6 950 aa14.9□□□□□ -0.02
XRN1-203ENST00000463916 ICAM3P32942 547 aa14.89□□□□□ -0.03
XRN1-203ENST00000463916 CYP2C18P33260 490 aa14.89□□□□□ -0.03
XRN1-203ENST00000463916 CHMP4BP1P59074 171 aa14.89□□□□□ -0.03
XRN1-203ENST00000463916 PFKFB3Q16875 520 aaPredicted RBP14.89□□□□□ -0.03
XRN1-203ENST00000463916 LRIT3Q3SXY7 679 aa14.89□□□□□ -0.03
XRN1-203ENST00000463916 PGBD1Q96JS3 809 aa14.89□□□□□ -0.03
XRN1-203ENST00000463916 RIC8AQ9NPQ8 531 aa14.89□□□□□ -0.03
XRN1-203ENST00000463916 CDH23Q9H251 3354 aa14.89□□□□□ -0.03
XRN1-203ENST00000463916 COL6A3P12111 3177 aa14.89□□□□□ -0.03
XRN1-203ENST00000463916 SMCO2A6NFE2 343 aa14.89□□□□□ -0.03
XRN1-203ENST00000463916 TLR3O15455 904 aaKnown RBP14.89□□□□□ -0.03
XRN1-203ENST00000463916 STAM2O75886 525 aa14.89□□□□□ -0.03
XRN1-203ENST00000463916 ITGB5P18084 799 aa14.89□□□□□ -0.03
XRN1-203ENST00000463916 DGKDQ16760 1214 aa14.89□□□□□ -0.03
XRN1-203ENST00000463916 MFSD5Q6N075 450 aa14.89□□□□□ -0.03
XRN1-203ENST00000463916 SPATA33Q96N06 139 aa14.89□□□□□ -0.03
XRN1-203ENST00000463916 TMEM260Q9NX78 707 aa14.89□□□□□ -0.03
XRN1-203ENST00000463916 PRPF3O43395 683 aaKnown RBP14.88□□□□□ -0.03
XRN1-203ENST00000463916 ZNF286BP0CG31 522 aa14.88□□□□□ -0.03
XRN1-203ENST00000463916 CYP2C9P11712 490 aa14.88□□□□□ -0.03
XRN1-203ENST00000463916 HOXD8P13378 290 aaPredicted RBP14.88□□□□□ -0.03
XRN1-203ENST00000463916 SCG2P13521 617 aa14.88□□□□□ -0.03
XRN1-203ENST00000463916 GNPTABQ3T906 1256 aa14.88□□□□□ -0.03
XRN1-203ENST00000463916 FAM47CQ5HY64 1035 aa14.88□□□□□ -0.03
XRN1-203ENST00000463916 C16orf59Q7L2K0 433 aa14.88□□□□□ -0.03
XRN1-203ENST00000463916 SEZ6LQ9BYH1 1024 aa14.88□□□□□ -0.03
XRN1-203ENST00000463916 PDRG1Q9NUG6 133 aa14.88□□□□□ -0.03
XRN1-203ENST00000463916 SPDYE3A6NKU9 549 aa14.88□□□□□ -0.03
XRN1-203ENST00000463916 FIBPO43427 364 aa14.88□□□□□ -0.03
XRN1-203ENST00000463916 ATP9AO75110 1047 aa14.88□□□□□ -0.03
XRN1-203ENST00000463916 CSF2RAP15509 400 aa14.88□□□□□ -0.03
XRN1-203ENST00000463916 FPGSQ05932 587 aa14.88□□□□□ -0.03
XRN1-203ENST00000463916 PPP1R18Q6NYC8 613 aa14.88□□□□□ -0.03
XRN1-203ENST00000463916 XRRA1Q6P2D8 792 aa14.88□□□□□ -0.03
XRN1-203ENST00000463916 NFRKBQ6P4R8 1299 aa14.88□□□□□ -0.03
XRN1-203ENST00000463916 CYFIP1Q7L576 1253 aa14.88□□□□□ -0.03
XRN1-203ENST00000463916 NOC4LQ9BVI4 516 aaKnown RBP14.88□□□□□ -0.03
XRN1-203ENST00000463916 HIPK3Q9H422 1215 aa14.88□□□□□ -0.03
XRN1-203ENST00000463916 MLXIPQ9HAP2 919 aa14.88□□□□□ -0.03
XRN1-203ENST00000463916 DOCK5Q9H7D0 1870 aa14.87□□□□□ -0.03
XRN1-203ENST00000463916 PPFIA4O75335 1185 aa14.87□□□□□ -0.03
XRN1-203ENST00000463916 IFNAR1P17181 557 aa14.87□□□□□ -0.03
XRN1-203ENST00000463916 CLK2P49760 499 aaKnown RBP14.87□□□□□ -0.03
XRN1-203ENST00000463916 ADCY7P51828 1080 aa14.87□□□□□ -0.03
XRN1-203ENST00000463916 CYP2W1Q8TAV3 490 aa14.87□□□□□ -0.03
XRN1-203ENST00000463916 ZNF274Q96GC6 653 aaPredicted RBP14.87□□□□□ -0.03
XRN1-203ENST00000463916 CTAGE1Q96RT6 745 aa14.87□□□□□ -0.03
XRN1-203ENST00000463916 SLC26A6Q9BXS9 759 aa14.87□□□□□ -0.03
XRN1-203ENST00000463916 RBAK-RBAKDNI3L0D1 243 aa14.86□□□□□ -0.03
XRN1-203ENST00000463916 hCG_1984214I3L0E3 225 aa14.86□□□□□ -0.03
XRN1-203ENST00000463916 F2P00734 622 aa14.86□□□□□ -0.03
XRN1-203ENST00000463916 CCL23P55773 120 aa14.86□□□□□ -0.03
XRN1-203ENST00000463916 STK3Q13188 491 aa14.86□□□□□ -0.03
XRN1-203ENST00000463916 ZNF713Q8N859 430 aaPredicted RBP14.86□□□□□ -0.03
XRN1-203ENST00000463916 C16orf70Q9BSU1 422 aa14.86□□□□□ -0.03
XRN1-203ENST00000463916 WNT8AQ9H1J5 351 aa14.86□□□□□ -0.03
XRN1-203ENST00000463916 UBIAD1Q9Y5Z9 338 aa14.86□□□□□ -0.03
XRN1-203ENST00000463916 HAS3O00219 553 aa14.86□□□□□ -0.03
XRN1-203ENST00000463916 DTNBO60941 627 aa14.86□□□□□ -0.03
XRN1-203ENST00000463916 ANAPC15P60006 121 aa14.86□□□□□ -0.03
XRN1-203ENST00000463916 GDF6Q6KF10 455 aaPredicted RBP14.86□□□□□ -0.03
XRN1-203ENST00000463916 METTL7BQ6UX53 244 aa14.86□□□□□ -0.03
XRN1-203ENST00000463916 VWCEQ96DN2 955 aa14.86□□□□□ -0.03
XRN1-203ENST00000463916 RNF26Q9BY78 433 aaPredicted RBP14.86□□□□□ -0.03
XRN1-203ENST00000463916 ACRP10323 421 aa14.85□□□□□ -0.03
XRN1-203ENST00000463916 KCNA2P16389 499 aa14.85□□□□□ -0.03
XRN1-203ENST00000463916 PSEN2P49810 448 aa14.85□□□□□ -0.03
XRN1-203ENST00000463916 NEDD9Q14511 834 aa14.85□□□□□ -0.03
XRN1-203ENST00000463916 HIC1Q14526 733 aa14.85□□□□□ -0.03
XRN1-203ENST00000463916 KIAA0753Q2KHM9 967 aa14.85□□□□□ -0.03
XRN1-203ENST00000463916 JAKMIP3Q5VZ66 844 aa14.85□□□□□ -0.03
XRN1-203ENST00000463916 IL17RAQ96F46 866 aa14.85□□□□□ -0.03
XRN1-203ENST00000463916 GPR20Q99678 358 aa14.85□□□□□ -0.03
XRN1-203ENST00000463916 SENP7Q9BQF6 1050 aa14.85□□□□□ -0.03
XRN1-203ENST00000463916 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.85□□□□□ -0.03
XRN1-203ENST00000463916 ALG1Q9BT22 464 aa14.85□□□□□ -0.03
XRN1-203ENST00000463916 ANO3Q9BYT9 981 aa14.85□□□□□ -0.03
XRN1-203ENST00000463916 ZMYND12Q9H0C1 365 aa14.85□□□□□ -0.03
XRN1-203ENST00000463916 HDAC6Q9UBN7 1215 aa14.85□□□□□ -0.03
XRN1-203ENST00000463916 TPCN1Q9ULQ1 816 aa14.85□□□□□ -0.03
XRN1-203ENST00000463916 SUPT20HL2P0C7V6 817 aa14.85□□□□□ -0.03
XRN1-203ENST00000463916 PTPN11Q06124 597 aaPredicted RBP14.85□□□□□ -0.03
XRN1-203ENST00000463916 MFSD10Q14728 455 aa14.85□□□□□ -0.03
XRN1-203ENST00000463916 NLRX1Q86UT6 975 aa14.85□□□□□ -0.03
XRN1-203ENST00000463916 SESTD1Q86VW0 696 aa14.85□□□□□ -0.03
XRN1-203ENST00000463916 GPRASP2Q96D09 838 aa14.85□□□□□ -0.03
XRN1-203ENST00000463916 SCLYQ96I15 445 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms