RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 YBX2Q9Y2T7 364 aaKnown RBP21.77■■□□□ 1.08
SF3A1-205ENST00000463818 HAS3O00219 553 aa21.76■■□□□ 1.07
SF3A1-205ENST00000463818 ZNF286BP0CG31 522 aa21.76■■□□□ 1.07
SF3A1-205ENST00000463818 CALM1P0DP23 149 aa21.76■■□□□ 1.07
SF3A1-205ENST00000463818 CALM2P0DP24 149 aa21.76■■□□□ 1.07
SF3A1-205ENST00000463818 CALM3P0DP25 149 aa21.76■■□□□ 1.07
SF3A1-205ENST00000463818 ACTN1P12814 892 aa21.76■■□□□ 1.07
SF3A1-205ENST00000463818 HOXD8P13378 290 aaPredicted RBP21.76■■□□□ 1.07
SF3A1-205ENST00000463818 UBA1P22314 1058 aaKnown RBP21.76■■□□□ 1.07
SF3A1-205ENST00000463818 MRPS9P82933 396 aaKnown RBP21.76■■□□□ 1.07
SF3A1-205ENST00000463818 KIAA0753Q2KHM9 967 aa21.76■■□□□ 1.07
SF3A1-205ENST00000463818 USP17L6PQ6QN14 398 aa21.76■■□□□ 1.07
SF3A1-205ENST00000463818 RAB11FIP4Q86YS3 637 aa21.76■■□□□ 1.07
SF3A1-205ENST00000463818 CCDC155Q8N6L0 562 aa21.76■■□□□ 1.07
SF3A1-205ENST00000463818 CUL5Q93034 780 aa21.76■■□□□ 1.07
SF3A1-205ENST00000463818 BCAS3Q9H6U6 928 aa21.76■■□□□ 1.07
SF3A1-205ENST00000463818 RTEL1Q9NZ71 1219 aa21.76■■□□□ 1.07
SF3A1-205ENST00000463818 SLC12A7Q9Y666 1083 aa21.76■■□□□ 1.07
SF3A1-205ENST00000463818 MYH6P13533 1939 aa21.75■■□□□ 1.07
SF3A1-205ENST00000463818 F2P00734 622 aa21.75■■□□□ 1.07
SF3A1-205ENST00000463818 ATP2A2P16615 1042 aaKnown RBP21.75■■□□□ 1.07
SF3A1-205ENST00000463818 SMARCC2Q8TAQ2 1214 aa21.75■■□□□ 1.07
SF3A1-205ENST00000463818 CAGE1Q8TC20 777 aa21.75■■□□□ 1.07
SF3A1-205ENST00000463818 DHX38Q92620 1227 aaKnown RBP21.75■■□□□ 1.07
SF3A1-205ENST00000463818 PRDM12Q9H4Q4 367 aa21.75■■□□□ 1.07
SF3A1-205ENST00000463818 SLC28A3Q9HAS3 691 aa21.75■■□□□ 1.07
SF3A1-205ENST00000463818 A0A0C4DFX4 3053 aa21.74■■□□□ 1.07
SF3A1-205ENST00000463818 MEIS2O14770 477 aa21.74■■□□□ 1.07
SF3A1-205ENST00000463818 STAM2O75886 525 aa21.74■■□□□ 1.07
SF3A1-205ENST00000463818 MYOGP15173 224 aa21.74■■□□□ 1.07
SF3A1-205ENST00000463818 ICAM3P32942 547 aa21.74■■□□□ 1.07
SF3A1-205ENST00000463818 GNPTABQ3T906 1256 aa21.74■■□□□ 1.07
SF3A1-205ENST00000463818 RNF20Q5VTR2 975 aa21.74■■□□□ 1.07
SF3A1-205ENST00000463818 CCDC82Q8N4S0 544 aa21.74■■□□□ 1.07
SF3A1-205ENST00000463818 FANCBQ8NB91 859 aa21.74■■□□□ 1.07
SF3A1-205ENST00000463818 AFAP1L1Q8TED9 768 aa21.74■■□□□ 1.07
SF3A1-205ENST00000463818 INPP4AQ96PE3 977 aaPredicted RBP21.74■■□□□ 1.07
SF3A1-205ENST00000463818 FRMPD4Q14CM0 1322 aa21.74■■□□□ 1.07
SF3A1-205ENST00000463818 SPATA31C2B4DYI2 1134 aa21.73■■□□□ 1.07
SF3A1-205ENST00000463818 PIK3CDO00329 1044 aa21.73■■□□□ 1.07
SF3A1-205ENST00000463818 SELPP16109 830 aa21.73■■□□□ 1.07
SF3A1-205ENST00000463818 ZNF200P98182 395 aaPredicted RBP21.73■■□□□ 1.07
SF3A1-205ENST00000463818 NEK1Q96PY6 1258 aa21.73■■□□□ 1.07
SF3A1-205ENST00000463818 GAS2L1Q99501 681 aaPredicted RBP21.73■■□□□ 1.07
SF3A1-205ENST00000463818 C16orf70Q9BSU1 422 aa21.73■■□□□ 1.07
SF3A1-205ENST00000463818 PCDHA11Q9Y5I1 949 aa21.73■■□□□ 1.07
SF3A1-205ENST00000463818 hCG_1642624A0A1W2PR95 340 aa21.72■■□□□ 1.07
SF3A1-205ENST00000463818 SEMA3FQ13275 785 aa21.72■■□□□ 1.07
SF3A1-205ENST00000463818 PTK7Q13308 1070 aa21.72■■□□□ 1.07
SF3A1-205ENST00000463818 NEDD9Q14511 834 aa21.72■■□□□ 1.07
SF3A1-205ENST00000463818 GPNMBQ14956 572 aa21.72■■□□□ 1.07
SF3A1-205ENST00000463818 SYNE3Q6ZMZ3 975 aa21.72■■□□□ 1.07
SF3A1-205ENST00000463818 SGMS1Q86VZ5 419 aa21.72■■□□□ 1.07
SF3A1-205ENST00000463818 PSTPIP2Q9H939 334 aa21.72■■□□□ 1.07
SF3A1-205ENST00000463818 CKBP12277 381 aa21.71■■□□□ 1.07
SF3A1-205ENST00000463818 EXOSC10Q01780 885 aaKnown RBP21.71■■□□□ 1.07
SF3A1-205ENST00000463818 RBL2Q08999 1139 aa21.71■■□□□ 1.07
SF3A1-205ENST00000463818 PCNX4Q63HM2 1172 aa21.71■■□□□ 1.07
SF3A1-205ENST00000463818 XRRA1Q6P2D8 792 aa21.71■■□□□ 1.07
SF3A1-205ENST00000463818 TMTC3Q6ZXV5 915 aa21.71■■□□□ 1.07
SF3A1-205ENST00000463818 LRRC8DQ7L1W4 858 aa21.71■■□□□ 1.07
SF3A1-205ENST00000463818 CYFIP1Q7L576 1253 aa21.71■■□□□ 1.07
SF3A1-205ENST00000463818 RASEFQ8IZ41 740 aa21.71■■□□□ 1.07
SF3A1-205ENST00000463818 KIAA1217Q5T5P2 1943 aa21.7■■□□□ 1.07
SF3A1-205ENST00000463818 NOP56O00567 594 aaKnown RBP21.7■■□□□ 1.06
SF3A1-205ENST00000463818 FIBPO43427 364 aa21.7■■□□□ 1.06
SF3A1-205ENST00000463818 CDC45O75419 566 aa21.7■■□□□ 1.06
SF3A1-205ENST00000463818 ADGRE1Q14246 886 aa21.7■■□□□ 1.06
SF3A1-205ENST00000463818 HIC1Q14526 733 aa21.7■■□□□ 1.06
SF3A1-205ENST00000463818 TSGA10IPQ3SY00 556 aa21.7■■□□□ 1.06
SF3A1-205ENST00000463818 METTL7BQ6UX53 244 aa21.7■■□□□ 1.06
SF3A1-205ENST00000463818 MICU3Q86XE3 530 aa21.7■■□□□ 1.06
SF3A1-205ENST00000463818 PHOSPHO2Q8TCD6 241 aa21.7■■□□□ 1.06
SF3A1-205ENST00000463818 H3BRB1 525 aa21.69■■□□□ 1.06
SF3A1-205ENST00000463818 PARNO95453 639 aaKnown RBP21.69■■□□□ 1.06
SF3A1-205ENST00000463818 LGALS2P05162 132 aa21.69■■□□□ 1.06
SF3A1-205ENST00000463818 TRIM71Q2Q1W2 868 aaKnown RBP21.69■■□□□ 1.06
SF3A1-205ENST00000463818 PPP2R2DQ66LE6 453 aa21.69■■□□□ 1.06
SF3A1-205ENST00000463818 DHX32Q7L7V1 743 aaKnown RBP21.69■■□□□ 1.06
SF3A1-205ENST00000463818 NLRX1Q86UT6 975 aa21.69■■□□□ 1.06
SF3A1-205ENST00000463818 USP38Q8NB14 1042 aa21.69■■□□□ 1.06
SF3A1-205ENST00000463818 WNT8BQ93098 351 aa21.69■■□□□ 1.06
SF3A1-205ENST00000463818 TCEANC2Q96MN5 208 aa21.69■■□□□ 1.06
SF3A1-205ENST00000463818 SLC9A7Q96T83 725 aa21.69■■□□□ 1.06
SF3A1-205ENST00000463818 COL25A1Q9BXS0 654 aaPredicted RBP21.69■■□□□ 1.06
SF3A1-205ENST00000463818 TUT1Q9H6E5 874 aaKnown RBP21.69■■□□□ 1.06
SF3A1-205ENST00000463818 NBNO60934 754 aa21.68■■□□□ 1.06
SF3A1-205ENST00000463818 BAIAP3O94812 1187 aa21.68■■□□□ 1.06
SF3A1-205ENST00000463818 ADCK5Q3MIX3 580 aa21.68■■□□□ 1.06
SF3A1-205ENST00000463818 ZNF618Q5T7W0 954 aa21.68■■□□□ 1.06
SF3A1-205ENST00000463818 APOA5Q6Q788 366 aa21.68■■□□□ 1.06
SF3A1-205ENST00000463818 PPM1EQ8WY54 764 aa21.68■■□□□ 1.06
SF3A1-205ENST00000463818 GPR20Q99678 358 aa21.68■■□□□ 1.06
SF3A1-205ENST00000463818 SENP7Q9BQF6 1050 aa21.68■■□□□ 1.06
SF3A1-205ENST00000463818 USP26Q9BXU7 913 aa21.68■■□□□ 1.06
SF3A1-205ENST00000463818 BRPF3Q9ULD4 1205 aa21.68■■□□□ 1.06
SF3A1-205ENST00000463818 TELO2Q9Y4R8 837 aa21.68■■□□□ 1.06
SF3A1-205ENST00000463818 C17orf102A2RUQ5 167 aa21.67■■□□□ 1.06
SF3A1-205ENST00000463818 CXCL10P02778 98 aa21.67■■□□□ 1.06
SF3A1-205ENST00000463818 IGFBP4P22692 258 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms