RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 RXRAP19793 462 aa25.57■■□□□ 1.68
PDLIM7-206ENST00000463411 UBA1P22314 1058 aaKnown RBP25.57■■□□□ 1.68
PDLIM7-206ENST00000463411 MFSD10Q14728 455 aa25.57■■□□□ 1.68
PDLIM7-206ENST00000463411 GRIN2CQ14957 1233 aa25.57■■□□□ 1.68
PDLIM7-206ENST00000463411 MYSM1Q5VVJ2 828 aa25.57■■□□□ 1.68
PDLIM7-206ENST00000463411 GDF6Q6KF10 455 aaPredicted RBP25.57■■□□□ 1.68
PDLIM7-206ENST00000463411 SYNE3Q6ZMZ3 975 aa25.57■■□□□ 1.68
PDLIM7-206ENST00000463411 SKAP1Q86WV1 359 aa25.57■■□□□ 1.68
PDLIM7-206ENST00000463411 ALG1Q9BT22 464 aa25.57■■□□□ 1.68
PDLIM7-206ENST00000463411 MLXIPQ9HAP2 919 aa25.57■■□□□ 1.68
PDLIM7-206ENST00000463411 SORBS3O60504 671 aa25.56■■□□□ 1.68
PDLIM7-206ENST00000463411 IQCF3P0C7M6 154 aa25.56■■□□□ 1.68
PDLIM7-206ENST00000463411 KIAA0753Q2KHM9 967 aa25.56■■□□□ 1.68
PDLIM7-206ENST00000463411 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.56■■□□□ 1.68
PDLIM7-206ENST00000463411 AFAP1L1Q8TED9 768 aa25.56■■□□□ 1.68
PDLIM7-206ENST00000463411 GTF2IRD1Q9UHL9 959 aa25.56■■□□□ 1.68
PDLIM7-206ENST00000463411 PPFIA4O75335 1185 aa25.55■■□□□ 1.68
PDLIM7-206ENST00000463411 HOXD8P13378 290 aaPredicted RBP25.55■■□□□ 1.68
PDLIM7-206ENST00000463411 SRBD1Q8N5C6 995 aaKnown RBP25.55■■□□□ 1.68
PDLIM7-206ENST00000463411 ZFP91Q96JP5 570 aaPredicted RBP25.55■■□□□ 1.68
PDLIM7-206ENST00000463411 LRRC2Q9BYS8 371 aa25.55■■□□□ 1.68
PDLIM7-206ENST00000463411 FTOQ9C0B1 505 aaKnown RBP eCLIP25.55■■□□□ 1.68
PDLIM7-206ENST00000463411 HDAC6Q9UBN7 1215 aa25.55■■□□□ 1.68
PDLIM7-206ENST00000463411 PIK3CDO00329 1044 aa25.54■■□□□ 1.68
PDLIM7-206ENST00000463411 DLL1O00548 723 aa25.54■■□□□ 1.68
PDLIM7-206ENST00000463411 HSDL1Q3SXM5 330 aa25.54■■□□□ 1.68
PDLIM7-206ENST00000463411 SGMS1Q86VZ5 419 aa25.54■■□□□ 1.68
PDLIM7-206ENST00000463411 MICU3Q86XE3 530 aa25.54■■□□□ 1.68
PDLIM7-206ENST00000463411 NEK1Q96PY6 1258 aa25.54■■□□□ 1.68
PDLIM7-206ENST00000463411 GAS2L1Q99501 681 aaPredicted RBP25.54■■□□□ 1.68
PDLIM7-206ENST00000463411 SLC28A3Q9HAS3 691 aa25.54■■□□□ 1.68
PDLIM7-206ENST00000463411 CDH23Q9H251 3354 aa25.54■■□□□ 1.68
PDLIM7-206ENST00000463411 HAS3O00219 553 aa25.53■■□□□ 1.68
PDLIM7-206ENST00000463411 NOP56O00567 594 aaKnown RBP25.53■■□□□ 1.68
PDLIM7-206ENST00000463411 FIBPO43427 364 aa25.53■■□□□ 1.68
PDLIM7-206ENST00000463411 ATP2A2P16615 1042 aaKnown RBP25.53■■□□□ 1.68
PDLIM7-206ENST00000463411 SP2Q02086 613 aa25.53■■□□□ 1.68
PDLIM7-206ENST00000463411 XRRA1Q6P2D8 792 aa25.53■■□□□ 1.68
PDLIM7-206ENST00000463411 USP17L6PQ6QN14 398 aa25.53■■□□□ 1.68
PDLIM7-206ENST00000463411 RAB11FIP4Q86YS3 637 aa25.53■■□□□ 1.68
PDLIM7-206ENST00000463411 CMTR1Q8N1G2 835 aaKnown RBP25.53■■□□□ 1.68
PDLIM7-206ENST00000463411 INPP4AQ96PE3 977 aaPredicted RBP25.53■■□□□ 1.68
PDLIM7-206ENST00000463411 NKX2-4Q9H2Z4 354 aa25.53■■□□□ 1.68
PDLIM7-206ENST00000463411 TRIP12Q14669 1992 aaPredicted RBP25.53■■□□□ 1.68
PDLIM7-206ENST00000463411 SELPP16109 830 aa25.52■■□□□ 1.68
PDLIM7-206ENST00000463411 ICAM3P32942 547 aa25.52■■□□□ 1.68
PDLIM7-206ENST00000463411 MRPS9P82933 396 aaKnown RBP25.52■■□□□ 1.68
PDLIM7-206ENST00000463411 COL9A3Q14050 684 aaPredicted RBP25.52■■□□□ 1.68
PDLIM7-206ENST00000463411 NEDD9Q14511 834 aa25.52■■□□□ 1.68
PDLIM7-206ENST00000463411 PCNX4Q63HM2 1172 aa25.52■■□□□ 1.68
PDLIM7-206ENST00000463411 TMTC3Q6ZXV5 915 aa25.52■■□□□ 1.68
PDLIM7-206ENST00000463411 LRRC8DQ7L1W4 858 aa25.52■■□□□ 1.68
PDLIM7-206ENST00000463411 FANCBQ8NB91 859 aa25.52■■□□□ 1.68
PDLIM7-206ENST00000463411 GPKOWQ92917 476 aaPredicted RBP eCLIP25.52■■□□□ 1.68
PDLIM7-206ENST00000463411 VWCEQ96DN2 955 aa25.52■■□□□ 1.68
PDLIM7-206ENST00000463411 PARNO95453 639 aaKnown RBP25.51■■□□□ 1.67
PDLIM7-206ENST00000463411 KRT32Q14532 448 aa25.51■■□□□ 1.67
PDLIM7-206ENST00000463411 NLRX1Q86UT6 975 aa25.51■■□□□ 1.67
PDLIM7-206ENST00000463411 CTAGE1Q96RT6 745 aa25.51■■□□□ 1.67
PDLIM7-206ENST00000463411 SLC9A7Q96T83 725 aa25.51■■□□□ 1.67
PDLIM7-206ENST00000463411 PSTPIP2Q9H939 334 aa25.51■■□□□ 1.67
PDLIM7-206ENST00000463411 RBM28Q9NW13 759 aaKnown RBP25.51■■□□□ 1.67
PDLIM7-206ENST00000463411 PCDHA11Q9Y5I1 949 aa25.51■■□□□ 1.67
PDLIM7-206ENST00000463411 MEIS2O14770 477 aa25.5■■□□□ 1.67
PDLIM7-206ENST00000463411 RBL2Q08999 1139 aa25.5■■□□□ 1.67
PDLIM7-206ENST00000463411 PTK7Q13308 1070 aa25.5■■□□□ 1.67
PDLIM7-206ENST00000463411 APOA5Q6Q788 366 aa25.5■■□□□ 1.67
PDLIM7-206ENST00000463411 METTL7BQ6UX53 244 aa25.5■■□□□ 1.67
PDLIM7-206ENST00000463411 CCDC82Q8N4S0 544 aa25.5■■□□□ 1.67
PDLIM7-206ENST00000463411 DOCK5Q9H7D0 1870 aa25.5■■□□□ 1.67
PDLIM7-206ENST00000463411 RTEL1Q9NZ71 1219 aa25.5■■□□□ 1.67
PDLIM7-206ENST00000463411 YBX2Q9Y2T7 364 aaKnown RBP25.5■■□□□ 1.67
PDLIM7-206ENST00000463411 SPATA31C2B4DYI2 1134 aa25.49■■□□□ 1.67
PDLIM7-206ENST00000463411 BAIAP3O94812 1187 aa25.49■■□□□ 1.67
PDLIM7-206ENST00000463411 RABGGTBP53611 331 aa25.49■■□□□ 1.67
PDLIM7-206ENST00000463411 PPP2R2DQ66LE6 453 aa25.49■■□□□ 1.67
PDLIM7-206ENST00000463411 DHX32Q7L7V1 743 aaKnown RBP25.49■■□□□ 1.67
PDLIM7-206ENST00000463411 HEATR3Q7Z4Q2 680 aa25.49■■□□□ 1.67
PDLIM7-206ENST00000463411 DHX38Q92620 1227 aaKnown RBP25.49■■□□□ 1.67
PDLIM7-206ENST00000463411 PRDM12Q9H4Q4 367 aa25.49■■□□□ 1.67
PDLIM7-206ENST00000463411 SPDYE3A6NKU9 549 aa25.48■■□□□ 1.67
PDLIM7-206ENST00000463411 LGALS2P05162 132 aa25.48■■□□□ 1.67
PDLIM7-206ENST00000463411 CKBP12277 381 aa25.48■■□□□ 1.67
PDLIM7-206ENST00000463411 TSGA10IPQ3SY00 556 aa25.48■■□□□ 1.67
PDLIM7-206ENST00000463411 CYFIP1Q7L576 1253 aa25.48■■□□□ 1.67
PDLIM7-206ENST00000463411 GIMAP8Q8ND71 665 aaPredicted RBP25.48■■□□□ 1.67
PDLIM7-206ENST00000463411 C16orf70Q9BSU1 422 aa25.48■■□□□ 1.67
PDLIM7-206ENST00000463411 USP26Q9BXU7 913 aa25.48■■□□□ 1.67
PDLIM7-206ENST00000463411 hCG_1642624A0A1W2PR95 340 aa25.47■■□□□ 1.67
PDLIM7-206ENST00000463411 H3BRB1 525 aa25.47■■□□□ 1.67
PDLIM7-206ENST00000463411 ZBTB43O43298 467 aa25.47■■□□□ 1.67
PDLIM7-206ENST00000463411 HMGB1P09429 215 aaKnown RBP25.47■■□□□ 1.67
PDLIM7-206ENST00000463411 KCNJ6P48051 423 aa25.47■■□□□ 1.67
PDLIM7-206ENST00000463411 PHOSPHO2Q8TCD6 241 aa25.47■■□□□ 1.67
PDLIM7-206ENST00000463411 CDHR1Q96JP9 859 aa25.47■■□□□ 1.67
PDLIM7-206ENST00000463411 TUT1Q9H6E5 874 aaKnown RBP25.47■■□□□ 1.67
PDLIM7-206ENST00000463411 EHMT1Q9H9B1 1298 aa25.47■■□□□ 1.67
PDLIM7-206ENST00000463411 CNTNAP5Q8WYK1 1306 aa25.46■■□□□ 1.67
PDLIM7-206ENST00000463411 C17orf102A2RUQ5 167 aa25.46■■□□□ 1.67
PDLIM7-206ENST00000463411 SEMA3FQ13275 785 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms