RNA–Protein interactions for RNA: ENST00000463216.5

TTC3-212, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-212ENST00000463216 CELF3Q5SZQ8 465 aaKnown RBP27.85■■■□□ 2.05
TTC3-212ENST00000463216 MYSM1Q5VVJ2 828 aa27.85■■■□□ 2.05
TTC3-212ENST00000463216 GPKOWQ92917 476 aaPredicted RBP eCLIP27.85■■■□□ 2.053e-8■□□□□ 9.8
TTC3-212ENST00000463216 MYL10Q9BUA6 226 aa27.85■■■□□ 2.05
TTC3-212ENST00000463216 MLXIPQ9HAP2 919 aa27.85■■■□□ 2.05
TTC3-212ENST00000463216 KIF28PB7ZC32 967 aa27.84■■■□□ 2.05
TTC3-212ENST00000463216 RFXAPO00287 272 aa27.84■■■□□ 2.05
TTC3-212ENST00000463216 F2P00734 622 aa27.84■■■□□ 2.05
TTC3-212ENST00000463216 ZNF200P98182 395 aaPredicted RBP27.84■■■□□ 2.05
TTC3-212ENST00000463216 SP2Q02086 613 aa27.84■■■□□ 2.05
TTC3-212ENST00000463216 HERC6Q8IVU3 1022 aa27.84■■■□□ 2.05
TTC3-212ENST00000463216 PHOSPHO2Q8TCD6 241 aa27.84■■■□□ 2.05
TTC3-212ENST00000463216 MAP4K1Q92918 833 aa27.84■■■□□ 2.05
TTC3-212ENST00000463216 THEGQ9P2T0 379 aa27.84■■■□□ 2.05
TTC3-212ENST00000463216 CHD7Q9P2D1 2997 aa27.84■■■□□ 2.05
TTC3-212ENST00000463216 CKBP12277 381 aa27.83■■■□□ 2.05
TTC3-212ENST00000463216 UBA1P22314 1058 aaKnown RBP27.83■■■□□ 2.05
TTC3-212ENST00000463216 CASC1Q6TDU7 716 aa27.83■■■□□ 2.05
TTC3-212ENST00000463216 MB21D2Q8IYB1 491 aaPredicted RBP27.83■■■□□ 2.05
TTC3-212ENST00000463216 CTCFLQ8NI51 663 aaPredicted RBP27.83■■■□□ 2.05
TTC3-212ENST00000463216 IGDCC4Q8TDY8 1250 aa27.83■■■□□ 2.05
TTC3-212ENST00000463216 PPFIA4O75335 1185 aa27.82■■■□□ 2.04
TTC3-212ENST00000463216 BAIAP3O94812 1187 aa27.82■■■□□ 2.04
TTC3-212ENST00000463216 NFXL1Q6ZNB6 911 aa27.82■■■□□ 2.04
TTC3-212ENST00000463216 SPTBN5Q9NRC6 3674 aaKnown RBP27.81■■■□□ 2.04
TTC3-212ENST00000463216 RBAK-RBAKDNI3L0D1 243 aa27.81■■■□□ 2.04
TTC3-212ENST00000463216 HAS3O00219 553 aa27.81■■■□□ 2.04
TTC3-212ENST00000463216 PTK7Q13308 1070 aa27.81■■■□□ 2.04
TTC3-212ENST00000463216 TMCO2Q7Z6W1 182 aaPredicted RBP27.81■■■□□ 2.04
TTC3-212ENST00000463216 ZNF654Q8IZM8 581 aa27.81■■■□□ 2.04
TTC3-212ENST00000463216 ARNTL2Q8WYA1 636 aa27.81■■■□□ 2.04
TTC3-212ENST00000463216 ZBED2Q9BTP6 218 aa27.81■■■□□ 2.04
TTC3-212ENST00000463216 RTEL1Q9NZ71 1219 aa27.81■■■□□ 2.04
TTC3-212ENST00000463216 PRC1O43663 620 aa27.8■■■□□ 2.04
TTC3-212ENST00000463216 TLL1O43897 1013 aa27.8■■■□□ 2.04
TTC3-212ENST00000463216 TGFB3P10600 412 aa27.8■■■□□ 2.04
TTC3-212ENST00000463216 GPNMBQ14956 572 aa27.8■■■□□ 2.04
TTC3-212ENST00000463216 SKIV2LQ15477 1246 aaKnown RBP27.8■■■□□ 2.04
TTC3-212ENST00000463216 SMARCC2Q8TAQ2 1214 aa27.8■■■□□ 2.04
TTC3-212ENST00000463216 ATXN2LQ8WWM7 1075 aaKnown RBP27.8■■■□□ 2.04
TTC3-212ENST00000463216 RRP36Q96EU6 259 aaKnown RBP27.8■■■□□ 2.04
TTC3-212ENST00000463216 LY9Q9HBG7 655 aa27.8■■■□□ 2.04
TTC3-212ENST00000463216 NOP56O00567 594 aaKnown RBP27.79■■■□□ 2.04
TTC3-212ENST00000463216 NBNO60934 754 aa27.79■■■□□ 2.04
TTC3-212ENST00000463216 KIF5BP33176 963 aa27.79■■■□□ 2.04
TTC3-212ENST00000463216 WDR5P61964 334 aaKnown RBP27.79■■■□□ 2.04
TTC3-212ENST00000463216 GNPTABQ3T906 1256 aa27.79■■■□□ 2.04
TTC3-212ENST00000463216 CNKSR3Q6P9H4 555 aa27.79■■■□□ 2.04
TTC3-212ENST00000463216 CUL5Q93034 780 aa27.79■■■□□ 2.04
TTC3-212ENST00000463216 WNT8BQ93098 351 aa27.79■■■□□ 2.04
TTC3-212ENST00000463216 TSPYL2Q9H2G4 693 aaPredicted RBP27.79■■■□□ 2.04
TTC3-212ENST00000463216 BCAS3Q9H6U6 928 aa27.79■■■□□ 2.04
TTC3-212ENST00000463216 SEC63Q9UGP8 760 aaKnown RBP27.79■■■□□ 2.04
TTC3-212ENST00000463216 CCDC69A6NI79 296 aa27.78■■■□□ 2.04
TTC3-212ENST00000463216 GTPBP6O43824 516 aaPredicted RBP27.78■■■□□ 2.04
TTC3-212ENST00000463216 ARHGEF15O94989 841 aa27.78■■■□□ 2.04
TTC3-212ENST00000463216 PARNO95453 639 aaKnown RBP27.78■■■□□ 2.04
TTC3-212ENST00000463216 ZNF618Q5T7W0 954 aa27.78■■■□□ 2.04
TTC3-212ENST00000463216 IL27Q8NEV9 243 aa27.78■■■□□ 2.04
TTC3-212ENST00000463216 EPOPA6NHQ4 379 aa27.77■■■□□ 2.04
TTC3-212ENST00000463216 DDAH1O94760 285 aa27.77■■■□□ 2.04
TTC3-212ENST00000463216 HOXD8P13378 290 aaPredicted RBP27.77■■■□□ 2.04
TTC3-212ENST00000463216 DEFB103AP81534 67 aa27.77■■■□□ 2.04
TTC3-212ENST00000463216 MRPS5P82675 430 aaKnown RBP27.77■■■□□ 2.04
TTC3-212ENST00000463216 MRPS9P82933 396 aaKnown RBP27.77■■■□□ 2.04
TTC3-212ENST00000463216 TAP1Q03518 808 aa27.77■■■□□ 2.04
TTC3-212ENST00000463216 RBL2Q08999 1139 aa27.77■■■□□ 2.04
TTC3-212ENST00000463216 HIC1Q14526 733 aa27.77■■■□□ 2.04
TTC3-212ENST00000463216 USP17L6PQ6QN14 398 aa27.77■■■□□ 2.04
TTC3-212ENST00000463216 ASB2Q96Q27 587 aa27.77■■■□□ 2.04
TTC3-212ENST00000463216 C16orf70Q9BSU1 422 aa27.77■■■□□ 2.04
TTC3-212ENST00000463216 PTPRSQ13332 1948 aa27.77■■■□□ 2.04
TTC3-212ENST00000463216 DOCK5Q9H7D0 1870 aa27.76■■■□□ 2.04
TTC3-212ENST00000463216 C17orf102A2RUQ5 167 aa27.76■■■□□ 2.03
TTC3-212ENST00000463216 H3BRB1 525 aa27.76■■■□□ 2.03
TTC3-212ENST00000463216 RXRAP19793 462 aa27.76■■■□□ 2.03
TTC3-212ENST00000463216 MCM5P33992 734 aa27.76■■■□□ 2.03
TTC3-212ENST00000463216 THPOP40225 353 aa27.76■■■□□ 2.03
TTC3-212ENST00000463216 CYFIP1Q7L576 1253 aa27.76■■■□□ 2.03
TTC3-212ENST00000463216 RAB11FIP4Q86YS3 637 aa27.76■■■□□ 2.03
TTC3-212ENST00000463216 CMTR1Q8N1G2 835 aaKnown RBP27.76■■■□□ 2.03
TTC3-212ENST00000463216 SPZ1Q9BXG8 430 aa27.76■■■□□ 2.03
TTC3-212ENST00000463216 TUT1Q9H6E5 874 aaKnown RBP27.76■■■□□ 2.03
TTC3-212ENST00000463216 PLEKHA8P1O95397 391 aa27.75■■■□□ 2.03
TTC3-212ENST00000463216 CXCL10P02778 98 aa27.75■■■□□ 2.03
TTC3-212ENST00000463216 LGALS2P05162 132 aa27.75■■■□□ 2.03
TTC3-212ENST00000463216 SP4Q02446 784 aa27.75■■■□□ 2.03
TTC3-212ENST00000463216 TCTN1Q2MV58 587 aa27.75■■■□□ 2.03
TTC3-212ENST00000463216 TRIM71Q2Q1W2 868 aaKnown RBP27.75■■■□□ 2.03
TTC3-212ENST00000463216 FAM117BQ6P1L5 589 aa27.75■■■□□ 2.03
TTC3-212ENST00000463216 ATP6V0A1Q93050 837 aa27.75■■■□□ 2.03
TTC3-212ENST00000463216 MAP3K14Q99558 947 aa27.75■■■□□ 2.03
TTC3-212ENST00000463216 LSG1Q9H089 658 aaKnown RBP27.75■■■□□ 2.03
TTC3-212ENST00000463216 LCHNA4D1U4 455 aa27.74■■■□□ 2.03
TTC3-212ENST00000463216 STAM2O75886 525 aa27.74■■■□□ 2.03
TTC3-212ENST00000463216 IKBKEQ14164 716 aa27.74■■■□□ 2.03
TTC3-212ENST00000463216 NEDD9Q14511 834 aa27.74■■■□□ 2.03
TTC3-212ENST00000463216 KRT40Q6A162 431 aa27.74■■■□□ 2.03
TTC3-212ENST00000463216 LRRC2Q9BYS8 371 aa27.74■■■□□ 2.03
TTC3-212ENST00000463216 MTCH2Q9Y6C9 303 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms