RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 SP2Q02086 613 aa23.07■■□□□ 1.28
NUP43-205ENST00000463048 SEMA3FQ13275 785 aa23.07■■□□□ 1.28
NUP43-205ENST00000463048 MTMR1Q13613 665 aa23.07■■□□□ 1.28
NUP43-205ENST00000463048 CCDC62Q6P9F0 684 aa23.07■■□□□ 1.28
NUP43-205ENST00000463048 DIS3LQ8TF46 1054 aaKnown RBP23.07■■□□□ 1.28
NUP43-205ENST00000463048 KIAA0100Q14667 2235 aaKnown RBP23.06■■□□□ 1.28
NUP43-205ENST00000463048 SPATA31C2B4DYI2 1134 aa23.06■■□□□ 1.28
NUP43-205ENST00000463048 FAM86B1E9PN63 330 aa23.06■■□□□ 1.28
NUP43-205ENST00000463048 FIBPO43427 364 aa23.06■■□□□ 1.28
NUP43-205ENST00000463048 FAM86B2P0C5J1 330 aa23.06■■□□□ 1.28
NUP43-205ENST00000463048 ARP10275 920 aa23.06■■□□□ 1.28
NUP43-205ENST00000463048 ATP2B1P20020 1258 aa23.06■■□□□ 1.28
NUP43-205ENST00000463048 UBA1P22314 1058 aaKnown RBP23.06■■□□□ 1.28
NUP43-205ENST00000463048 SP4Q02446 784 aa23.06■■□□□ 1.28
NUP43-205ENST00000463048 LRRC41Q15345 812 aa23.06■■□□□ 1.28
NUP43-205ENST00000463048 LETM2Q2VYF4 491 aa23.06■■□□□ 1.28
NUP43-205ENST00000463048 CEP55Q53EZ4 464 aa23.06■■□□□ 1.28
NUP43-205ENST00000463048 PLA2G4DQ86XP0 818 aa23.06■■□□□ 1.28
NUP43-205ENST00000463048 CRYGNQ8WXF5 182 aa23.06■■□□□ 1.28
NUP43-205ENST00000463048 TNFRSF25Q93038 417 aa23.06■■□□□ 1.28
NUP43-205ENST00000463048 INTS4Q96HW7 963 aaKnown RBP23.06■■□□□ 1.28
NUP43-205ENST00000463048 SPC25Q9HBM1 224 aa23.06■■□□□ 1.28
NUP43-205ENST00000463048 JADE2Q9NQC1 790 aa23.06■■□□□ 1.28
NUP43-205ENST00000463048 DOCK5Q9H7D0 1870 aa23.05■■□□□ 1.28
NUP43-205ENST00000463048 VPS37CA5D8V6 355 aaPredicted RBP23.05■■□□□ 1.28
NUP43-205ENST00000463048 KIF28PB7ZC32 967 aa23.05■■□□□ 1.28
NUP43-205ENST00000463048 EDIL3O43854 480 aa23.05■■□□□ 1.28
NUP43-205ENST00000463048 TDP2O95551 362 aa23.05■■□□□ 1.28
NUP43-205ENST00000463048 GGPS1O95749 300 aa23.05■■□□□ 1.28
NUP43-205ENST00000463048 GH1P01241 217 aa23.05■■□□□ 1.28
NUP43-205ENST00000463048 CYP3A4P08684 503 aa23.05■■□□□ 1.28
NUP43-205ENST00000463048 PRR16Q569H4 304 aa23.05■■□□□ 1.28
NUP43-205ENST00000463048 DHX37Q8IY37 1157 aaKnown RBP23.05■■□□□ 1.28
NUP43-205ENST00000463048 ARRDC4Q8NCT1 418 aa23.05■■□□□ 1.28
NUP43-205ENST00000463048 GPRASP2Q96D09 838 aa23.05■■□□□ 1.28
NUP43-205ENST00000463048 KBTBD13C9JR72 458 aa23.04■■□□□ 1.28
NUP43-205ENST00000463048 ATP9AO75110 1047 aa23.04■■□□□ 1.28
NUP43-205ENST00000463048 ADAMTS4O75173 837 aa23.04■■□□□ 1.28
NUP43-205ENST00000463048 GJA9P57773 515 aa23.04■■□□□ 1.28
NUP43-205ENST00000463048 GNASQ5JWF2 1037 aa23.04■■□□□ 1.28
NUP43-205ENST00000463048 RNF180Q86T96 592 aa23.04■■□□□ 1.28
NUP43-205ENST00000463048 FERMT2Q96AC1 680 aa23.04■■□□□ 1.28
NUP43-205ENST00000463048 KCNH7Q9NS40 1196 aa23.04■■□□□ 1.28
NUP43-205ENST00000463048 NKRFO15226 690 aaKnown RBP eCLIP23.03■■□□□ 1.28
NUP43-205ENST00000463048 FARP2O94887 1054 aaPredicted RBP23.03■■□□□ 1.28
NUP43-205ENST00000463048 ICAM3P32942 547 aa23.03■■□□□ 1.28
NUP43-205ENST00000463048 ARHGAP1Q07960 439 aa23.03■■□□□ 1.28
NUP43-205ENST00000463048 FSCN1Q16658 493 aaKnown RBP23.03■■□□□ 1.28
NUP43-205ENST00000463048 KCNV1Q6PIU1 500 aa23.03■■□□□ 1.28
NUP43-205ENST00000463048 CYFIP1Q7L576 1253 aa23.03■■□□□ 1.28
NUP43-205ENST00000463048 NEK8Q86SG6 692 aa23.03■■□□□ 1.28
NUP43-205ENST00000463048 AFG1LQ8WV93 481 aa23.03■■□□□ 1.28
NUP43-205ENST00000463048 PAWRQ96IZ0 340 aaKnown RBP23.03■■□□□ 1.28
NUP43-205ENST00000463048 UPF3AQ9H1J1 476 aaKnown RBP23.03■■□□□ 1.28
NUP43-205ENST00000463048 MLXIPQ9HAP2 919 aa23.03■■□□□ 1.28
NUP43-205ENST00000463048 BRCA2P51587 3418 aa23.02■■□□□ 1.28
NUP43-205ENST00000463048 IGLV3-22A0A075B6J6 115 aa23.02■■□□□ 1.28
NUP43-205ENST00000463048 DDX39AO00148 427 aaKnown RBP23.02■■□□□ 1.28
NUP43-205ENST00000463048 MEIS1O00470 390 aa23.02■■□□□ 1.28
NUP43-205ENST00000463048 CCNT1O60563 726 aaKnown RBP23.02■■□□□ 1.28
NUP43-205ENST00000463048 USP11P51784 963 aa23.02■■□□□ 1.28
NUP43-205ENST00000463048 BECN1Q14457 450 aa23.02■■□□□ 1.28
NUP43-205ENST00000463048 KCNA10Q16322 511 aa23.02■■□□□ 1.28
NUP43-205ENST00000463048 TELO2Q9Y4R8 837 aa23.02■■□□□ 1.28
NUP43-205ENST00000463048 CTAGE5O15320 804 aa23.01■■□□□ 1.27
NUP43-205ENST00000463048 MYL3P08590 195 aa23.01■■□□□ 1.27
NUP43-205ENST00000463048 TGFB3P10600 412 aa23.01■■□□□ 1.27
NUP43-205ENST00000463048 MNX1P50219 401 aaPredicted RBP23.01■■□□□ 1.27
NUP43-205ENST00000463048 CELF3Q5SZQ8 465 aaKnown RBP23.01■■□□□ 1.27
NUP43-205ENST00000463048 GJA10Q969M2 543 aa23.01■■□□□ 1.27
NUP43-205ENST00000463048 CDHR1Q96JP9 859 aa23.01■■□□□ 1.27
NUP43-205ENST00000463048 SPATA33Q96N06 139 aa23.01■■□□□ 1.27
NUP43-205ENST00000463048 FOXP1Q9H334 677 aaPredicted RBP23.01■■□□□ 1.27
NUP43-205ENST00000463048 AGO4Q9HCK5 861 aaKnown RBP23.01■■□□□ 1.27
NUP43-205ENST00000463048 DNM1LO00429 736 aa23■■□□□ 1.27
NUP43-205ENST00000463048 WNT7AO00755 349 aa23■■□□□ 1.27
NUP43-205ENST00000463048 KCNA2P16389 499 aa23■■□□□ 1.27
NUP43-205ENST00000463048 CIITAP33076 1130 aa23■■□□□ 1.27
NUP43-205ENST00000463048 CHMP4BP1P59074 171 aa23■■□□□ 1.27
NUP43-205ENST00000463048 LAMC2Q13753 1193 aa23■■□□□ 1.27
NUP43-205ENST00000463048 NEDD9Q14511 834 aa23■■□□□ 1.27
NUP43-205ENST00000463048 MYSM1Q5VVJ2 828 aa23■■□□□ 1.27
NUP43-205ENST00000463048 FERMT3Q86UX7 667 aa23■■□□□ 1.27
NUP43-205ENST00000463048 NOSTRINQ8IVI9 506 aa23■■□□□ 1.27
NUP43-205ENST00000463048 KLHDC9Q8NEP7 349 aa23■■□□□ 1.27
NUP43-205ENST00000463048 ZNF577Q9BSK1 485 aa23■■□□□ 1.27
NUP43-205ENST00000463048 SENP6Q9GZR1 1112 aaPredicted RBP23■■□□□ 1.27
NUP43-205ENST00000463048 DDX25Q9UHL0 483 aaKnown RBP23■■□□□ 1.27
NUP43-205ENST00000463048 Q9Y3F1 56 aa23■■□□□ 1.27
NUP43-205ENST00000463048 SLC37A4O43826 429 aa22.99■■□□□ 1.27
NUP43-205ENST00000463048 ASGR1P07306 291 aa22.99■■□□□ 1.27
NUP43-205ENST00000463048 PDCP20941 246 aa22.99■■□□□ 1.27
NUP43-205ENST00000463048 SYT1P21579 422 aa22.99■■□□□ 1.27
NUP43-205ENST00000463048 CPT1AP50416 773 aa22.99■■□□□ 1.27
NUP43-205ENST00000463048 ITGB3BPQ13352 177 aaPredicted RBP22.99■■□□□ 1.27
NUP43-205ENST00000463048 NIPA1Q7RTP0 329 aa22.99■■□□□ 1.27
NUP43-205ENST00000463048 ANKLE1Q8NAG6 615 aa22.99■■□□□ 1.27
NUP43-205ENST00000463048 VTI1AQ96AJ9 217 aa22.99■■□□□ 1.27
NUP43-205ENST00000463048 LENG9Q96B70 501 aa22.99■■□□□ 1.27
NUP43-205ENST00000463048 NOP56O00567 594 aaKnown RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms