RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 RNF146Q9NTX7 359 aa9.44□□□□□ -0.9
GARNL3-212ENST00000463005 CHD9Q3L8U1 2897 aa9.43□□□□□ -0.9
GARNL3-212ENST00000463005 TET1Q8NFU7 2136 aa9.43□□□□□ -0.9
GARNL3-212ENST00000463005 SCN10AQ9Y5Y9 1956 aa9.43□□□□□ -0.9
GARNL3-212ENST00000463005 LRRC37A2A6NM11 1700 aa9.43□□□□□ -0.9
GARNL3-212ENST00000463005 TNKSO95271 1327 aa9.43□□□□□ -0.9
GARNL3-212ENST00000463005 TMEM232C9JQI7 657 aa9.43□□□□□ -0.9
GARNL3-212ENST00000463005 RFXAPO00287 272 aa9.43□□□□□ -0.9
GARNL3-212ENST00000463005 KPNA6O60684 536 aa9.43□□□□□ -0.9
GARNL3-212ENST00000463005 GNAT2P19087 354 aa9.43□□□□□ -0.9
GARNL3-212ENST00000463005 CPT1AP50416 773 aa9.43□□□□□ -0.9
GARNL3-212ENST00000463005 PSMC6P62333 389 aa9.43□□□□□ -0.9
GARNL3-212ENST00000463005 PTPN11Q06124 597 aaPredicted RBP9.43□□□□□ -0.9
GARNL3-212ENST00000463005 TTLL4Q14679 1199 aa9.43□□□□□ -0.9
GARNL3-212ENST00000463005 BRDTQ58F21 947 aaPredicted RBP9.43□□□□□ -0.9
GARNL3-212ENST00000463005 NEDD1Q8NHV4 660 aa9.43□□□□□ -0.9
GARNL3-212ENST00000463005 BAP1Q92560 729 aa9.43□□□□□ -0.9
GARNL3-212ENST00000463005 CEP95Q96GE4 821 aa9.43□□□□□ -0.9
GARNL3-212ENST00000463005 GMCL1Q96IK5 515 aa9.43□□□□□ -0.9
GARNL3-212ENST00000463005 RWDD1Q9H446 243 aaPredicted RBP9.43□□□□□ -0.9
GARNL3-212ENST00000463005 PDGFCQ9NRA1 345 aa9.43□□□□□ -0.9
GARNL3-212ENST00000463005 HOMER2Q9NSB8 354 aa9.43□□□□□ -0.9
GARNL3-212ENST00000463005 ZBTB40Q9NUA8 1239 aa9.43□□□□□ -0.9
GARNL3-212ENST00000463005 ADD3Q9UEY8 706 aaKnown RBP9.43□□□□□ -0.9
GARNL3-212ENST00000463005 ZNF536O15090 1300 aa9.42□□□□□ -0.9
GARNL3-212ENST00000463005 PATL2C9JE40 543 aaKnown RBP9.42□□□□□ -0.9
GARNL3-212ENST00000463005 PI4K2BG5E9Z4 385 aa9.42□□□□□ -0.9
GARNL3-212ENST00000463005 BAIAP3O94812 1187 aa9.42□□□□□ -0.9
GARNL3-212ENST00000463005 CHGBP05060 677 aa9.42□□□□□ -0.9
GARNL3-212ENST00000463005 SLC3A2P08195 630 aaKnown RBP9.42□□□□□ -0.9
GARNL3-212ENST00000463005 IQCF3P0C7M6 154 aa9.42□□□□□ -0.9
GARNL3-212ENST00000463005 TSPY3P0CV98 308 aa9.42□□□□□ -0.9
GARNL3-212ENST00000463005 TSPY8P0CW00 308 aa9.42□□□□□ -0.9
GARNL3-212ENST00000463005 ALAS1P13196 640 aa9.42□□□□□ -0.9
GARNL3-212ENST00000463005 SLC1A4P43007 532 aa9.42□□□□□ -0.9
GARNL3-212ENST00000463005 TAP1Q03518 808 aa9.42□□□□□ -0.9
GARNL3-212ENST00000463005 PDE4BQ07343 736 aa9.42□□□□□ -0.9
GARNL3-212ENST00000463005 BFSP2Q13515 415 aa9.42□□□□□ -0.9
GARNL3-212ENST00000463005 RCSD1Q6JBY9 416 aa9.42□□□□□ -0.9
GARNL3-212ENST00000463005 DEFB128Q7Z7B8 93 aa9.42□□□□□ -0.9
GARNL3-212ENST00000463005 HERC6Q8IVU3 1022 aa9.42□□□□□ -0.9
GARNL3-212ENST00000463005 STK11IPQ8N1F8 1099 aa9.42□□□□□ -0.9
GARNL3-212ENST00000463005 FAM174AQ8TBP5 190 aa9.42□□□□□ -0.9
GARNL3-212ENST00000463005 APPBP2Q92624 585 aa9.42□□□□□ -0.9
GARNL3-212ENST00000463005 FOXJ1Q92949 421 aa9.42□□□□□ -0.9
GARNL3-212ENST00000463005 MTG1Q9BT17 334 aaPredicted RBP9.42□□□□□ -0.9
GARNL3-212ENST00000463005 CERS4Q9HA82 394 aa9.42□□□□□ -0.9
GARNL3-212ENST00000463005 TRMT13Q9NUP7 481 aaKnown RBP9.42□□□□□ -0.9
GARNL3-212ENST00000463005 CYP39A1Q9NYL5 469 aa9.42□□□□□ -0.9
GARNL3-212ENST00000463005 PCDHB9Q9Y5E1 797 aa9.42□□□□□ -0.9
GARNL3-212ENST00000463005 RBM47A0AV96 593 aaKnown RBP9.41□□□□□ -0.9
GARNL3-212ENST00000463005 NKRFO15226 690 aaKnown RBP eCLIP9.41□□□□□ -0.9
GARNL3-212ENST00000463005 PARNO95453 639 aaKnown RBP9.41□□□□□ -0.9
GARNL3-212ENST00000463005 ZFYP08048 801 aaPredicted RBP9.41□□□□□ -0.9
GARNL3-212ENST00000463005 CYP2C9P11712 490 aa9.41□□□□□ -0.9
GARNL3-212ENST00000463005 TDO2P48775 406 aa9.41□□□□□ -0.9
GARNL3-212ENST00000463005 PURAQ00577 322 aaKnown RBP9.41□□□□□ -0.9
GARNL3-212ENST00000463005 IKQ13123 557 aaPredicted RBP9.41□□□□□ -0.9
GARNL3-212ENST00000463005 LRRFIP1Q32MZ4 808 aaKnown RBP9.41□□□□□ -0.9
GARNL3-212ENST00000463005 NFRKBQ6P4R8 1299 aa9.41□□□□□ -0.9
GARNL3-212ENST00000463005 EEPD1Q7L9B9 569 aa9.41□□□□□ -0.9
GARNL3-212ENST00000463005 LRRC47Q8N1G4 583 aaKnown RBP9.41□□□□□ -0.9
GARNL3-212ENST00000463005 KBTBD3Q8NAB2 608 aa9.41□□□□□ -0.9
GARNL3-212ENST00000463005 ADAM32Q8TC27 787 aa9.41□□□□□ -0.9
GARNL3-212ENST00000463005 ARNTL2Q8WYA1 636 aa9.41□□□□□ -0.9
GARNL3-212ENST00000463005 MPHOSPH6Q99547 160 aaKnown RBP9.41□□□□□ -0.9
GARNL3-212ENST00000463005 WDR11Q9BZH6 1224 aa9.41□□□□□ -0.9
GARNL3-212ENST00000463005 FTOQ9C0B1 505 aaKnown RBP eCLIP9.41□□□□□ -0.9
GARNL3-212ENST00000463005 BCL11AQ9H165 835 aa9.41□□□□□ -0.9
GARNL3-212ENST00000463005 MAFBQ9Y5Q3 323 aaPredicted RBP9.41□□□□□ -0.9
GARNL3-212ENST00000463005 LCTP09848 1927 aa9.41□□□□□ -0.9
GARNL3-212ENST00000463005 TANC1Q9C0D5 1861 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 CHD7Q9P2D1 2997 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 PLIN4Q96Q06 1357 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 RAD50Q92878 1312 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 PRR33A8MZF0 331 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 RNF113AO15541 343 aaKnown RBP9.4□□□□□ -0.9
GARNL3-212ENST00000463005 PRDM1O75626 825 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 APPP05067 770 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 MYL3P08590 195 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 PDIA4P13667 645 aaKnown RBP9.4□□□□□ -0.9
GARNL3-212ENST00000463005 MCCP23508 829 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 SOX11P35716 441 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 KCNJ6P48051 423 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 TFAP4Q01664 338 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 GRB10Q13322 594 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 NBPF20Q3BBV1 942 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 C4orf48Q5BLP8 95 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 PLA2G2CQ5R387 149 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 B4GALNT3Q6L9W6 998 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 PDXDC2PQ6P474 469 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 FBXO16Q8IX29 292 aaPredicted RBP9.4□□□□□ -0.9
GARNL3-212ENST00000463005 SIRT2Q8IXJ6 389 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 IFNL3Q8IZI9 196 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 DEPDC4Q8N2C3 294 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 OSBP2Q969R2 916 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 RNF166Q96A37 237 aaPredicted RBP9.4□□□□□ -0.9
GARNL3-212ENST00000463005 ARHGAP9Q9BRR9 750 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 NACAP1Q9BZK3 213 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 ECHDC1Q9NTX5 307 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms