RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 NEK8Q86SG6 692 aa13.42□□□□□ -0.26
CPNE1-221ENST00000462352 NOSTRINQ8IVI9 506 aa13.42□□□□□ -0.26
CPNE1-221ENST00000462352 COPS5Q92905 334 aa13.42□□□□□ -0.26
CPNE1-221ENST00000462352 XPNPEP3Q9NQH7 507 aa13.42□□□□□ -0.26
CPNE1-221ENST00000462352 DDX41Q9UJV9 622 aaKnown RBP13.42□□□□□ -0.26
CPNE1-221ENST00000462352 MYH7BA7E2Y1 1941 aa13.42□□□□□ -0.26
CPNE1-221ENST00000462352 VPS37CA5D8V6 355 aaPredicted RBP13.41□□□□□ -0.26
CPNE1-221ENST00000462352 CCDC85CA6NKD9 419 aa13.41□□□□□ -0.26
CPNE1-221ENST00000462352 NKRFO15226 690 aaKnown RBP eCLIP13.41□□□□□ -0.26
CPNE1-221ENST00000462352 MAFGO15525 162 aa13.41□□□□□ -0.26
CPNE1-221ENST00000462352 TDP2O95551 362 aa13.41□□□□□ -0.26
CPNE1-221ENST00000462352 ARP10275 920 aa13.41□□□□□ -0.26
CPNE1-221ENST00000462352 TGFB3P10600 412 aa13.41□□□□□ -0.26
CPNE1-221ENST00000462352 UBA1P22314 1058 aaKnown RBP13.41□□□□□ -0.26
CPNE1-221ENST00000462352 SP2Q02086 613 aa13.41□□□□□ -0.26
CPNE1-221ENST00000462352 LETM2Q2VYF4 491 aa13.41□□□□□ -0.26
CPNE1-221ENST00000462352 MCTP1Q6DN14 999 aa13.41□□□□□ -0.26
CPNE1-221ENST00000462352 NIPA1Q7RTP0 329 aa13.41□□□□□ -0.26
CPNE1-221ENST00000462352 TLK2Q86UE8 772 aa13.41□□□□□ -0.26
CPNE1-221ENST00000462352 PLA2G4DQ86XP0 818 aa13.41□□□□□ -0.26
CPNE1-221ENST00000462352 CDHR1Q96JP9 859 aa13.41□□□□□ -0.26
CPNE1-221ENST00000462352 CRISPLD2Q9H0B8 497 aa13.41□□□□□ -0.26
CPNE1-221ENST00000462352 KCNH7Q9NS40 1196 aa13.41□□□□□ -0.26
CPNE1-221ENST00000462352 OGDHLQ9ULD0 1010 aa13.41□□□□□ -0.26
CPNE1-221ENST00000462352 SYNRGQ9UMZ2 1314 aa13.4□□□□□ -0.26
CPNE1-221ENST00000462352 CYP3A7-CYP3A51PA0A087WV96 503 aa13.4□□□□□ -0.26
CPNE1-221ENST00000462352 POTEFA5A3E0 1075 aa13.4□□□□□ -0.26
CPNE1-221ENST00000462352 DYNC1LI2O43237 492 aaPredicted RBP13.4□□□□□ -0.26
CPNE1-221ENST00000462352 STX6O43752 255 aa13.4□□□□□ -0.26
CPNE1-221ENST00000462352 CCNT1O60563 726 aaKnown RBP13.4□□□□□ -0.26
CPNE1-221ENST00000462352 ATP9AO75110 1047 aa13.4□□□□□ -0.26
CPNE1-221ENST00000462352 ADAMTS4O75173 837 aa13.4□□□□□ -0.26
CPNE1-221ENST00000462352 PGK1P00558 417 aa13.4□□□□□ -0.26
CPNE1-221ENST00000462352 GH1P01241 217 aa13.4□□□□□ -0.26
CPNE1-221ENST00000462352 TFRCP02786 760 aaKnown RBP13.4□□□□□ -0.26
CPNE1-221ENST00000462352 CYP3A7P24462 503 aa13.4□□□□□ -0.26
CPNE1-221ENST00000462352 GJA9P57773 515 aa13.4□□□□□ -0.26
CPNE1-221ENST00000462352 SETQ01105 290 aaPredicted RBP13.4□□□□□ -0.26
CPNE1-221ENST00000462352 PRR16Q569H4 304 aa13.4□□□□□ -0.26
CPNE1-221ENST00000462352 MOXD1Q6UVY6 613 aa13.4□□□□□ -0.26
CPNE1-221ENST00000462352 LENG9Q96B70 501 aa13.4□□□□□ -0.26
CPNE1-221ENST00000462352 UPF3AQ9H1J1 476 aaKnown RBP13.4□□□□□ -0.26
CPNE1-221ENST00000462352 PKD2L1Q9P0L9 805 aa13.4□□□□□ -0.26
CPNE1-221ENST00000462352 Q9Y3F1 56 aa13.4□□□□□ -0.26
CPNE1-221ENST00000462352 BRCA2P51587 3418 aa13.39□□□□□ -0.27
CPNE1-221ENST00000462352 FRMPD3Q5JV73 1810 aa13.39□□□□□ -0.27
CPNE1-221ENST00000462352 KIAA0100Q14667 2235 aaKnown RBP13.39□□□□□ -0.27
CPNE1-221ENST00000462352 SORBS3O60504 671 aa13.39□□□□□ -0.27
CPNE1-221ENST00000462352 GGPS1O95749 300 aa13.39□□□□□ -0.27
CPNE1-221ENST00000462352 C6orf222P0C671 652 aaPredicted RBP13.39□□□□□ -0.27
CPNE1-221ENST00000462352 KCNA2P16389 499 aa13.39□□□□□ -0.27
CPNE1-221ENST00000462352 ANP32AP39687 249 aaKnown RBP13.39□□□□□ -0.27
CPNE1-221ENST00000462352 SOX10P56693 466 aa13.39□□□□□ -0.27
CPNE1-221ENST00000462352 IRX5P78411 483 aaPredicted RBP13.39□□□□□ -0.27
CPNE1-221ENST00000462352 ARHGAP1Q07960 439 aa13.39□□□□□ -0.27
CPNE1-221ENST00000462352 NEDD9Q14511 834 aa13.39□□□□□ -0.27
CPNE1-221ENST00000462352 Q4G0T1 1027 aa13.39□□□□□ -0.27
CPNE1-221ENST00000462352 CELF3Q5SZQ8 465 aaKnown RBP13.39□□□□□ -0.27
CPNE1-221ENST00000462352 PPP4R3AQ6IN85 833 aa13.39□□□□□ -0.27
CPNE1-221ENST00000462352 DHX37Q8IY37 1157 aaKnown RBP13.39□□□□□ -0.27
CPNE1-221ENST00000462352 OR6J1Q8NGC5 347 aa13.39□□□□□ -0.27
CPNE1-221ENST00000462352 MBOAT7Q96N66 472 aa13.39□□□□□ -0.27
CPNE1-221ENST00000462352 NAP1L4Q99733 375 aaKnown RBP13.39□□□□□ -0.27
CPNE1-221ENST00000462352 SENP7Q9BQF6 1050 aa13.39□□□□□ -0.27
CPNE1-221ENST00000462352 AP5M1Q9H0R1 490 aa13.39□□□□□ -0.27
CPNE1-221ENST00000462352 BCAS3Q9H6U6 928 aa13.39□□□□□ -0.27
CPNE1-221ENST00000462352 SPC25Q9HBM1 224 aa13.39□□□□□ -0.27
CPNE1-221ENST00000462352 AGO4Q9HCK5 861 aaKnown RBP13.39□□□□□ -0.27
CPNE1-221ENST00000462352 TSHZ2Q9NRE2 1034 aa13.39□□□□□ -0.27
CPNE1-221ENST00000462352 MTMR6Q9Y217 621 aa13.39□□□□□ -0.27
CPNE1-221ENST00000462352 MYADML2A6NDP7 307 aa13.38□□□□□ -0.27
CPNE1-221ENST00000462352 WNT7AO00755 349 aa13.38□□□□□ -0.27
CPNE1-221ENST00000462352 CTAGE5O15320 804 aa13.38□□□□□ -0.27
CPNE1-221ENST00000462352 SLC37A4O43826 429 aa13.38□□□□□ -0.27
CPNE1-221ENST00000462352 MYCNP04198 464 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-221ENST00000462352 GCFC2P16383 781 aaKnown RBP13.38□□□□□ -0.27
CPNE1-221ENST00000462352 CAPN2P17655 700 aa13.38□□□□□ -0.27
CPNE1-221ENST00000462352 EN2P19622 333 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-221ENST00000462352 ATP2B1P20020 1258 aa13.38□□□□□ -0.27
CPNE1-221ENST00000462352 NKX3-2P78367 333 aa13.38□□□□□ -0.27
CPNE1-221ENST00000462352 BEX3Q00994 111 aa13.38□□□□□ -0.27
CPNE1-221ENST00000462352 ITGB3BPQ13352 177 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-221ENST00000462352 LRRC41Q15345 812 aa13.38□□□□□ -0.27
CPNE1-221ENST00000462352 MYSM1Q5VVJ2 828 aa13.38□□□□□ -0.27
CPNE1-221ENST00000462352 METTL7BQ6UX53 244 aa13.38□□□□□ -0.27
CPNE1-221ENST00000462352 CYFIP1Q7L576 1253 aa13.38□□□□□ -0.27
CPNE1-221ENST00000462352 RNF180Q86T96 592 aa13.38□□□□□ -0.27
CPNE1-221ENST00000462352 FERMT3Q86UX7 667 aa13.38□□□□□ -0.27
CPNE1-221ENST00000462352 ARRDC4Q8NCT1 418 aa13.38□□□□□ -0.27
CPNE1-221ENST00000462352 GIMAP8Q8ND71 665 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-221ENST00000462352 KLHDC9Q8NEP7 349 aa13.38□□□□□ -0.27
CPNE1-221ENST00000462352 ZNF577Q9BSK1 485 aa13.38□□□□□ -0.27
CPNE1-221ENST00000462352 MLXIPQ9HAP2 919 aa13.38□□□□□ -0.27
CPNE1-221ENST00000462352 DDX25Q9UHL0 483 aaKnown RBP13.38□□□□□ -0.27
CPNE1-221ENST00000462352 NOL7Q9UMY1 257 aaKnown RBP13.38□□□□□ -0.27
CPNE1-221ENST00000462352 IPO5O00410 1097 aaKnown RBP13.37□□□□□ -0.27
CPNE1-221ENST00000462352 MSH4O15457 936 aa13.37□□□□□ -0.27
CPNE1-221ENST00000462352 FARP2O94887 1054 aaPredicted RBP13.37□□□□□ -0.27
CPNE1-221ENST00000462352 PDIA4P13667 645 aaKnown RBP13.37□□□□□ -0.27
CPNE1-221ENST00000462352 CST5P28325 142 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms