RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 DDX56Q9NY93 547 aaKnown RBP4.2□□□□□ -1.74
HDAC6-212ENST00000461608 ZNF281Q9Y2X9 895 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 TRAF6Q9Y4K3 522 aa4.2□□□□□ -1.74
HDAC6-212ENST00000461608 BLACEA4D250 179 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 ETV2O00321 342 aaPredicted RBP4.19□□□□□ -1.74
HDAC6-212ENST00000461608 ZEB2O60315 1214 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 GAS7O60861 476 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 FKTNO75072 461 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 RAB11FIP3O75154 756 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 RASGRP1O95267 797 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 ESR1P03372 595 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 S100BP04271 92 aaPredicted RBP4.19□□□□□ -1.74
HDAC6-212ENST00000461608 CELA3BP08861 270 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 PDGFRBP09619 1106 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 RPL10P27635 214 aaKnown RBP4.19□□□□□ -1.74
HDAC6-212ENST00000461608 ERVFC1P60507 584 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 ST5P78524 1137 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 LSAMPQ13449 338 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 LAPTM5Q13571 262 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 C21orf62-AS1Q17RA5 79 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 RNF219Q5W0B1 726 aaPredicted RBP4.19□□□□□ -1.74
HDAC6-212ENST00000461608 DENND5AQ6IQ26 1287 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 CCDC103Q8IW40 242 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 ABHD4Q8TB40 342 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 USP7Q93009 1102 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 SCLYQ96I15 445 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 WNK4Q96J92 1243 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 MAP6Q96JE9 813 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 C20orf173Q96LM9 149 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 IFT22Q9H7X7 185 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.19□□□□□ -1.74
HDAC6-212ENST00000461608 NUB1Q9Y5A7 615 aa4.19□□□□□ -1.74
HDAC6-212ENST00000461608 TIMM13Q9Y5L4 95 aaPredicted RBP4.19□□□□□ -1.74
HDAC6-212ENST00000461608 KPNA6O60684 536 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 SOD2P04179 222 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 ADRB1P08588 477 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 SCNN1BP51168 640 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 FAPQ12884 760 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 ZNF460Q14592 562 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 ARHGAP44Q17R89 818 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 ZNF385BQ569K4 471 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 RALGPS1Q5JS13 557 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 PIK3R6Q5UE93 754 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 CDCA2Q69YH5 1023 aaPredicted RBP4.18□□□□□ -1.74
HDAC6-212ENST00000461608 TMEM132EQ6IEE7 984 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 PKN3Q6P5Z2 889 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 KCNT2Q6UVM3 1135 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 FERMT3Q86UX7 667 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 SPATS2Q86XZ4 545 aaKnown RBP4.18□□□□□ -1.74
HDAC6-212ENST00000461608 JAMLQ86YT9 394 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 RCBTB1Q8NDN9 531 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 NLGN2Q8NFZ4 835 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 ATL2Q8NHH9 583 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 FBXW5Q969U6 566 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 ALPK1Q96QP1 1244 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.18□□□□□ -1.74
HDAC6-212ENST00000461608 SAMD15Q9P1V8 674 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 TMEM59LQ9UK28 342 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 ZKSCAN5Q9Y2L8 839 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 COA3Q9Y2R0 106 aaPredicted RBP4.18□□□□□ -1.74
HDAC6-212ENST00000461608 ASXL2Q76L83 1435 aa4.18□□□□□ -1.74
HDAC6-212ENST00000461608 ADAMTS20P59510 1910 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 C7orf72A4D263 438 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 FITM1A5D6W6 292 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 FAM83GA6ND36 823 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 WTIPA6NIX2 430 aaPredicted RBP4.17□□□□□ -1.74
HDAC6-212ENST00000461608 CBX4O00257 560 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 MAFKO60675 156 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 SPIRE1Q08AE8 756 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 CHRNA2Q15822 529 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 CRY1Q16526 586 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 PLEKHG6Q3KR16 790 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 MROH9Q5TGP6 573 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 CYP4F22Q6NT55 531 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 C16orf59Q7L2K0 433 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 SLCO6A1Q86UG4 719 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 CABP7Q86V35 215 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 RIOX2Q8IUF8 465 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 SPPL2CQ8IUH8 684 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 OXR1Q8N573 874 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 CHST14Q8NCH0 376 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 LEO1Q8WVC0 666 aaPredicted RBP4.17□□□□□ -1.74
HDAC6-212ENST00000461608 TMEM169Q96HH4 297 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 EPB41L1Q9H4G0 881 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 TMEFF2Q9UIK5 374 aaPredicted RBP4.17□□□□□ -1.74
HDAC6-212ENST00000461608 CNOT6Q9ULM6 557 aaKnown RBP4.17□□□□□ -1.74
HDAC6-212ENST00000461608 PCDHA9Q9Y5H5 950 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 PCDHA8Q9Y5H6 950 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 PCDHA2Q9Y5H9 948 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 TAF6LQ9Y6J9 622 aa4.17□□□□□ -1.74
HDAC6-212ENST00000461608 CCDC66A2RUB6 948 aa4.16□□□□□ -1.74
HDAC6-212ENST00000461608 FADS2P1A8MWK0 482 aa4.16□□□□□ -1.74
HDAC6-212ENST00000461608 GPR39O43194 453 aa4.16□□□□□ -1.74
HDAC6-212ENST00000461608 ULK1O75385 1050 aa4.16□□□□□ -1.74
HDAC6-212ENST00000461608 GLRX3O76003 335 aaKnown RBP4.16□□□□□ -1.74
HDAC6-212ENST00000461608 EYA4O95677 639 aa4.16□□□□□ -1.74
HDAC6-212ENST00000461608 F2P00734 622 aa4.16□□□□□ -1.74
HDAC6-212ENST00000461608 BPIP17213 487 aa4.16□□□□□ -1.74
HDAC6-212ENST00000461608 POU3F3P20264 500 aaPredicted RBP4.16□□□□□ -1.74
HDAC6-212ENST00000461608 TRHRP34981 398 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms