RNA–Protein interactions for RNA: ENST00000461477.5

NECTIN3-202, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-202ENST00000461477 RCSD1Q6JBY9 416 aa11□□□□□ -0.65
NECTIN3-202ENST00000461477 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11□□□□□ -0.65
NECTIN3-202ENST00000461477 NEK9Q8TD19 979 aa11□□□□□ -0.65
NECTIN3-202ENST00000461477 CHURC1Q8WUH1 139 aa11□□□□□ -0.65
NECTIN3-202ENST00000461477 APPBP2Q92624 585 aa11□□□□□ -0.65
NECTIN3-202ENST00000461477 SNX27Q96L92 541 aa11□□□□□ -0.65
NECTIN3-202ENST00000461477 OSBPL7Q9BZF2 842 aa11□□□□□ -0.65
NECTIN3-202ENST00000461477 RANBP17Q9H2T7 1088 aaKnown RBP11□□□□□ -0.65
NECTIN3-202ENST00000461477 CHMP4BQ9H444 224 aaKnown RBP11□□□□□ -0.65
NECTIN3-202ENST00000461477 KIAA1468Q9P260 1216 aa11□□□□□ -0.65
NECTIN3-202ENST00000461477 MTMR7Q9Y216 660 aa11□□□□□ -0.65
NECTIN3-202ENST00000461477 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11□□□□□ -0.65
NECTIN3-202ENST00000461477 KIF28PB7ZC32 967 aa10.99□□□□□ -0.65
NECTIN3-202ENST00000461477 RNF113AO15541 343 aaKnown RBP10.99□□□□□ -0.65
NECTIN3-202ENST00000461477 RAB11FIP3O75154 756 aa10.99□□□□□ -0.65
NECTIN3-202ENST00000461477 SSTR3P32745 418 aaPredicted RBP10.99□□□□□ -0.65
NECTIN3-202ENST00000461477 NOVP48745 357 aa10.99□□□□□ -0.65
NECTIN3-202ENST00000461477 CTDSPL2Q05D32 466 aa10.99□□□□□ -0.65
NECTIN3-202ENST00000461477 PTGISQ16647 500 aa10.99□□□□□ -0.65
NECTIN3-202ENST00000461477 ZSCAN25Q6NSZ9 544 aa10.99□□□□□ -0.65
NECTIN3-202ENST00000461477 THSD4Q6ZMP0 1018 aa10.99□□□□□ -0.65
NECTIN3-202ENST00000461477 HFE2Q6ZVN8 426 aa10.99□□□□□ -0.65
NECTIN3-202ENST00000461477 KBTBD3Q8NAB2 608 aa10.99□□□□□ -0.65
NECTIN3-202ENST00000461477 RETREG2Q8NC44 543 aa10.99□□□□□ -0.65
NECTIN3-202ENST00000461477 TGS1Q96RS0 853 aaKnown RBP10.99□□□□□ -0.65
NECTIN3-202ENST00000461477 MYH7BA7E2Y1 1941 aa10.99□□□□□ -0.65
NECTIN3-202ENST00000461477 TRIM6-TRIM34B2RNG4 842 aa10.98□□□□□ -0.65
NECTIN3-202ENST00000461477 PATL2C9JE40 543 aaKnown RBP10.98□□□□□ -0.65
NECTIN3-202ENST00000461477 CKBP12277 381 aa10.98□□□□□ -0.65
NECTIN3-202ENST00000461477 CALML3P27482 149 aa10.98□□□□□ -0.65
NECTIN3-202ENST00000461477 KCNJ6P48051 423 aa10.98□□□□□ -0.65
NECTIN3-202ENST00000461477 ZNF200P98182 395 aaPredicted RBP10.98□□□□□ -0.65
NECTIN3-202ENST00000461477 ZP2Q05996 745 aa10.98□□□□□ -0.65
NECTIN3-202ENST00000461477 PPARAQ07869 468 aa10.98□□□□□ -0.65
NECTIN3-202ENST00000461477 BFSP2Q13515 415 aa10.98□□□□□ -0.65
NECTIN3-202ENST00000461477 TSR1Q2NL82 804 aaKnown RBP10.98□□□□□ -0.65
NECTIN3-202ENST00000461477 CCDC62Q6P9F0 684 aa10.98□□□□□ -0.65
NECTIN3-202ENST00000461477 CNKSR3Q6P9H4 555 aa10.98□□□□□ -0.65
NECTIN3-202ENST00000461477 LRRC8DQ7L1W4 858 aa10.98□□□□□ -0.65
NECTIN3-202ENST00000461477 LAPTM4BQ86VI4 370 aa10.98□□□□□ -0.65
NECTIN3-202ENST00000461477 AFAP1L1Q8TED9 768 aa10.98□□□□□ -0.65
NECTIN3-202ENST00000461477 AFG1LQ8WV93 481 aa10.98□□□□□ -0.65
NECTIN3-202ENST00000461477 RAD9AQ99638 391 aa10.98□□□□□ -0.65
NECTIN3-202ENST00000461477 PLA2G2EQ9NZK7 142 aa10.98□□□□□ -0.65
NECTIN3-202ENST00000461477 PTPDC1A2A3K4 754 aa10.97□□□□□ -0.65
NECTIN3-202ENST00000461477 LGR5O75473 907 aa10.97□□□□□ -0.65
NECTIN3-202ENST00000461477 APPP05067 770 aa10.97□□□□□ -0.65
NECTIN3-202ENST00000461477 TXNP10599 105 aaKnown RBP10.97□□□□□ -0.65
NECTIN3-202ENST00000461477 SELPP16109 830 aa10.97□□□□□ -0.65
NECTIN3-202ENST00000461477 LTBRP36941 435 aa10.97□□□□□ -0.65
NECTIN3-202ENST00000461477 PTPN11Q06124 597 aaPredicted RBP10.97□□□□□ -0.65
NECTIN3-202ENST00000461477 ARHGAP1Q07960 439 aa10.97□□□□□ -0.65
NECTIN3-202ENST00000461477 RBL2Q08999 1139 aa10.97□□□□□ -0.65
NECTIN3-202ENST00000461477 PPP2R5BQ15173 497 aa10.97□□□□□ -0.65
NECTIN3-202ENST00000461477 LY6KQ17RY6 165 aa10.97□□□□□ -0.65
NECTIN3-202ENST00000461477 BTNL9Q6UXG8 535 aa10.97□□□□□ -0.65
NECTIN3-202ENST00000461477 ANKK1Q8NFD2 765 aa10.97□□□□□ -0.65
NECTIN3-202ENST00000461477 TBC1D5Q92609 795 aa10.97□□□□□ -0.65
NECTIN3-202ENST00000461477 STX8Q9UNK0 236 aa10.97□□□□□ -0.65
NECTIN3-202ENST00000461477 FRMPD2Q68DX3 1309 aaPredicted RBP10.97□□□□□ -0.65
NECTIN3-202ENST00000461477 COL4A6Q14031 1691 aa10.97□□□□□ -0.65
NECTIN3-202ENST00000461477 KMT2EQ8IZD2 1858 aa10.97□□□□□ -0.65
NECTIN3-202ENST00000461477 ZDBF2Q9HCK1 2354 aa10.96□□□□□ -0.65
NECTIN3-202ENST00000461477 DCXO43602 365 aa10.96□□□□□ -0.65
NECTIN3-202ENST00000461477 MMP3P08254 477 aa10.96□□□□□ -0.65
NECTIN3-202ENST00000461477 RPS6P62753 249 aaKnown RBP10.96□□□□□ -0.65
NECTIN3-202ENST00000461477 PLCB2Q00722 1185 aa10.96□□□□□ -0.65
NECTIN3-202ENST00000461477 COL19A1Q14993 1142 aa10.96□□□□□ -0.65
NECTIN3-202ENST00000461477 LRRFIP1Q32MZ4 808 aaKnown RBP10.96□□□□□ -0.65
NECTIN3-202ENST00000461477 TCEAL5Q5H9L2 206 aa10.96□□□□□ -0.65
NECTIN3-202ENST00000461477 ZNF618Q5T7W0 954 aa10.96□□□□□ -0.65
NECTIN3-202ENST00000461477 SYDE2Q5VT97 1194 aa10.96□□□□□ -0.65
NECTIN3-202ENST00000461477 SESTD1Q86VW0 696 aa10.96□□□□□ -0.65
NECTIN3-202ENST00000461477 PRSS33Q8NF86 280 aa10.96□□□□□ -0.65
NECTIN3-202ENST00000461477 CAGE1Q8TC20 777 aa10.96□□□□□ -0.65
NECTIN3-202ENST00000461477 SCFD2Q8WU76 684 aa10.96□□□□□ -0.65
NECTIN3-202ENST00000461477 CPVLQ9H3G5 476 aa10.96□□□□□ -0.65
NECTIN3-202ENST00000461477 ALG13Q9NP73 1137 aaKnown RBP10.96□□□□□ -0.65
NECTIN3-202ENST00000461477 GPCPD1Q9NPB8 672 aa10.96□□□□□ -0.65
NECTIN3-202ENST00000461477 ECHDC1Q9NTX5 307 aa10.96□□□□□ -0.65
NECTIN3-202ENST00000461477 COL20A1Q9P218 1284 aa10.96□□□□□ -0.65
NECTIN3-202ENST00000461477 HDAC6Q9UBN7 1215 aa10.96□□□□□ -0.65
NECTIN3-202ENST00000461477 ADD3Q9UEY8 706 aaKnown RBP10.96□□□□□ -0.65
NECTIN3-202ENST00000461477 DDX19BQ9UMR2 479 aa10.96□□□□□ -0.65
NECTIN3-202ENST00000461477 NOD1Q9Y239 953 aa10.96□□□□□ -0.65
NECTIN3-202ENST00000461477 RALGAPA2Q2PPJ7 1873 aa10.95□□□□□ -0.66
NECTIN3-202ENST00000461477 CACNA1HO95180 2353 aa10.95□□□□□ -0.66
NECTIN3-202ENST00000461477 ALADP13716 330 aa10.95□□□□□ -0.66
NECTIN3-202ENST00000461477 IRS1P35568 1242 aa10.95□□□□□ -0.66
NECTIN3-202ENST00000461477 HTRA4P83105 476 aaPredicted RBP10.95□□□□□ -0.66
NECTIN3-202ENST00000461477 DLX2Q07687 328 aaPredicted RBP10.95□□□□□ -0.66
NECTIN3-202ENST00000461477 PDE4DQ08499 809 aa10.95□□□□□ -0.66
NECTIN3-202ENST00000461477 CCDC96Q2M329 555 aa10.95□□□□□ -0.66
NECTIN3-202ENST00000461477 VPS53Q5VIR6 699 aa10.95□□□□□ -0.66
NECTIN3-202ENST00000461477 RNF207Q6ZRF8 634 aa10.95□□□□□ -0.66
NECTIN3-202ENST00000461477 LRRCC1Q9C099 1032 aa10.95□□□□□ -0.66
NECTIN3-202ENST00000461477 GTF2IRD1Q9UHL9 959 aa10.95□□□□□ -0.66
NECTIN3-202ENST00000461477 ZNF292O60281 2723 aa10.95□□□□□ -0.66
NECTIN3-202ENST00000461477 LOC102724159A0A0B4J2E5 919 aa10.94□□□□□ -0.66
NECTIN3-202ENST00000461477 ABHD14A-ACY1A0A1B0GW23 586 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms