RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 ARHGEF15O94989 841 aa17.06■□□□□ 0.32
SMPD4-216ENST00000461187 CKBP12277 381 aa17.06■□□□□ 0.32
SMPD4-216ENST00000461187 TROAPQ12815 778 aa17.06■□□□□ 0.32
SMPD4-216ENST00000461187 MFSD10Q14728 455 aa17.06■□□□□ 0.32
SMPD4-216ENST00000461187 KIAA0753Q2KHM9 967 aa17.06■□□□□ 0.32
SMPD4-216ENST00000461187 MYSM1Q5VVJ2 828 aa17.06■□□□□ 0.32
SMPD4-216ENST00000461187 KCNV1Q6PIU1 500 aa17.06■□□□□ 0.32
SMPD4-216ENST00000461187 LRRC8DQ7L1W4 858 aa17.06■□□□□ 0.32
SMPD4-216ENST00000461187 C7orf31Q8N865 590 aa17.06■□□□□ 0.32
SMPD4-216ENST00000461187 EPOPA6NHQ4 379 aa17.05■□□□□ 0.32
SMPD4-216ENST00000461187 E7EWF7 191 aa17.05■□□□□ 0.32
SMPD4-216ENST00000461187 NBNO60934 754 aa17.05■□□□□ 0.32
SMPD4-216ENST00000461187 PPFIA4O75335 1185 aa17.05■□□□□ 0.32
SMPD4-216ENST00000461187 CXCL10P02778 98 aa17.05■□□□□ 0.32
SMPD4-216ENST00000461187 POU3F3P20264 500 aaPredicted RBP17.05■□□□□ 0.32
SMPD4-216ENST00000461187 WDR5P61964 334 aaKnown RBP17.05■□□□□ 0.32
SMPD4-216ENST00000461187 MRPS5P82675 430 aaKnown RBP17.05■□□□□ 0.32
SMPD4-216ENST00000461187 SP2Q02086 613 aa17.05■□□□□ 0.32
SMPD4-216ENST00000461187 TAP1Q03518 808 aa17.05■□□□□ 0.32
SMPD4-216ENST00000461187 WTAPQ15007 396 aa17.05■□□□□ 0.32
SMPD4-216ENST00000461187 HSDL1Q3SXM5 330 aa17.05■□□□□ 0.32
SMPD4-216ENST00000461187 CELF3Q5SZQ8 465 aaKnown RBP17.05■□□□□ 0.32
SMPD4-216ENST00000461187 CERS4Q9HA82 394 aa17.05■□□□□ 0.32
SMPD4-216ENST00000461187 PNMA6FA0A0J9YX94 578 aa17.04■□□□□ 0.32
SMPD4-216ENST00000461187 ERICH2A1L162 156 aa17.04■□□□□ 0.32
SMPD4-216ENST00000461187 KIF28PB7ZC32 967 aa17.04■□□□□ 0.32
SMPD4-216ENST00000461187 GCOM1H8Y6P7 765 aaPredicted RBP17.04■□□□□ 0.32
SMPD4-216ENST00000461187 TNFRSF10AO00220 468 aa17.04■□□□□ 0.32
SMPD4-216ENST00000461187 SORBS3O60504 671 aa17.04■□□□□ 0.32
SMPD4-216ENST00000461187 PARNO95453 639 aaKnown RBP17.04■□□□□ 0.32
SMPD4-216ENST00000461187 GGPS1O95749 300 aa17.04■□□□□ 0.32
SMPD4-216ENST00000461187 POLR2MP0CAP2 368 aa17.04■□□□□ 0.32
SMPD4-216ENST00000461187 CCND2P30279 289 aa17.04■□□□□ 0.32
SMPD4-216ENST00000461187 KCNJ6P48051 423 aa17.04■□□□□ 0.32
SMPD4-216ENST00000461187 TRAF1Q13077 416 aa17.04■□□□□ 0.32
SMPD4-216ENST00000461187 PTK7Q13308 1070 aa17.04■□□□□ 0.32
SMPD4-216ENST00000461187 HIC1Q14526 733 aa17.04■□□□□ 0.32
SMPD4-216ENST00000461187 TCTN1Q2MV58 587 aa17.04■□□□□ 0.32
SMPD4-216ENST00000461187 TRIM71Q2Q1W2 868 aaKnown RBP17.04■□□□□ 0.32
SMPD4-216ENST00000461187 CNKSR3Q6P9H4 555 aa17.04■□□□□ 0.32
SMPD4-216ENST00000461187 FCHSD1Q86WN1 690 aa17.04■□□□□ 0.32
SMPD4-216ENST00000461187 MICALL1Q8N3F8 863 aa17.04■□□□□ 0.32
SMPD4-216ENST00000461187 NCOA7Q8NI08 942 aa17.04■□□□□ 0.32
SMPD4-216ENST00000461187 GPKOWQ92917 476 aaPredicted RBP eCLIP17.04■□□□□ 0.32
SMPD4-216ENST00000461187 WNT8BQ93098 351 aa17.04■□□□□ 0.32
SMPD4-216ENST00000461187 ZFP91Q96JP5 570 aaPredicted RBP17.04■□□□□ 0.32
SMPD4-216ENST00000461187 SPATA33Q96N06 139 aa17.04■□□□□ 0.32
SMPD4-216ENST00000461187 MTCH2Q9Y6C9 303 aa17.04■□□□□ 0.32
SMPD4-216ENST00000461187 SGSM2O43147 1006 aa17.03■□□□□ 0.32
SMPD4-216ENST00000461187 TGFB3P10600 412 aa17.03■□□□□ 0.32
SMPD4-216ENST00000461187 UBA1P22314 1058 aaKnown RBP17.03■□□□□ 0.32
SMPD4-216ENST00000461187 ANTXR2P58335 489 aa17.03■□□□□ 0.32
SMPD4-216ENST00000461187 DEFB103AP81534 67 aa17.03■□□□□ 0.32
SMPD4-216ENST00000461187 ZNF200P98182 395 aaPredicted RBP17.03■□□□□ 0.32
SMPD4-216ENST00000461187 TRAF7Q6Q0C0 670 aa17.03■□□□□ 0.32
SMPD4-216ENST00000461187 RALYLQ86SE5 291 aaKnown RBP17.03■□□□□ 0.32
SMPD4-216ENST00000461187 IGDCC4Q8TDY8 1250 aa17.03■□□□□ 0.32
SMPD4-216ENST00000461187 C16orf70Q9BSU1 422 aa17.03■□□□□ 0.32
SMPD4-216ENST00000461187 FRMPD4Q14CM0 1322 aa17.02■□□□□ 0.32
SMPD4-216ENST00000461187 ATG2AQ2TAZ0 1938 aa17.02■□□□□ 0.32
SMPD4-216ENST00000461187 RALGAPA2Q2PPJ7 1873 aa17.02■□□□□ 0.32
SMPD4-216ENST00000461187 RBAK-RBAKDNI3L0D1 243 aa17.02■□□□□ 0.32
SMPD4-216ENST00000461187 TLL1O43897 1013 aa17.02■□□□□ 0.32
SMPD4-216ENST00000461187 SART3Q15020 963 aaKnown RBP17.02■□□□□ 0.32
SMPD4-216ENST00000461187 ZNF618Q5T7W0 954 aa17.02■□□□□ 0.32
SMPD4-216ENST00000461187 KRT40Q6A162 431 aa17.02■□□□□ 0.32
SMPD4-216ENST00000461187 SPRED2Q7Z698 418 aa17.02■□□□□ 0.32
SMPD4-216ENST00000461187 TMCO2Q7Z6W1 182 aaPredicted RBP17.02■□□□□ 0.32
SMPD4-216ENST00000461187 MB21D2Q8IYB1 491 aaPredicted RBP17.02■□□□□ 0.32
SMPD4-216ENST00000461187 ADAMTS19Q8TE59 1207 aa17.02■□□□□ 0.32
SMPD4-216ENST00000461187 ARNTL2Q8WYA1 636 aa17.02■□□□□ 0.32
SMPD4-216ENST00000461187 MAP4K1Q92918 833 aa17.02■□□□□ 0.32
SMPD4-216ENST00000461187 TSPYL2Q9H2G4 693 aaPredicted RBP17.02■□□□□ 0.32
SMPD4-216ENST00000461187 BCAS3Q9H6U6 928 aa17.02■□□□□ 0.32
SMPD4-216ENST00000461187 MYO7AQ13402 2215 aa17.02■□□□□ 0.32
SMPD4-216ENST00000461187 LCHNA4D1U4 455 aa17.01■□□□□ 0.31
SMPD4-216ENST00000461187 GTPBP6O43824 516 aaPredicted RBP17.01■□□□□ 0.31
SMPD4-216ENST00000461187 MRPS9P82933 396 aaKnown RBP17.01■□□□□ 0.31
SMPD4-216ENST00000461187 MBTPS1Q14703 1052 aa17.01■□□□□ 0.31
SMPD4-216ENST00000461187 CATIPQ7Z7H3 387 aa17.01■□□□□ 0.31
SMPD4-216ENST00000461187 MLXIPQ9HAP2 919 aa17.01■□□□□ 0.31
SMPD4-216ENST00000461187 WDR81Q562E7 1941 aa17■□□□□ 0.31
SMPD4-216ENST00000461187 ABHD14A-ACY1A0A1B0GW23 586 aa17■□□□□ 0.31
SMPD4-216ENST00000461187 ICAM3P32942 547 aa17■□□□□ 0.31
SMPD4-216ENST00000461187 TFF2Q03403 129 aa17■□□□□ 0.31
SMPD4-216ENST00000461187 SERINC5Q86VE9 423 aa17■□□□□ 0.31
SMPD4-216ENST00000461187 PIBF1Q8WXW3 757 aa17■□□□□ 0.31
SMPD4-216ENST00000461187 RBM8AQ9Y5S9 174 aaKnown RBP17■□□□□ 0.31
SMPD4-216ENST00000461187 LPXNO60711 386 aa16.99■□□□□ 0.31
SMPD4-216ENST00000461187 STAM2O75886 525 aa16.99■□□□□ 0.31
SMPD4-216ENST00000461187 GJB5O95377 273 aa16.99■□□□□ 0.31
SMPD4-216ENST00000461187 HOXC8P31273 242 aa16.99■□□□□ 0.31
SMPD4-216ENST00000461187 IRX6P78412 446 aaPredicted RBP16.99■□□□□ 0.31
SMPD4-216ENST00000461187 SEMA3FQ13275 785 aa16.99■□□□□ 0.31
SMPD4-216ENST00000461187 GRB10Q13322 594 aa16.99■□□□□ 0.31
SMPD4-216ENST00000461187 INPP4AQ96PE3 977 aaPredicted RBP16.99■□□□□ 0.31
SMPD4-216ENST00000461187 UHRF1Q96T88 793 aaPredicted RBP16.99■□□□□ 0.31
SMPD4-216ENST00000461187 MAP3K14Q99558 947 aa16.99■□□□□ 0.31
SMPD4-216ENST00000461187 ZBED2Q9BTP6 218 aa16.99■□□□□ 0.31
SMPD4-216ENST00000461187 SPZ1Q9BXG8 430 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms