RNA–Protein interactions for RNA: ENST00000460962.5

GCOM1-203, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 3,156 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-203ENST00000460962 SH3GL2Q99962 352 aa13.37□□□□□ -0.27
GCOM1-203ENST00000460962 COL4A3BPQ9Y5P4 624 aa13.37□□□□□ -0.27
GCOM1-203ENST00000460962 FRMPD2Q68DX3 1309 aaPredicted RBP13.37□□□□□ -0.27
GCOM1-203ENST00000460962 TRAF5O00463 557 aa13.36□□□□□ -0.27
GCOM1-203ENST00000460962 HOXA7P31268 230 aaPredicted RBP13.36□□□□□ -0.27
GCOM1-203ENST00000460962 GLE1Q53GS7 698 aaKnown RBP13.36□□□□□ -0.27
GCOM1-203ENST00000460962 HGSNATQ68CP4 663 aa13.36□□□□□ -0.27
GCOM1-203ENST00000460962 SLC51AQ86UW1 340 aa13.36□□□□□ -0.27
GCOM1-203ENST00000460962 TSEN2Q8NCE0 465 aaKnown RBP13.36□□□□□ -0.27
GCOM1-203ENST00000460962 NUDT12Q9BQG2 462 aa13.36□□□□□ -0.27
GCOM1-203ENST00000460962 NUCKS1Q9H1E3 243 aaKnown RBP13.36□□□□□ -0.27
GCOM1-203ENST00000460962 CCT5P48643 541 aa13.36□□□□□ -0.27
GCOM1-203ENST00000460962 TNNI2P48788 182 aa13.36□□□□□ -0.27
GCOM1-203ENST00000460962 FKBP3Q00688 224 aaKnown RBP13.36□□□□□ -0.27
GCOM1-203ENST00000460962 KCNMA1Q12791 1236 aa13.36□□□□□ -0.27
GCOM1-203ENST00000460962 SFMBT2Q5VUG0 894 aa13.36□□□□□ -0.27
GCOM1-203ENST00000460962 KCNK18Q7Z418 384 aa13.36□□□□□ -0.27
GCOM1-203ENST00000460962 EFCAB13Q8IY85 973 aa13.36□□□□□ -0.27
GCOM1-203ENST00000460962 CAVIN3Q969G5 261 aa13.36□□□□□ -0.27
GCOM1-203ENST00000460962 MS4A14Q96JA4 679 aa13.36□□□□□ -0.27
GCOM1-203ENST00000460962 GPR101Q96P66 508 aaPredicted RBP13.36□□□□□ -0.27
GCOM1-203ENST00000460962 FAM107BQ9H098 131 aa13.36□□□□□ -0.27
GCOM1-203ENST00000460962 RIOX1Q9H6W3 641 aa13.36□□□□□ -0.27
GCOM1-203ENST00000460962 CEP72Q9P209 647 aa13.36□□□□□ -0.27
GCOM1-203ENST00000460962 TNFRSF8P28908 595 aa13.36□□□□□ -0.27
GCOM1-203ENST00000460962 DNA2P51530 1060 aa13.36□□□□□ -0.27
GCOM1-203ENST00000460962 GNGT1P63211 74 aa13.36□□□□□ -0.27
GCOM1-203ENST00000460962 TMC4Q7Z404 712 aa13.36□□□□□ -0.27
GCOM1-203ENST00000460962 IFT20Q8IY31 132 aa13.36□□□□□ -0.27
GCOM1-203ENST00000460962 RNF14Q9UBS8 474 aa13.36□□□□□ -0.27
GCOM1-203ENST00000460962 SPATA31A5Q5VU36 1347 aa13.35□□□□□ -0.27
GCOM1-203ENST00000460962 SPATA31A7Q8IWB4 1347 aa13.35□□□□□ -0.27
GCOM1-203ENST00000460962 SHTN1A0MZ66 631 aa13.35□□□□□ -0.27
GCOM1-203ENST00000460962 EBAG9O00559 213 aa13.35□□□□□ -0.27
GCOM1-203ENST00000460962 MARCH6O60337 910 aa13.35□□□□□ -0.27
GCOM1-203ENST00000460962 SERPING1P05155 500 aa13.35□□□□□ -0.27
GCOM1-203ENST00000460962 EHHADHQ08426 723 aa13.35□□□□□ -0.27
GCOM1-203ENST00000460962 NFIXQ14938 502 aa13.35□□□□□ -0.27
GCOM1-203ENST00000460962 TMEM119Q4V9L6 283 aa13.35□□□□□ -0.27
GCOM1-203ENST00000460962 FAM83BQ5T0W9 1011 aa13.35□□□□□ -0.27
GCOM1-203ENST00000460962 ARHGAP27Q6ZUM4 889 aa13.35□□□□□ -0.27
GCOM1-203ENST00000460962 BCAS4Q8TDM0 211 aa13.35□□□□□ -0.27
GCOM1-203ENST00000460962 EFCC1Q9HA90 598 aa13.35□□□□□ -0.27
GCOM1-203ENST00000460962 GNPATO15228 680 aa13.35□□□□□ -0.27
GCOM1-203ENST00000460962 EIF3HO15372 352 aaKnown RBP eCLIP13.35□□□□□ -0.27
GCOM1-203ENST00000460962 RPS6KA4O75676 772 aa13.35□□□□□ -0.27
GCOM1-203ENST00000460962 SSBP05455 408 aaKnown RBP eCLIP13.35□□□□□ -0.27
GCOM1-203ENST00000460962 PDHBP11177 359 aa13.35□□□□□ -0.27
GCOM1-203ENST00000460962 COASYQ13057 564 aa13.35□□□□□ -0.27
GCOM1-203ENST00000460962 LSM14BQ9BX40 385 aaKnown RBP13.35□□□□□ -0.27
GCOM1-203ENST00000460962 RBAK-RBAKDNI3L0D1 243 aa13.34□□□□□ -0.27
GCOM1-203ENST00000460962 EPB41P11171 864 aaKnown RBP13.34□□□□□ -0.27
GCOM1-203ENST00000460962 PLCG2P16885 1265 aa13.34□□□□□ -0.27
GCOM1-203ENST00000460962 POLR2FP61218 127 aaKnown RBP13.34□□□□□ -0.27
GCOM1-203ENST00000460962 FAM26FQ5R3K3 315 aa13.34□□□□□ -0.27
GCOM1-203ENST00000460962 FOXR2Q6PJQ5 311 aa13.34□□□□□ -0.27
GCOM1-203ENST00000460962 ARL8AQ96BM9 186 aa13.34□□□□□ -0.27
GCOM1-203ENST00000460962 EHD4Q9H223 541 aa13.34□□□□□ -0.27
GCOM1-203ENST00000460962 RABEP2Q9H5N1 569 aa13.34□□□□□ -0.27
GCOM1-203ENST00000460962 BMP2KQ9NSY1 1161 aaPredicted RBP13.34□□□□□ -0.27
GCOM1-203ENST00000460962 GPR75-ASB3A0A0A6YYF3 556 aa13.34□□□□□ -0.27
GCOM1-203ENST00000460962 PALMO75781 387 aa13.34□□□□□ -0.27
GCOM1-203ENST00000460962 NNTQ13423 1086 aa13.34□□□□□ -0.27
GCOM1-203ENST00000460962 GRAPQ13588 217 aa13.34□□□□□ -0.27
GCOM1-203ENST00000460962 PACS2Q86VP3 889 aa13.34□□□□□ -0.27
GCOM1-203ENST00000460962 GRAPLQ8TC17 118 aaPredicted RBP13.34□□□□□ -0.27
GCOM1-203ENST00000460962 SYN2Q92777 582 aaPredicted RBP13.34□□□□□ -0.27
GCOM1-203ENST00000460962 PANK4Q9NVE7 773 aa13.34□□□□□ -0.27
GCOM1-203ENST00000460962 HEXIM1O94992 359 aaKnown RBP13.34□□□□□ -0.27
GCOM1-203ENST00000460962 FTCDO95954 541 aa13.34□□□□□ -0.27
GCOM1-203ENST00000460962 SEPT2Q15019 361 aa13.34□□□□□ -0.27
GCOM1-203ENST00000460962 ZCWPW2Q504Y3 356 aa13.34□□□□□ -0.27
GCOM1-203ENST00000460962 TTMPQ5BVD1 217 aa13.34□□□□□ -0.27
GCOM1-203ENST00000460962 TTC19Q6DKK2 380 aaPredicted RBP13.34□□□□□ -0.27
GCOM1-203ENST00000460962 ZIM3Q96PE6 472 aa13.34□□□□□ -0.27
GCOM1-203ENST00000460962 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.34□□□□□ -0.27
GCOM1-203ENST00000460962 TBC1D7Q9P0N9 293 aa13.34□□□□□ -0.27
GCOM1-203ENST00000460962 ATP6V0A2Q9Y487 856 aa13.34□□□□□ -0.27
GCOM1-203ENST00000460962 DDX60LQ5H9U9 1706 aaKnown RBP13.34□□□□□ -0.27
GCOM1-203ENST00000460962 EDIL3O43854 480 aa13.33□□□□□ -0.28
GCOM1-203ENST00000460962 TLR2O60603 784 aa13.33□□□□□ -0.28
GCOM1-203ENST00000460962 NOL4O94818 638 aa13.33□□□□□ -0.28
GCOM1-203ENST00000460962 GLI1P08151 1106 aa13.33□□□□□ -0.28
GCOM1-203ENST00000460962 GUCY2DQ02846 1103 aa13.33□□□□□ -0.28
GCOM1-203ENST00000460962 ARID5AQ03989 594 aa13.33□□□□□ -0.28
GCOM1-203ENST00000460962 PAK2Q13177 524 aa13.33□□□□□ -0.28
GCOM1-203ENST00000460962 RAPGEF1Q13905 1077 aa13.33□□□□□ -0.28
GCOM1-203ENST00000460962 ASPRV1Q53RT3 343 aa13.33□□□□□ -0.28
GCOM1-203ENST00000460962 BARGINQ6ZT62 677 aa13.33□□□□□ -0.28
GCOM1-203ENST00000460962 LRRC47Q8N1G4 583 aaKnown RBP13.33□□□□□ -0.28
GCOM1-203ENST00000460962 IFT81Q8WYA0 676 aa13.33□□□□□ -0.28
GCOM1-203ENST00000460962 TBC1D5Q92609 795 aa13.33□□□□□ -0.28
GCOM1-203ENST00000460962 DNAJC19Q96DA6 116 aa13.33□□□□□ -0.28
GCOM1-203ENST00000460962 EPB41L5Q9HCM4 733 aa13.33□□□□□ -0.28
GCOM1-203ENST00000460962 DDX25Q9UHL0 483 aaKnown RBP13.33□□□□□ -0.28
GCOM1-203ENST00000460962 NFU1Q9UMS0 254 aa13.33□□□□□ -0.28
GCOM1-203ENST00000460962 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.33□□□□□ -0.28
GCOM1-203ENST00000460962 GRIN2DO15399 1336 aa13.33□□□□□ -0.28
GCOM1-203ENST00000460962 A0A087WUV0 522 aaPredicted RBP13.33□□□□□ -0.28
GCOM1-203ENST00000460962 ESYT3A0FGR9 886 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms