RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 CDC37Q16543 378 aaPredicted RBP20.13■□□□□ 0.81
HPS3-202ENST00000460120 SLFN13Q68D06 897 aa20.13■□□□□ 0.81
HPS3-202ENST00000460120 POTEGQ6S5H5 508 aa20.13■□□□□ 0.81
HPS3-202ENST00000460120 POTEEQ6S8J3 1075 aa20.13■□□□□ 0.81
HPS3-202ENST00000460120 TMC4Q7Z404 712 aa20.13■□□□□ 0.81
HPS3-202ENST00000460120 MYOCDQ8IZQ8 938 aa20.13■□□□□ 0.81
HPS3-202ENST00000460120 SPICE1Q8N0Z3 855 aa20.13■□□□□ 0.81
HPS3-202ENST00000460120 BBXQ8WY36 941 aaPredicted RBP20.13■□□□□ 0.81
HPS3-202ENST00000460120 ERGIC2Q96RQ1 377 aa20.13■□□□□ 0.81
HPS3-202ENST00000460120 CAPN6Q9Y6Q1 641 aa20.13■□□□□ 0.81
HPS3-202ENST00000460120 hCG_1984214I3L0E3 225 aa20.12■□□□□ 0.81
HPS3-202ENST00000460120 MMP10P09238 476 aa20.12■□□□□ 0.81
HPS3-202ENST00000460120 MAN2A1Q16706 1144 aa20.12■□□□□ 0.81
HPS3-202ENST00000460120 CERKLQ49MI3 558 aaPredicted RBP20.12■□□□□ 0.81
HPS3-202ENST00000460120 PRR16Q569H4 304 aa20.12■□□□□ 0.81
HPS3-202ENST00000460120 TDRD12Q587J7 1177 aaKnown RBP20.12■□□□□ 0.81
HPS3-202ENST00000460120 HERC4Q5GLZ8 1057 aaPredicted RBP20.12■□□□□ 0.81
HPS3-202ENST00000460120 GPBP1Q86WP2 473 aa20.12■□□□□ 0.81
HPS3-202ENST00000460120 GUF1Q8N442 669 aaKnown RBP20.12■□□□□ 0.81
HPS3-202ENST00000460120 ZNF713Q8N859 430 aaPredicted RBP20.12■□□□□ 0.81
HPS3-202ENST00000460120 MSANTD4Q8NCY6 345 aa20.12■□□□□ 0.81
HPS3-202ENST00000460120 TSG101Q99816 390 aa20.12■□□□□ 0.81
HPS3-202ENST00000460120 SIK3Q9Y2K2 1263 aa20.12■□□□□ 0.81
HPS3-202ENST00000460120 PVALEFA0A1B0GWK0 134 aa20.12■□□□□ 0.81
HPS3-202ENST00000460120 EIF3CLB5ME19 914 aaKnown RBP20.12■□□□□ 0.81
HPS3-202ENST00000460120 ERLIN1O75477 346 aa20.12■□□□□ 0.81
HPS3-202ENST00000460120 CLK2P49760 499 aaKnown RBP20.12■□□□□ 0.81
HPS3-202ENST00000460120 KIF11P52732 1056 aa20.12■□□□□ 0.81
HPS3-202ENST00000460120 PDIA5Q14554 519 aa20.12■□□□□ 0.81
HPS3-202ENST00000460120 TMEM119Q4V9L6 283 aa20.12■□□□□ 0.81
HPS3-202ENST00000460120 COL23A1Q86Y22 540 aaPredicted RBP20.12■□□□□ 0.81
HPS3-202ENST00000460120 SECISBP2LQ93073 1101 aaKnown RBP20.12■□□□□ 0.81
HPS3-202ENST00000460120 EIF3CQ99613 913 aaKnown RBP20.12■□□□□ 0.81
HPS3-202ENST00000460120 PLIN4Q96Q06 1357 aa20.12■□□□□ 0.81
HPS3-202ENST00000460120 FAM170AA1A519 330 aa20.11■□□□□ 0.81
HPS3-202ENST00000460120 HSPA1LP34931 641 aa20.11■□□□□ 0.81
HPS3-202ENST00000460120 NAP1L1P55209 391 aaKnown RBP20.11■□□□□ 0.81
HPS3-202ENST00000460120 GFPT1Q06210 699 aaPredicted RBP20.11■□□□□ 0.81
HPS3-202ENST00000460120 FAM26FQ5R3K3 315 aa20.11■□□□□ 0.81
HPS3-202ENST00000460120 GPATCH4Q5T3I0 446 aaKnown RBP20.11■□□□□ 0.81
HPS3-202ENST00000460120 LRRC55Q6ZSA7 311 aa20.11■□□□□ 0.81
HPS3-202ENST00000460120 RETREG2Q8NC44 543 aa20.11■□□□□ 0.81
HPS3-202ENST00000460120 CCDC102AQ96A19 550 aa20.11■□□□□ 0.81
HPS3-202ENST00000460120 DNAJC19Q96DA6 116 aa20.11■□□□□ 0.81
HPS3-202ENST00000460120 VPS18Q9P253 973 aa20.11■□□□□ 0.81
HPS3-202ENST00000460120 PDE2AO00408 941 aaPredicted RBP20.11■□□□□ 0.81
HPS3-202ENST00000460120 HOXA13P31271 388 aaPredicted RBP20.11■□□□□ 0.81
HPS3-202ENST00000460120 ZFP91Q96JP5 570 aaPredicted RBP20.11■□□□□ 0.81
HPS3-202ENST00000460120 P2RX7Q99572 595 aaKnown RBP20.11■□□□□ 0.81
HPS3-202ENST00000460120 EHD2Q9NZN4 543 aa20.11■□□□□ 0.81
HPS3-202ENST00000460120 PCDHA13Q9Y5I0 950 aa20.11■□□□□ 0.81
HPS3-202ENST00000460120 NCK2O43639 380 aa20.11■□□□□ 0.81
HPS3-202ENST00000460120 BUB1O43683 1085 aa20.11■□□□□ 0.81
HPS3-202ENST00000460120 PLA2G4BP0C869 781 aa20.11■□□□□ 0.81
HPS3-202ENST00000460120 PPP4R3AQ6IN85 833 aa20.11■□□□□ 0.81
HPS3-202ENST00000460120 HDXQ7Z353 690 aa20.11■□□□□ 0.81
HPS3-202ENST00000460120 ANO3Q9BYT9 981 aa20.11■□□□□ 0.81
HPS3-202ENST00000460120 CYP4A11Q02928 519 aa20.1■□□□□ 0.81
HPS3-202ENST00000460120 TUBB2AQ13885 445 aa20.1■□□□□ 0.81
HPS3-202ENST00000460120 SLC27A3Q5K4L6 730 aa20.1■□□□□ 0.81
HPS3-202ENST00000460120 KRT27Q7Z3Y8 459 aa20.1■□□□□ 0.81
HPS3-202ENST00000460120 TUBB2BQ9BVA1 445 aa20.1■□□□□ 0.81
HPS3-202ENST00000460120 RAB21Q9UL25 225 aa20.1■□□□□ 0.81
HPS3-202ENST00000460120 ATP8B1O43520 1251 aa20.1■□□□□ 0.81
HPS3-202ENST00000460120 MED24O75448 989 aa20.1■□□□□ 0.81
HPS3-202ENST00000460120 NPR1P16066 1061 aa20.1■□□□□ 0.81
HPS3-202ENST00000460120 PPP1R2P41236 205 aa20.1■□□□□ 0.81
HPS3-202ENST00000460120 VAV2P52735 878 aa20.1■□□□□ 0.81
HPS3-202ENST00000460120 PSMC6P62333 389 aa20.1■□□□□ 0.81
HPS3-202ENST00000460120 CCDC170Q8IYT3 715 aa20.1■□□□□ 0.81
HPS3-202ENST00000460120 PLEKHA4Q9H4M7 779 aa20.1■□□□□ 0.81
HPS3-202ENST00000460120 BCAS3Q9H6U6 928 aa20.1■□□□□ 0.81
HPS3-202ENST00000460120 BMP2KQ9NSY1 1161 aaPredicted RBP20.1■□□□□ 0.81
HPS3-202ENST00000460120 UBR3Q6ZT12 1888 aa20.09■□□□□ 0.81
HPS3-202ENST00000460120 POTEB2H3BUK9 544 aa20.09■□□□□ 0.81
HPS3-202ENST00000460120 ICA1Q05084 483 aa20.09■□□□□ 0.81
HPS3-202ENST00000460120 PABPC4Q13310 644 aaKnown RBP eCLIP20.09■□□□□ 0.81
HPS3-202ENST00000460120 SH3BP5LQ7L8J4 393 aa20.09■□□□□ 0.81
HPS3-202ENST00000460120 KLRG2A4D1S0 409 aaPredicted RBP20.09■□□□□ 0.81
HPS3-202ENST00000460120 RASSF7Q02833 373 aa20.09■□□□□ 0.81
HPS3-202ENST00000460120 ORC2Q13416 577 aaPredicted RBP20.09■□□□□ 0.81
HPS3-202ENST00000460120 CASP8Q14790 479 aa20.09■□□□□ 0.81
HPS3-202ENST00000460120 TRERF1Q96PN7 1200 aa20.09■□□□□ 0.81
HPS3-202ENST00000460120 LSM14BQ9BX40 385 aaKnown RBP20.09■□□□□ 0.81
HPS3-202ENST00000460120 L1RE1Q9UN81 338 aa20.09■□□□□ 0.81
HPS3-202ENST00000460120 PLAGL2Q9UPG8 496 aa20.09■□□□□ 0.81
HPS3-202ENST00000460120 LRRIQ3A6PVS8 624 aaPredicted RBP20.08■□□□□ 0.81
HPS3-202ENST00000460120 LRRC63Q05C16 580 aa20.08■□□□□ 0.81
HPS3-202ENST00000460120 AEBP2Q6ZN18 517 aaPredicted RBP20.08■□□□□ 0.81
HPS3-202ENST00000460120 COG1Q8WTW3 980 aa20.08■□□□□ 0.81
HPS3-202ENST00000460120 UBXN6Q9BZV1 441 aa20.08■□□□□ 0.81
HPS3-202ENST00000460120 TDRD3Q9H7E2 651 aaKnown RBP20.08■□□□□ 0.81
HPS3-202ENST00000460120 FAM198AQ9UFP1 575 aa20.08■□□□□ 0.81
HPS3-202ENST00000460120 FGFR1OPO95684 399 aaKnown RBP20.08■□□□□ 0.8
HPS3-202ENST00000460120 LMAN1P49257 510 aa20.08■□□□□ 0.8
HPS3-202ENST00000460120 POLR2FP61218 127 aaKnown RBP20.08■□□□□ 0.8
HPS3-202ENST00000460120 KCNMA1Q12791 1236 aa20.08■□□□□ 0.8
HPS3-202ENST00000460120 NFRKBQ6P4R8 1299 aa20.08■□□□□ 0.8
HPS3-202ENST00000460120 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.08■□□□□ 0.8
HPS3-202ENST00000460120 COL4A3BPQ9Y5P4 624 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms