RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 TMTC3Q6ZXV5 915 aa11.53□□□□□ -0.56
HDLBP-228ENST00000459788 SRBD1Q8N5C6 995 aaKnown RBP11.53□□□□□ -0.56
HDLBP-228ENST00000459788 RETREG2Q8NC44 543 aa11.53□□□□□ -0.56
HDLBP-228ENST00000459788 SMARCC2Q8TAQ2 1214 aa11.53□□□□□ -0.56
HDLBP-228ENST00000459788 KAT2BQ92831 832 aa11.53□□□□□ -0.56
HDLBP-228ENST00000459788 TRMT13Q9NUP7 481 aaKnown RBP11.53□□□□□ -0.56
HDLBP-228ENST00000459788 GTF2IRD1Q9UHL9 959 aa11.53□□□□□ -0.56
HDLBP-228ENST00000459788 NOD1Q9Y239 953 aa11.53□□□□□ -0.56
HDLBP-228ENST00000459788 TRANK1O15050 2925 aa11.52□□□□□ -0.57
HDLBP-228ENST00000459788 CCDC196A0A1B0GTZ2 297 aa11.52□□□□□ -0.57
HDLBP-228ENST00000459788 SPATA31C2B4DYI2 1134 aa11.52□□□□□ -0.57
HDLBP-228ENST00000459788 MEIS2O14770 477 aa11.52□□□□□ -0.57
HDLBP-228ENST00000459788 BAIAP3O94812 1187 aa11.52□□□□□ -0.57
HDLBP-228ENST00000459788 REC8O95072 547 aa11.52□□□□□ -0.57
HDLBP-228ENST00000459788 UBA1P22314 1058 aaKnown RBP11.52□□□□□ -0.57
HDLBP-228ENST00000459788 DNAJB2P25686 324 aa11.52□□□□□ -0.57
HDLBP-228ENST00000459788 PSEN2P49810 448 aa11.52□□□□□ -0.57
HDLBP-228ENST00000459788 PTGISQ16647 500 aa11.52□□□□□ -0.57
HDLBP-228ENST00000459788 FAM47CQ5HY64 1035 aa11.52□□□□□ -0.57
HDLBP-228ENST00000459788 METTL7BQ6UX53 244 aa11.52□□□□□ -0.57
HDLBP-228ENST00000459788 NLRX1Q86UT6 975 aa11.52□□□□□ -0.57
HDLBP-228ENST00000459788 FCHSD1Q86WN1 690 aa11.52□□□□□ -0.57
HDLBP-228ENST00000459788 C7orf31Q8N865 590 aa11.52□□□□□ -0.57
HDLBP-228ENST00000459788 PHOSPHO2Q8TCD6 241 aa11.52□□□□□ -0.57
HDLBP-228ENST00000459788 GPRASP2Q96D09 838 aa11.52□□□□□ -0.57
HDLBP-228ENST00000459788 SPATA33Q96N06 139 aa11.52□□□□□ -0.57
HDLBP-228ENST00000459788 USP26Q9BXU7 913 aa11.52□□□□□ -0.57
HDLBP-228ENST00000459788 PSTPIP2Q9H939 334 aa11.52□□□□□ -0.57
HDLBP-228ENST00000459788 EHMT1Q9H9B1 1298 aa11.52□□□□□ -0.57
HDLBP-228ENST00000459788 CHD9Q3L8U1 2897 aa11.52□□□□□ -0.57
HDLBP-228ENST00000459788 CDH23Q9H251 3354 aa11.51□□□□□ -0.57
HDLBP-228ENST00000459788 MYH9P35579 1960 aaKnown RBP11.51□□□□□ -0.57
HDLBP-228ENST00000459788 A0A0C4DFX4 3053 aa11.51□□□□□ -0.57
HDLBP-228ENST00000459788 ZBTB43O43298 467 aa11.51□□□□□ -0.57
HDLBP-228ENST00000459788 CAND2O75155 1236 aa11.51□□□□□ -0.57
HDLBP-228ENST00000459788 PLEKHA8P1O95397 391 aa11.51□□□□□ -0.57
HDLBP-228ENST00000459788 GGPS1O95749 300 aa11.51□□□□□ -0.57
HDLBP-228ENST00000459788 FOSP01100 380 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-228ENST00000459788 IQCF3P0C7M6 154 aa11.51□□□□□ -0.57
HDLBP-228ENST00000459788 CCL23P55773 120 aa11.51□□□□□ -0.57
HDLBP-228ENST00000459788 MRPS9P82933 396 aaKnown RBP11.51□□□□□ -0.57
HDLBP-228ENST00000459788 PTK7Q13308 1070 aa11.51□□□□□ -0.57
HDLBP-228ENST00000459788 MFSD10Q14728 455 aa11.51□□□□□ -0.57
HDLBP-228ENST00000459788 MCTP2Q6DN12 878 aa11.51□□□□□ -0.57
HDLBP-228ENST00000459788 IL31RAQ8NI17 732 aa11.51□□□□□ -0.57
HDLBP-228ENST00000459788 TIFAQ96CG3 184 aa11.51□□□□□ -0.57
HDLBP-228ENST00000459788 CDX2Q99626 313 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-228ENST00000459788 MYL10Q9BUA6 226 aa11.51□□□□□ -0.57
HDLBP-228ENST00000459788 TTYH1Q9H313 450 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-228ENST00000459788 MLXIPQ9HAP2 919 aa11.51□□□□□ -0.57
HDLBP-228ENST00000459788 MSRAQ9UJ68 235 aa11.51□□□□□ -0.57
HDLBP-228ENST00000459788 SLC4A7Q9Y6M7 1214 aa11.51□□□□□ -0.57
HDLBP-228ENST00000459788 MICAL3Q7RTP6 2002 aa11.51□□□□□ -0.57
HDLBP-228ENST00000459788 UMODL1Q5DID0 1318 aa11.51□□□□□ -0.57
HDLBP-228ENST00000459788 NID2Q14112 1375 aa11.51□□□□□ -0.57
HDLBP-228ENST00000459788 WDR81Q562E7 1941 aa11.5□□□□□ -0.57
HDLBP-228ENST00000459788 NCOR1O75376 2440 aa11.5□□□□□ -0.57
HDLBP-228ENST00000459788 SPDYE3A6NKU9 549 aa11.5□□□□□ -0.57
HDLBP-228ENST00000459788 EFCAB14O75071 495 aa11.5□□□□□ -0.57
HDLBP-228ENST00000459788 ACRP10323 421 aa11.5□□□□□ -0.57
HDLBP-228ENST00000459788 CYP2C9P11712 490 aa11.5□□□□□ -0.57
HDLBP-228ENST00000459788 SELPP16109 830 aa11.5□□□□□ -0.57
HDLBP-228ENST00000459788 HOXC8P31273 242 aa11.5□□□□□ -0.57
HDLBP-228ENST00000459788 HSPA4P34932 840 aa11.5□□□□□ -0.57
HDLBP-228ENST00000459788 SP2Q02086 613 aa11.5□□□□□ -0.57
HDLBP-228ENST00000459788 RTN1Q16799 776 aa11.5□□□□□ -0.57
HDLBP-228ENST00000459788 KIAA0753Q2KHM9 967 aa11.5□□□□□ -0.57
HDLBP-228ENST00000459788 HSDL1Q3SXM5 330 aa11.5□□□□□ -0.57
HDLBP-228ENST00000459788 SLC17A8Q8NDX2 589 aa11.5□□□□□ -0.57
HDLBP-228ENST00000459788 VWCEQ96DN2 955 aa11.5□□□□□ -0.57
HDLBP-228ENST00000459788 SLC9A7Q96T83 725 aa11.5□□□□□ -0.57
HDLBP-228ENST00000459788 C16orf70Q9BSU1 422 aa11.5□□□□□ -0.57
HDLBP-228ENST00000459788 PBX4Q9BYU1 374 aa11.5□□□□□ -0.57
HDLBP-228ENST00000459788 ZNF576Q9H609 170 aa11.5□□□□□ -0.57
HDLBP-228ENST00000459788 PCDHA11Q9Y5I1 949 aa11.5□□□□□ -0.57
HDLBP-228ENST00000459788 PTPRSQ13332 1948 aa11.5□□□□□ -0.57
HDLBP-228ENST00000459788 H3BRB1 525 aa11.49□□□□□ -0.57
HDLBP-228ENST00000459788 NOP56O00567 594 aaKnown RBP11.49□□□□□ -0.57
HDLBP-228ENST00000459788 CXCL10P02778 98 aa11.49□□□□□ -0.57
HDLBP-228ENST00000459788 RPLP2P05387 115 aaKnown RBP11.49□□□□□ -0.57
HDLBP-228ENST00000459788 NEFLP07196 543 aa11.49□□□□□ -0.57
HDLBP-228ENST00000459788 GNAT1P11488 350 aa11.49□□□□□ -0.57
HDLBP-228ENST00000459788 PSMA5P28066 241 aa11.49□□□□□ -0.57
HDLBP-228ENST00000459788 FUT2Q10981 343 aa11.49□□□□□ -0.57
HDLBP-228ENST00000459788 GDF6Q6KF10 455 aaPredicted RBP11.49□□□□□ -0.57
HDLBP-228ENST00000459788 USP17L6PQ6QN14 398 aa11.49□□□□□ -0.57
HDLBP-228ENST00000459788 FAM43BQ6ZT52 329 aaPredicted RBP11.49□□□□□ -0.57
HDLBP-228ENST00000459788 MICU3Q86XE3 530 aa11.49□□□□□ -0.57
HDLBP-228ENST00000459788 RASEFQ8IZ41 740 aa11.49□□□□□ -0.57
HDLBP-228ENST00000459788 CTAGE1Q96RT6 745 aa11.49□□□□□ -0.57
HDLBP-228ENST00000459788 AGXT2Q9BYV1 514 aa11.49□□□□□ -0.57
HDLBP-228ENST00000459788 TUT1Q9H6E5 874 aaKnown RBP11.49□□□□□ -0.57
HDLBP-228ENST00000459788 RIC8AQ9NPQ8 531 aa11.49□□□□□ -0.57
HDLBP-228ENST00000459788 HDAC6Q9UBN7 1215 aa11.49□□□□□ -0.57
HDLBP-228ENST00000459788 ZNF215Q9UL58 517 aaPredicted RBP11.49□□□□□ -0.57
HDLBP-228ENST00000459788 EMSYQ7Z589 1322 aa11.49□□□□□ -0.57
HDLBP-228ENST00000459788 CNTNAP5Q8WYK1 1306 aa11.49□□□□□ -0.57
HDLBP-228ENST00000459788 LGALS2P05162 132 aa11.48□□□□□ -0.57
HDLBP-228ENST00000459788 EVCP57679 992 aa11.48□□□□□ -0.57
HDLBP-228ENST00000459788 SEMA3FQ13275 785 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms