RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 VAV3Q9UKW4 847 aa27.45■■□□□ 1.98
U2AF1-204ENST00000459639 UBIAD1Q9Y5Z9 338 aa27.45■■□□□ 1.98
U2AF1-204ENST00000459639 CNMDO75829 334 aa27.44■■□□□ 1.98
U2AF1-204ENST00000459639 ZBTB48P10074 688 aaPredicted RBP27.44■■□□□ 1.98
U2AF1-204ENST00000459639 COPB2P35606 906 aa27.44■■□□□ 1.98
U2AF1-204ENST00000459639 ARHGEF16Q5VV41 709 aa27.44■■□□□ 1.98
U2AF1-204ENST00000459639 HAUS3Q68CZ6 603 aa27.44■■□□□ 1.98
U2AF1-204ENST00000459639 LRRC15Q8TF66 581 aa27.44■■□□□ 1.98
U2AF1-204ENST00000459639 GTF3C2Q8WUA4 911 aaPredicted RBP27.44■■□□□ 1.98
U2AF1-204ENST00000459639 BPIFA3Q9BQP9 254 aa27.44■■□□□ 1.98
U2AF1-204ENST00000459639 PFASO15067 1338 aa27.44■■□□□ 1.98
U2AF1-204ENST00000459639 ITGB5P18084 799 aa27.43■■□□□ 1.98
U2AF1-204ENST00000459639 MORC3Q14149 939 aa27.43■■□□□ 1.98
U2AF1-204ENST00000459639 CST9Q5W186 159 aa27.43■■□□□ 1.98
U2AF1-204ENST00000459639 ERMNQ8TAM6 284 aa27.43■■□□□ 1.98
U2AF1-204ENST00000459639 UIMC1Q96RL1 719 aa27.43■■□□□ 1.98
U2AF1-204ENST00000459639 NUDT12Q9BQG2 462 aa27.43■■□□□ 1.98
U2AF1-204ENST00000459639 PAGR1Q9BTK6 254 aa27.43■■□□□ 1.98
U2AF1-204ENST00000459639 NT5C3AQ9H0P0 336 aa27.43■■□□□ 1.98
U2AF1-204ENST00000459639 PSMD10O75832 226 aa27.43■■□□□ 1.98
U2AF1-204ENST00000459639 MRPS9P82933 396 aaKnown RBP27.43■■□□□ 1.98
U2AF1-204ENST00000459639 IQCB1Q15051 598 aa27.43■■□□□ 1.98
U2AF1-204ENST00000459639 LUZP1Q86V48 1076 aa27.43■■□□□ 1.98
U2AF1-204ENST00000459639 NSUN6Q8TEA1 469 aaKnown RBP27.43■■□□□ 1.98
U2AF1-204ENST00000459639 STAMQ92783 540 aa27.43■■□□□ 1.98
U2AF1-204ENST00000459639 ZNF577Q9BSK1 485 aa27.43■■□□□ 1.98
U2AF1-204ENST00000459639 JADE2Q9NQC1 790 aa27.43■■□□□ 1.98
U2AF1-204ENST00000459639 SLC25A27O95847 323 aa27.42■■□□□ 1.98
U2AF1-204ENST00000459639 CCT6AP40227 531 aaKnown RBP27.42■■□□□ 1.98
U2AF1-204ENST00000459639 LRCH2Q5VUJ6 765 aa27.42■■□□□ 1.98
U2AF1-204ENST00000459639 SPRYD7Q5W111 196 aa27.42■■□□□ 1.98
U2AF1-204ENST00000459639 CCL15-CCL14A0A0B4J2E2 113 aa27.41■■□□□ 1.98
U2AF1-204ENST00000459639 ARP10275 920 aa27.41■■□□□ 1.98
U2AF1-204ENST00000459639 CASP1P29466 404 aa27.41■■□□□ 1.98
U2AF1-204ENST00000459639 CUL4BQ13620 913 aa27.41■■□□□ 1.98
U2AF1-204ENST00000459639 CCL15Q16663 113 aa27.41■■□□□ 1.98
U2AF1-204ENST00000459639 ISM2Q6H9L7 571 aa27.41■■□□□ 1.98
U2AF1-204ENST00000459639 NCAPH2Q6IBW4 605 aa27.41■■□□□ 1.98
U2AF1-204ENST00000459639 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.41■■□□□ 1.98
U2AF1-204ENST00000459639 RIT2Q99578 217 aa27.41■■□□□ 1.98
U2AF1-204ENST00000459639 MOV10L1Q9BXT6 1211 aaKnown RBP27.41■■□□□ 1.98
U2AF1-204ENST00000459639 BLOC1S4Q9NUP1 217 aa27.41■■□□□ 1.98
U2AF1-204ENST00000459639 RBPJLQ9UBG7 517 aa27.41■■□□□ 1.98
U2AF1-204ENST00000459639 CCND2P30279 289 aa27.4■■□□□ 1.98
U2AF1-204ENST00000459639 PPP2R5CQ13362 524 aa27.4■■□□□ 1.98
U2AF1-204ENST00000459639 ANKRD23Q86SG2 305 aa27.4■■□□□ 1.98
U2AF1-204ENST00000459639 PURBQ96QR8 312 aaKnown RBP27.4■■□□□ 1.98
U2AF1-204ENST00000459639 WDR11Q9BZH6 1224 aa27.4■■□□□ 1.98
U2AF1-204ENST00000459639 BLZF1Q9H2G9 400 aa27.4■■□□□ 1.98
U2AF1-204ENST00000459639 PEX10O60683 326 aa27.4■■□□□ 1.98
U2AF1-204ENST00000459639 GAS7O60861 476 aa27.4■■□□□ 1.98
U2AF1-204ENST00000459639 BMP6P22004 513 aa27.4■■□□□ 1.98
U2AF1-204ENST00000459639 AMPD3Q01432 767 aa27.4■■□□□ 1.98
U2AF1-204ENST00000459639 OTOP1Q7RTM1 612 aa27.4■■□□□ 1.98
U2AF1-204ENST00000459639 NCAPG2Q86XI2 1143 aa27.4■■□□□ 1.98
U2AF1-204ENST00000459639 ANKRD35Q8N283 1001 aa27.4■■□□□ 1.98
U2AF1-204ENST00000459639 MLKLQ8NB16 471 aa27.4■■□□□ 1.98
U2AF1-204ENST00000459639 LARP4BQ92615 738 aaKnown RBP27.4■■□□□ 1.98
U2AF1-204ENST00000459639 ZFP91Q96JP5 570 aaPredicted RBP27.4■■□□□ 1.98
U2AF1-204ENST00000459639 KCNH7Q9NS40 1196 aa27.4■■□□□ 1.98
U2AF1-204ENST00000459639 RMND1Q9NWS8 449 aa27.4■■□□□ 1.98
U2AF1-204ENST00000459639 DACH1Q9UI36 760 aa27.4■■□□□ 1.98
U2AF1-204ENST00000459639 IPO5O00410 1097 aaKnown RBP27.39■■□□□ 1.97
U2AF1-204ENST00000459639 MYCLP12524 364 aaPredicted RBP27.39■■□□□ 1.97
U2AF1-204ENST00000459639 SEMA3FQ13275 785 aa27.39■■□□□ 1.97
U2AF1-204ENST00000459639 VSIG10LQ86VR7 867 aa27.39■■□□□ 1.97
U2AF1-204ENST00000459639 DNERQ8NFT8 737 aa27.39■■□□□ 1.97
U2AF1-204ENST00000459639 BRI3BPQ8WY22 251 aa27.39■■□□□ 1.97
U2AF1-204ENST00000459639 RAD54LQ92698 747 aa27.39■■□□□ 1.97
U2AF1-204ENST00000459639 TEKT3Q9BXF9 490 aa27.39■■□□□ 1.97
U2AF1-204ENST00000459639 TXNRD2Q9NNW7 524 aa27.39■■□□□ 1.97
U2AF1-204ENST00000459639 KIAA1217Q5T5P2 1943 aa27.38■■□□□ 1.97
U2AF1-204ENST00000459639 NR3C2P08235 984 aa27.38■■□□□ 1.97
U2AF1-204ENST00000459639 RPA1P27694 616 aa27.38■■□□□ 1.97
U2AF1-204ENST00000459639 MTMR1Q13613 665 aa27.38■■□□□ 1.97
U2AF1-204ENST00000459639 SV2BQ7L1I2 683 aa27.38■■□□□ 1.97
U2AF1-204ENST00000459639 DHX40Q8IX18 779 aaKnown RBP27.38■■□□□ 1.97
U2AF1-204ENST00000459639 BTBD19C9JJ37 291 aa27.37■■□□□ 1.97
U2AF1-204ENST00000459639 PDHXO00330 501 aa27.37■■□□□ 1.97
U2AF1-204ENST00000459639 HUNKP57058 714 aa27.37■■□□□ 1.97
U2AF1-204ENST00000459639 MKRN3Q13064 507 aaKnown RBP27.37■■□□□ 1.97
U2AF1-204ENST00000459639 ECM1Q16610 540 aa27.37■■□□□ 1.97
U2AF1-204ENST00000459639 C7orf25Q9BPX7 421 aa27.37■■□□□ 1.97
U2AF1-204ENST00000459639 POLR3CQ9BUI4 534 aaPredicted RBP27.37■■□□□ 1.97
U2AF1-204ENST00000459639 LRRC27Q9C0I9 530 aa27.37■■□□□ 1.97
U2AF1-204ENST00000459639 AGO4Q9HCK5 861 aaKnown RBP27.37■■□□□ 1.97
U2AF1-204ENST00000459639 BECN2A8MW95 431 aa27.36■■□□□ 1.97
U2AF1-204ENST00000459639 GOLGA6L19H0YKK7 550 aa27.36■■□□□ 1.97
U2AF1-204ENST00000459639 MED24O75448 989 aa27.36■■□□□ 1.97
U2AF1-204ENST00000459639 STAM2O75886 525 aa27.36■■□□□ 1.97
U2AF1-204ENST00000459639 RPN1P04843 607 aaKnown RBP27.36■■□□□ 1.97
U2AF1-204ENST00000459639 ERCC3P19447 782 aa27.36■■□□□ 1.97
U2AF1-204ENST00000459639 B3GNT9Q6UX72 402 aa27.36■■□□□ 1.97
U2AF1-204ENST00000459639 KCTD17Q8N5Z5 321 aa27.36■■□□□ 1.97
U2AF1-204ENST00000459639 TRIM9Q9C026 710 aa27.36■■□□□ 1.97
U2AF1-204ENST00000459639 POTEB3A0JP26 581 aa27.36■■□□□ 1.97
U2AF1-204ENST00000459639 KCNB1Q14721 858 aa27.36■■□□□ 1.97
U2AF1-204ENST00000459639 CT47A1Q5JQC4 288 aaPredicted RBP27.36■■□□□ 1.97
U2AF1-204ENST00000459639 POTEBQ6S5H4 581 aa27.36■■□□□ 1.97
U2AF1-204ENST00000459639 KCNK18Q7Z418 384 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms