RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 AKR1B10O60218 316 aa22.89■■□□□ 1.25
CRAT-207ENST00000458362 ONECUT3O60422 494 aaPredicted RBP22.89■■□□□ 1.25
CRAT-207ENST00000458362 TACC1O75410 805 aa22.89■■□□□ 1.25
CRAT-207ENST00000458362 SSBP05455 408 aaKnown RBP eCLIP22.89■■□□□ 1.25
CRAT-207ENST00000458362 TNNT3P45378 269 aaPredicted RBP22.89■■□□□ 1.25
CRAT-207ENST00000458362 TRIM58Q8NG06 486 aa22.89■■□□□ 1.25
CRAT-207ENST00000458362 MTMR8Q96EF0 704 aa22.89■■□□□ 1.25
CRAT-207ENST00000458362 GJD4Q96KN9 370 aaPredicted RBP22.89■■□□□ 1.25
CRAT-207ENST00000458362 COA1Q9GZY4 146 aa22.89■■□□□ 1.25
CRAT-207ENST00000458362 DEF6Q9H4E7 631 aa22.89■■□□□ 1.25
CRAT-207ENST00000458362 PSTPIP2Q9H939 334 aa22.89■■□□□ 1.25
CRAT-207ENST00000458362 ATF5Q9Y2D1 282 aaPredicted RBP22.89■■□□□ 1.25
CRAT-207ENST00000458362 JRKLQ9Y4A0 524 aa22.89■■□□□ 1.25
CRAT-207ENST00000458362 E9PMD0 336 aa22.88■■□□□ 1.25
CRAT-207ENST00000458362 MPHOSPH10O00566 681 aaKnown RBP22.88■■□□□ 1.25
CRAT-207ENST00000458362 PHACTR2O75167 634 aa22.88■■□□□ 1.25
CRAT-207ENST00000458362 MRPL12P52815 198 aaKnown RBP22.88■■□□□ 1.25
CRAT-207ENST00000458362 SP8Q8IXZ3 490 aa22.88■■□□□ 1.25
CRAT-207ENST00000458362 FAM71BQ8TC56 605 aa22.88■■□□□ 1.25
CRAT-207ENST00000458362 TANGO6Q9C0B7 1094 aa22.88■■□□□ 1.25
CRAT-207ENST00000458362 SALL4Q9UJQ4 1053 aa22.88■■□□□ 1.25
CRAT-207ENST00000458362 C10orf71Q711Q0 1435 aa22.88■■□□□ 1.25
CRAT-207ENST00000458362 NPHP3-ACAD11A0A0J9YXS1 232 aa22.88■■□□□ 1.25
CRAT-207ENST00000458362 MARCH6O60337 910 aa22.88■■□□□ 1.25
CRAT-207ENST00000458362 ASTE1Q2TB18 679 aaPredicted RBP22.88■■□□□ 1.25
CRAT-207ENST00000458362 FAM26FQ5R3K3 315 aa22.88■■□□□ 1.25
CRAT-207ENST00000458362 CDC42EP5Q6NZY7 148 aa22.88■■□□□ 1.25
CRAT-207ENST00000458362 GDAP1L1Q96MZ0 367 aa22.88■■□□□ 1.25
CRAT-207ENST00000458362 HPCAL4Q9UM19 191 aa22.88■■□□□ 1.25
CRAT-207ENST00000458362 PCDHA12Q9UN75 941 aa22.88■■□□□ 1.25
CRAT-207ENST00000458362 SPATA31A6Q5VVP1 1343 aa22.88■■□□□ 1.25
CRAT-207ENST00000458362 MCM3P25205 808 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 HYIQ5T013 277 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 PROM2Q8N271 834 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 COL4A3BPQ9Y5P4 624 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 ZC3H4Q9UPT8 1303 aaKnown RBP22.87■■□□□ 1.25
CRAT-207ENST00000458362 USP17L15C9J2P7 530 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 USP17L13C9JLJ4 530 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 USP17L11C9JVI0 530 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 USP17L18D6R9N7 530 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 USP17L22D6RA61 530 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 USP17L17D6RBQ6 530 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 USP17L19D6RCP7 530 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 USP17L20D6RJB6 530 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 TRAF5O00463 557 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 CACNB1Q02641 598 aaPredicted RBP22.87■■□□□ 1.25
CRAT-207ENST00000458362 GFPT1Q06210 699 aaPredicted RBP22.87■■□□□ 1.25
CRAT-207ENST00000458362 USP17L24Q0WX57 530 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 DOK7Q18PE1 504 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 SHROOM1Q2M3G4 852 aaPredicted RBP22.87■■□□□ 1.25
CRAT-207ENST00000458362 GPATCH4Q5T3I0 446 aaKnown RBP22.87■■□□□ 1.25
CRAT-207ENST00000458362 HGSNATQ68CP4 663 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 FOXR2Q6PJQ5 311 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 USP17L6PQ6QN14 398 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 ZFPM1Q8IX07 1006 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 ANKRD13CQ8N6S4 541 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 MYO3BQ8WXR4 1341 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 HINFPQ9BQA5 517 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 VIPAS39Q9H9C1 493 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 SUGT1Q9Y2Z0 365 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 PCDHA2Q9Y5H9 948 aa22.87■■□□□ 1.25
CRAT-207ENST00000458362 NOL4O94818 638 aa22.86■■□□□ 1.25
CRAT-207ENST00000458362 MAGEA1P43355 309 aa22.86■■□□□ 1.25
CRAT-207ENST00000458362 NFIAQ12857 509 aa22.86■■□□□ 1.25
CRAT-207ENST00000458362 EZH2Q15910 746 aaKnown RBP22.86■■□□□ 1.25
CRAT-207ENST00000458362 NFRKBQ6P4R8 1299 aa22.86■■□□□ 1.25
CRAT-207ENST00000458362 CCNI2Q6ZMN8 369 aaPredicted RBP22.86■■□□□ 1.25
CRAT-207ENST00000458362 NLRC4Q9NPP4 1024 aa22.86■■□□□ 1.25
CRAT-207ENST00000458362 KIAA1024Q9UPX6 916 aa22.86■■□□□ 1.25
CRAT-207ENST00000458362 ANKRD31Q8N7Z5 1873 aa22.86■■□□□ 1.25
CRAT-207ENST00000458362 NCK2O43639 380 aa22.85■■□□□ 1.25
CRAT-207ENST00000458362 SYF2O95926 243 aaKnown RBP22.85■■□□□ 1.25
CRAT-207ENST00000458362 GCFC2P16383 781 aaKnown RBP22.85■■□□□ 1.25
CRAT-207ENST00000458362 SLC1A4P43007 532 aa22.85■■□□□ 1.25
CRAT-207ENST00000458362 AARSP49588 968 aaKnown RBP eCLIP22.85■■□□□ 1.25
CRAT-207ENST00000458362 FKBP3Q00688 224 aaKnown RBP22.85■■□□□ 1.25
CRAT-207ENST00000458362 SEPT2Q15019 361 aa22.85■■□□□ 1.25
CRAT-207ENST00000458362 ZSCAN26Q16670 478 aa22.85■■□□□ 1.25
CRAT-207ENST00000458362 MAP9Q49MG5 647 aa22.85■■□□□ 1.25
CRAT-207ENST00000458362 CCDC40Q4G0X9 1142 aa22.85■■□□□ 1.25
CRAT-207ENST00000458362 HSP90B2PQ58FF3 399 aa22.85■■□□□ 1.25
CRAT-207ENST00000458362 MUM1L1Q5H9M0 696 aa22.85■■□□□ 1.25
CRAT-207ENST00000458362 CACNA2D4Q7Z3S7 1137 aa22.85■■□□□ 1.25
CRAT-207ENST00000458362 NELFCDQ8IXH7 590 aa22.85■■□□□ 1.25
CRAT-207ENST00000458362 SMARCAL1Q9NZC9 954 aa22.85■■□□□ 1.25
CRAT-207ENST00000458362 ATP6V0A2Q9Y487 856 aa22.85■■□□□ 1.25
CRAT-207ENST00000458362 POTEB3A0JP26 581 aa22.85■■□□□ 1.25
CRAT-207ENST00000458362 POTECB2RU33 542 aa22.85■■□□□ 1.25
CRAT-207ENST00000458362 HOXA7P31268 230 aaPredicted RBP22.85■■□□□ 1.25
CRAT-207ENST00000458362 APBA1Q02410 837 aa22.85■■□□□ 1.25
CRAT-207ENST00000458362 POTEBQ6S5H4 581 aa22.85■■□□□ 1.25
CRAT-207ENST00000458362 TMC4Q7Z404 712 aa22.85■■□□□ 1.25
CRAT-207ENST00000458362 ACBD3Q9H3P7 528 aa22.85■■□□□ 1.25
CRAT-207ENST00000458362 MED4Q9NPJ6 270 aa22.85■■□□□ 1.25
CRAT-207ENST00000458362 UBAP1LF5GYI3 381 aa22.84■■□□□ 1.25
CRAT-207ENST00000458362 PJA2O43164 708 aa22.84■■□□□ 1.25
CRAT-207ENST00000458362 TLR2O60603 784 aa22.84■■□□□ 1.25
CRAT-207ENST00000458362 PLA2G4BP0C869 781 aa22.84■■□□□ 1.25
CRAT-207ENST00000458362 STAT3P40763 770 aa22.84■■□□□ 1.25
CRAT-207ENST00000458362 MAPK8IP2Q13387 824 aaPredicted RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms