RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 BTBD18B2RXH4 712 aa16.11■□□□□ 0.17
SMPD4-215ENST00000457039 FAM86B1E9PN63 330 aa16.11■□□□□ 0.17
SMPD4-215ENST00000457039 MEIS1O00470 390 aa16.11■□□□□ 0.17
SMPD4-215ENST00000457039 FIBPO43427 364 aa16.11■□□□□ 0.17
SMPD4-215ENST00000457039 FAM86B2P0C5J1 330 aa16.11■□□□□ 0.17
SMPD4-215ENST00000457039 UBA1P22314 1058 aaKnown RBP16.11■□□□□ 0.17
SMPD4-215ENST00000457039 USP11P51784 963 aa16.11■□□□□ 0.17
SMPD4-215ENST00000457039 IRX5P78411 483 aaPredicted RBP16.11■□□□□ 0.17
SMPD4-215ENST00000457039 SP2Q02086 613 aa16.11■□□□□ 0.17
SMPD4-215ENST00000457039 GUCY1B3Q02153 619 aa16.11■□□□□ 0.17
SMPD4-215ENST00000457039 NONOQ15233 471 aaKnown RBP eCLIP16.11■□□□□ 0.17
SMPD4-215ENST00000457039 CEP55Q53EZ4 464 aa16.11■□□□□ 0.17
SMPD4-215ENST00000457039 NIPA1Q7RTP0 329 aa16.11■□□□□ 0.17
SMPD4-215ENST00000457039 NLRX1Q86UT6 975 aa16.11■□□□□ 0.17
SMPD4-215ENST00000457039 ARRDC4Q8NCT1 418 aa16.11■□□□□ 0.17
SMPD4-215ENST00000457039 TBCKQ8TEA7 893 aa16.11■□□□□ 0.17
SMPD4-215ENST00000457039 BRMS1Q9HCU9 246 aa16.11■□□□□ 0.17
SMPD4-215ENST00000457039 KIF3AQ9Y496 699 aa16.11■□□□□ 0.17
SMPD4-215ENST00000457039 DNM1LO00429 736 aa16.1■□□□□ 0.17
SMPD4-215ENST00000457039 MAFGO15525 162 aa16.1■□□□□ 0.17
SMPD4-215ENST00000457039 DYNC1LI2O43237 492 aaPredicted RBP16.1■□□□□ 0.17
SMPD4-215ENST00000457039 ARHGAP1Q07960 439 aa16.1■□□□□ 0.17
SMPD4-215ENST00000457039 PIK3AP1Q6ZUJ8 805 aa16.1■□□□□ 0.17
SMPD4-215ENST00000457039 DIS3LQ8TF46 1054 aaKnown RBP16.1■□□□□ 0.17
SMPD4-215ENST00000457039 EMID1Q96A84 441 aaPredicted RBP16.1■□□□□ 0.17
SMPD4-215ENST00000457039 CDHR1Q96JP9 859 aa16.1■□□□□ 0.17
SMPD4-215ENST00000457039 CCDC194A0A1B0GVG4 234 aa16.09■□□□□ 0.17
SMPD4-215ENST00000457039 FAM205CA6NFA0 338 aa16.09■□□□□ 0.17
SMPD4-215ENST00000457039 ATP9AO75110 1047 aa16.09■□□□□ 0.17
SMPD4-215ENST00000457039 FARP2O94887 1054 aaPredicted RBP16.09■□□□□ 0.17
SMPD4-215ENST00000457039 GH1P01241 217 aa16.09■□□□□ 0.17
SMPD4-215ENST00000457039 C6orf222P0C671 652 aaPredicted RBP16.09■□□□□ 0.17
SMPD4-215ENST00000457039 COL6A1P12109 1028 aa16.09■□□□□ 0.17
SMPD4-215ENST00000457039 KCNA2P16389 499 aa16.09■□□□□ 0.17
SMPD4-215ENST00000457039 MTMR1Q13613 665 aa16.09■□□□□ 0.17
SMPD4-215ENST00000457039 INF2Q27J81 1249 aa16.09■□□□□ 0.17
SMPD4-215ENST00000457039 RNF180Q86T96 592 aa16.09■□□□□ 0.17
SMPD4-215ENST00000457039 OR6J1Q8NGC5 347 aa16.09■□□□□ 0.17
SMPD4-215ENST00000457039 LENG9Q96B70 501 aa16.09■□□□□ 0.17
SMPD4-215ENST00000457039 MBOAT7Q96N66 472 aa16.09■□□□□ 0.17
SMPD4-215ENST00000457039 SENP7Q9BQF6 1050 aa16.09■□□□□ 0.17
SMPD4-215ENST00000457039 AP5M1Q9H0R1 490 aa16.09■□□□□ 0.17
SMPD4-215ENST00000457039 FOXP1Q9H334 677 aaPredicted RBP16.09■□□□□ 0.17
SMPD4-215ENST00000457039 BCAS3Q9H6U6 928 aa16.09■□□□□ 0.17
SMPD4-215ENST00000457039 SPC25Q9HBM1 224 aa16.09■□□□□ 0.17
SMPD4-215ENST00000457039 KCNH7Q9NS40 1196 aa16.09■□□□□ 0.17
SMPD4-215ENST00000457039 CYP3A7-CYP3A51PA0A087WV96 503 aa16.08■□□□□ 0.16
SMPD4-215ENST00000457039 A6NJR5 290 aa16.08■□□□□ 0.16
SMPD4-215ENST00000457039 ARP10275 920 aa16.08■□□□□ 0.16
SMPD4-215ENST00000457039 CYP3A7P24462 503 aa16.08■□□□□ 0.16
SMPD4-215ENST00000457039 ZNF76P36508 570 aa16.08■□□□□ 0.16
SMPD4-215ENST00000457039 RGS19P49795 217 aa16.08■□□□□ 0.16
SMPD4-215ENST00000457039 BEX3Q00994 111 aa16.08■□□□□ 0.16
SMPD4-215ENST00000457039 SAFBQ15424 915 aaKnown RBP eCLIP16.08■□□□□ 0.16
SMPD4-215ENST00000457039 FSCN1Q16658 493 aaKnown RBP16.08■□□□□ 0.16
SMPD4-215ENST00000457039 CELF3Q5SZQ8 465 aaKnown RBP16.08■□□□□ 0.16
SMPD4-215ENST00000457039 MYSM1Q5VVJ2 828 aa16.08■□□□□ 0.16
SMPD4-215ENST00000457039 MOXD1Q6UVY6 613 aa16.08■□□□□ 0.16
SMPD4-215ENST00000457039 TSEN34Q9BSV6 310 aaKnown RBP16.08■□□□□ 0.16
SMPD4-215ENST00000457039 PHF24Q9UPV7 400 aa16.08■□□□□ 0.16
SMPD4-215ENST00000457039 KIF28PB7ZC32 967 aa16.07■□□□□ 0.16
SMPD4-215ENST00000457039 CAPN15O75808 1086 aa16.07■□□□□ 0.16
SMPD4-215ENST00000457039 TDP2O95551 362 aa16.07■□□□□ 0.16
SMPD4-215ENST00000457039 GGPS1O95749 300 aa16.07■□□□□ 0.16
SMPD4-215ENST00000457039 U2AF2P26368 475 aaKnown RBP eCLIP16.07■□□□□ 0.16
SMPD4-215ENST00000457039 SETQ01105 290 aaPredicted RBP16.07■□□□□ 0.16
SMPD4-215ENST00000457039 LAMC2Q13753 1193 aa16.07■□□□□ 0.16
SMPD4-215ENST00000457039 NEDD9Q14511 834 aa16.07■□□□□ 0.16
SMPD4-215ENST00000457039 KCNA10Q16322 511 aa16.07■□□□□ 0.16
SMPD4-215ENST00000457039 GNASQ5JWF2 1037 aa16.07■□□□□ 0.16
SMPD4-215ENST00000457039 METTL7BQ6UX53 244 aa16.07■□□□□ 0.16
SMPD4-215ENST00000457039 NEK8Q86SG6 692 aa16.07■□□□□ 0.16
SMPD4-215ENST00000457039 PLA2G4DQ86XP0 818 aa16.07■□□□□ 0.16
SMPD4-215ENST00000457039 PAWRQ96IZ0 340 aaKnown RBP16.07■□□□□ 0.16
SMPD4-215ENST00000457039 AGO4Q9HCK5 861 aaKnown RBP16.07■□□□□ 0.16
SMPD4-215ENST00000457039 MOXD2PA6NHM9 499 aa16.06■□□□□ 0.16
SMPD4-215ENST00000457039 KBTBD13C9JR72 458 aa16.06■□□□□ 0.16
SMPD4-215ENST00000457039 HOXD8P13378 290 aaPredicted RBP16.06■□□□□ 0.16
SMPD4-215ENST00000457039 CPT1AP50416 773 aa16.06■□□□□ 0.16
SMPD4-215ENST00000457039 ITGB3BPQ13352 177 aaPredicted RBP16.06■□□□□ 0.16
SMPD4-215ENST00000457039 Q4G0T1 1027 aa16.06■□□□□ 0.16
SMPD4-215ENST00000457039 PRR16Q569H4 304 aa16.06■□□□□ 0.16
SMPD4-215ENST00000457039 LARP1BQ659C4 914 aaKnown RBP16.06■□□□□ 0.16
SMPD4-215ENST00000457039 NECAB2Q7Z6G3 386 aa16.06■□□□□ 0.16
SMPD4-215ENST00000457039 NOSTRINQ8IVI9 506 aa16.06■□□□□ 0.16
SMPD4-215ENST00000457039 DHX37Q8IY37 1157 aaKnown RBP16.06■□□□□ 0.16
SMPD4-215ENST00000457039 PCSK9Q8NBP7 692 aaKnown RBP16.06■□□□□ 0.16
SMPD4-215ENST00000457039 PPTC7Q8NI37 304 aa16.06■□□□□ 0.16
SMPD4-215ENST00000457039 AFG1LQ8WV93 481 aa16.06■□□□□ 0.16
SMPD4-215ENST00000457039 FOXD4L1Q9NU39 408 aa16.06■□□□□ 0.16
SMPD4-215ENST00000457039 NFASCO94856 1347 aa16.05■□□□□ 0.16
SMPD4-215ENST00000457039 WNT7AO00755 349 aa16.05■□□□□ 0.16
SMPD4-215ENST00000457039 DHX15O43143 795 aaKnown RBP16.05■□□□□ 0.16
SMPD4-215ENST00000457039 MYCNP04198 464 aaPredicted RBP16.05■□□□□ 0.16
SMPD4-215ENST00000457039 ASGR1P07306 291 aa16.05■□□□□ 0.16
SMPD4-215ENST00000457039 MMP3P08254 477 aa16.05■□□□□ 0.16
SMPD4-215ENST00000457039 ACLYP53396 1101 aa16.05■□□□□ 0.16
SMPD4-215ENST00000457039 LETM2Q2VYF4 491 aa16.05■□□□□ 0.16
SMPD4-215ENST00000457039 HSDL1Q3SXM5 330 aa16.05■□□□□ 0.16
SMPD4-215ENST00000457039 PPP4R3AQ6IN85 833 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms