RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 CRYGNQ8WXF5 182 aa11.51□□□□□ -0.57
ATG4A-206ENST00000457035 WASF1Q92558 559 aa11.51□□□□□ -0.57
ATG4A-206ENST00000457035 ALG1Q9BT22 464 aa11.51□□□□□ -0.57
ATG4A-206ENST00000457035 PHF20Q9BVI0 1012 aa11.51□□□□□ -0.57
ATG4A-206ENST00000457035 WDR11Q9BZH6 1224 aa11.51□□□□□ -0.57
ATG4A-206ENST00000457035 PCDHA4Q9UN74 947 aa11.51□□□□□ -0.57
ATG4A-206ENST00000457035 KCNJ14Q9UNX9 436 aa11.51□□□□□ -0.57
ATG4A-206ENST00000457035 EDIL3O43854 480 aa11.5□□□□□ -0.57
ATG4A-206ENST00000457035 ARIH2O95376 493 aa11.5□□□□□ -0.57
ATG4A-206ENST00000457035 RARBP10826 455 aa11.5□□□□□ -0.57
ATG4A-206ENST00000457035 PTGS1P23219 599 aa11.5□□□□□ -0.57
ATG4A-206ENST00000457035 CCND2P30279 289 aa11.5□□□□□ -0.57
ATG4A-206ENST00000457035 FXR1P51114 621 aaKnown RBP eCLIP11.5□□□□□ -0.57
ATG4A-206ENST00000457035 NKX3-2P78367 333 aa11.5□□□□□ -0.57
ATG4A-206ENST00000457035 SEPT14Q6ZU15 432 aa11.5□□□□□ -0.57
ATG4A-206ENST00000457035 UBE2Q1Q7Z7E8 422 aa11.5□□□□□ -0.57
ATG4A-206ENST00000457035 BLIDQ8IZY5 108 aa11.5□□□□□ -0.57
ATG4A-206ENST00000457035 REXO1Q8N1G1 1221 aaKnown RBP11.5□□□□□ -0.57
ATG4A-206ENST00000457035 DAGLBQ8NCG7 672 aa11.5□□□□□ -0.57
ATG4A-206ENST00000457035 RASGRP4Q8TDF6 673 aa11.5□□□□□ -0.57
ATG4A-206ENST00000457035 SCFD2Q8WU76 684 aa11.5□□□□□ -0.57
ATG4A-206ENST00000457035 SNX21Q969T3 373 aa11.5□□□□□ -0.57
ATG4A-206ENST00000457035 LENG1Q96BZ8 264 aaPredicted RBP11.5□□□□□ -0.57
ATG4A-206ENST00000457035 PGBD1Q96JS3 809 aa11.5□□□□□ -0.57
ATG4A-206ENST00000457035 ANO3Q9BYT9 981 aa11.5□□□□□ -0.57
ATG4A-206ENST00000457035 RTEL1Q9NZ71 1219 aa11.5□□□□□ -0.57
ATG4A-206ENST00000457035 DDX41Q9UJV9 622 aaKnown RBP11.5□□□□□ -0.57
ATG4A-206ENST00000457035 Q9Y3F1 56 aa11.5□□□□□ -0.57
ATG4A-206ENST00000457035 CTAGE5O15320 804 aa11.49□□□□□ -0.57
ATG4A-206ENST00000457035 ADAMTS4O75173 837 aa11.49□□□□□ -0.57
ATG4A-206ENST00000457035 STAM2O75886 525 aa11.49□□□□□ -0.57
ATG4A-206ENST00000457035 PGK1P00558 417 aa11.49□□□□□ -0.57
ATG4A-206ENST00000457035 TGFB3P10600 412 aa11.49□□□□□ -0.57
ATG4A-206ENST00000457035 XBP1P17861 261 aa11.49□□□□□ -0.57
ATG4A-206ENST00000457035 ITGB5P18084 799 aa11.49□□□□□ -0.57
ATG4A-206ENST00000457035 ICAM3P32942 547 aa11.49□□□□□ -0.57
ATG4A-206ENST00000457035 SREBF1P36956 1147 aa11.49□□□□□ -0.57
ATG4A-206ENST00000457035 GJA9P57773 515 aa11.49□□□□□ -0.57
ATG4A-206ENST00000457035 HMGN5P82970 282 aaKnown RBP11.49□□□□□ -0.57
ATG4A-206ENST00000457035 SEMA3FQ13275 785 aa11.49□□□□□ -0.57
ATG4A-206ENST00000457035 CUL4AQ13619 759 aa11.49□□□□□ -0.57
ATG4A-206ENST00000457035 TTLL4Q14679 1199 aa11.49□□□□□ -0.57
ATG4A-206ENST00000457035 LRRC41Q15345 812 aa11.49□□□□□ -0.57
ATG4A-206ENST00000457035 GJC2Q5T442 439 aaPredicted RBP11.49□□□□□ -0.57
ATG4A-206ENST00000457035 MCTP2Q6DN12 878 aa11.49□□□□□ -0.57
ATG4A-206ENST00000457035 ANKLE1Q8NAG6 615 aa11.49□□□□□ -0.57
ATG4A-206ENST00000457035 ARRDC4Q8NCT1 418 aa11.49□□□□□ -0.57
ATG4A-206ENST00000457035 KLHDC9Q8NEP7 349 aa11.49□□□□□ -0.57
ATG4A-206ENST00000457035 INPP4AQ96PE3 977 aaPredicted RBP11.49□□□□□ -0.57
ATG4A-206ENST00000457035 UPF3AQ9H1J1 476 aaKnown RBP11.49□□□□□ -0.57
ATG4A-206ENST00000457035 XPNPEP3Q9NQH7 507 aa11.49□□□□□ -0.57
ATG4A-206ENST00000457035 BOLA1Q9Y3E2 137 aa11.49□□□□□ -0.57
ATG4A-206ENST00000457035 UBIAD1Q9Y5Z9 338 aa11.49□□□□□ -0.57
ATG4A-206ENST00000457035 CEP290O15078 2479 aa11.49□□□□□ -0.57
ATG4A-206ENST00000457035 SPATA31C2B4DYI2 1134 aa11.48□□□□□ -0.57
ATG4A-206ENST00000457035 NKRFO15226 690 aaKnown RBP eCLIP11.48□□□□□ -0.57
ATG4A-206ENST00000457035 DYNC1LI2O43237 492 aaPredicted RBP11.48□□□□□ -0.57
ATG4A-206ENST00000457035 CYP3A4P08684 503 aa11.48□□□□□ -0.57
ATG4A-206ENST00000457035 TXNP10599 105 aaKnown RBP11.48□□□□□ -0.57
ATG4A-206ENST00000457035 SP2Q02086 613 aa11.48□□□□□ -0.57
ATG4A-206ENST00000457035 LY6KQ17RY6 165 aa11.48□□□□□ -0.57
ATG4A-206ENST00000457035 KRT40Q6A162 431 aa11.48□□□□□ -0.57
ATG4A-206ENST00000457035 CCSAPQ6IQ19 270 aaPredicted RBP11.48□□□□□ -0.57
ATG4A-206ENST00000457035 CYP2W1Q8TAV3 490 aa11.48□□□□□ -0.57
ATG4A-206ENST00000457035 OXER1Q8TDS5 423 aa11.48□□□□□ -0.57
ATG4A-206ENST00000457035 COPS5Q92905 334 aa11.48□□□□□ -0.57
ATG4A-206ENST00000457035 EHMT1Q9H9B1 1298 aa11.48□□□□□ -0.57
ATG4A-206ENST00000457035 KAT6AQ92794 2004 aa11.47□□□□□ -0.57
ATG4A-206ENST00000457035 WDR81Q562E7 1941 aa11.47□□□□□ -0.57
ATG4A-206ENST00000457035 SYNRGQ9UMZ2 1314 aa11.47□□□□□ -0.57
ATG4A-206ENST00000457035 MYADML2A6NDP7 307 aa11.47□□□□□ -0.57
ATG4A-206ENST00000457035 MEIS1O00470 390 aa11.47□□□□□ -0.57
ATG4A-206ENST00000457035 FARP2O94887 1054 aaPredicted RBP11.47□□□□□ -0.57
ATG4A-206ENST00000457035 MMP1P03956 469 aa11.47□□□□□ -0.57
ATG4A-206ENST00000457035 CST5P28325 142 aaPredicted RBP11.47□□□□□ -0.57
ATG4A-206ENST00000457035 ARHGAP4P98171 946 aa11.47□□□□□ -0.57
ATG4A-206ENST00000457035 KCNV1Q6PIU1 500 aa11.47□□□□□ -0.57
ATG4A-206ENST00000457035 TLK2Q86UE8 772 aa11.47□□□□□ -0.57
ATG4A-206ENST00000457035 FBXO18Q8NFZ0 1043 aa11.47□□□□□ -0.57
ATG4A-206ENST00000457035 DIS3LQ8TF46 1054 aaKnown RBP11.47□□□□□ -0.57
ATG4A-206ENST00000457035 TNFRSF25Q93038 417 aa11.47□□□□□ -0.57
ATG4A-206ENST00000457035 PAWRQ96IZ0 340 aaKnown RBP11.47□□□□□ -0.57
ATG4A-206ENST00000457035 MXRA8Q9BRK3 442 aa11.47□□□□□ -0.57
ATG4A-206ENST00000457035 HTATIP2Q9BUP3 242 aa11.47□□□□□ -0.57
ATG4A-206ENST00000457035 BCAS3Q9H6U6 928 aa11.47□□□□□ -0.57
ATG4A-206ENST00000457035 JADE2Q9NQC1 790 aa11.47□□□□□ -0.57
ATG4A-206ENST00000457035 MRVI1Q9Y6F6 885 aa11.47□□□□□ -0.57
ATG4A-206ENST00000457035 BTBD18B2RXH4 712 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 FAM86B1E9PN63 330 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 K7ELQ4 463 aaPredicted RBP11.46□□□□□ -0.57
ATG4A-206ENST00000457035 DNM1LO00429 736 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 MAFGO15525 162 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 ATP9AO75110 1047 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 FAM86B2P0C5J1 330 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 C6orf222P0C671 652 aaPredicted RBP11.46□□□□□ -0.57
ATG4A-206ENST00000457035 COL6A1P12109 1028 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 GJB2P29033 226 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 CIITAP33076 1130 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 USP11P51784 963 aa11.46□□□□□ -0.57
ATG4A-206ENST00000457035 FOSBP53539 338 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms