RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 ACVR2BQ13705 512 aa12.19□□□□□ -0.46
SYPL1-202ENST00000455385 NIPA1Q7RTP0 329 aa12.19□□□□□ -0.46
SYPL1-202ENST00000455385 TRPV1Q8NER1 839 aa12.19□□□□□ -0.46
SYPL1-202ENST00000455385 ZNF396Q96N95 335 aaPredicted RBP12.19□□□□□ -0.46
SYPL1-202ENST00000455385 MPHOSPH6Q99547 160 aaKnown RBP12.19□□□□□ -0.46
SYPL1-202ENST00000455385 ARIH2O95376 493 aa12.18□□□□□ -0.46
SYPL1-202ENST00000455385 ZNF865P0CJ78 1059 aaPredicted RBP12.18□□□□□ -0.46
SYPL1-202ENST00000455385 PTGS1P23219 599 aa12.18□□□□□ -0.46
SYPL1-202ENST00000455385 MTMR1Q13613 665 aa12.18□□□□□ -0.46
SYPL1-202ENST00000455385 ETNPPLQ8TBG4 499 aa12.18□□□□□ -0.46
SYPL1-202ENST00000455385 PXYLP1Q8TE99 480 aa12.18□□□□□ -0.46
SYPL1-202ENST00000455385 GPRASP2Q96D09 838 aa12.18□□□□□ -0.46
SYPL1-202ENST00000455385 MTMR9Q96QG7 549 aa12.18□□□□□ -0.46
SYPL1-202ENST00000455385 ABHD16BQ9H3Z7 469 aa12.18□□□□□ -0.46
SYPL1-202ENST00000455385 KCNMB3Q9NPA1 279 aa12.18□□□□□ -0.46
SYPL1-202ENST00000455385 POLR3EQ9NVU0 708 aa12.18□□□□□ -0.46
SYPL1-202ENST00000455385 CNPY2Q9Y2B0 182 aa12.18□□□□□ -0.46
SYPL1-202ENST00000455385 ATP6V1DQ9Y5K8 247 aa12.18□□□□□ -0.46
SYPL1-202ENST00000455385 ICAM3P32942 547 aa12.18□□□□□ -0.46
SYPL1-202ENST00000455385 NASPP49321 788 aaPredicted RBP12.18□□□□□ -0.46
SYPL1-202ENST00000455385 CACNB2Q08289 660 aaPredicted RBP12.18□□□□□ -0.46
SYPL1-202ENST00000455385 SLC39A14Q15043 492 aa12.18□□□□□ -0.46
SYPL1-202ENST00000455385 IL17AQ16552 155 aa12.18□□□□□ -0.46
SYPL1-202ENST00000455385 CCDC62Q6P9F0 684 aa12.18□□□□□ -0.46
SYPL1-202ENST00000455385 LINC00301Q8NCQ3 95 aa12.18□□□□□ -0.46
SYPL1-202ENST00000455385 NAP1L4Q99733 375 aaKnown RBP12.18□□□□□ -0.46
SYPL1-202ENST00000455385 AGO4Q9HCK5 861 aaKnown RBP12.18□□□□□ -0.46
SYPL1-202ENST00000455385 VTA1Q9NP79 307 aa12.18□□□□□ -0.46
SYPL1-202ENST00000455385 PKD2L1Q9P0L9 805 aa12.18□□□□□ -0.46
SYPL1-202ENST00000455385 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.17□□□□□ -0.46
SYPL1-202ENST00000455385 RBM47A0AV96 593 aaKnown RBP12.17□□□□□ -0.46
SYPL1-202ENST00000455385 DHX15O43143 795 aaKnown RBP12.17□□□□□ -0.46
SYPL1-202ENST00000455385 ADCY6O43306 1168 aa12.17□□□□□ -0.46
SYPL1-202ENST00000455385 NEMFO60524 1076 aa12.17□□□□□ -0.46
SYPL1-202ENST00000455385 ADCYAP1R1P41586 468 aa12.17□□□□□ -0.46
SYPL1-202ENST00000455385 ATP2C1P98194 919 aaPredicted RBP12.17□□□□□ -0.46
SYPL1-202ENST00000455385 ITGB3BPQ13352 177 aaPredicted RBP12.17□□□□□ -0.46
SYPL1-202ENST00000455385 MFSD14CQ5VZR4 134 aa12.17□□□□□ -0.46
SYPL1-202ENST00000455385 ATL3Q6DD88 541 aa12.17□□□□□ -0.46
SYPL1-202ENST00000455385 NLRX1Q86UT6 975 aa12.17□□□□□ -0.46
SYPL1-202ENST00000455385 TRMT44Q8IYL2 757 aaKnown RBP12.17□□□□□ -0.46
SYPL1-202ENST00000455385 GDPD2Q9HCC8 539 aa12.17□□□□□ -0.46
SYPL1-202ENST00000455385 DDX41Q9UJV9 622 aaKnown RBP12.17□□□□□ -0.46
SYPL1-202ENST00000455385 RCOR1Q9UKL0 485 aa12.17□□□□□ -0.46
SYPL1-202ENST00000455385 ZHX1Q9UKY1 873 aaPredicted RBP12.17□□□□□ -0.46
SYPL1-202ENST00000455385 MAFGO15525 162 aa12.16□□□□□ -0.46
SYPL1-202ENST00000455385 FIBPO43427 364 aa12.16□□□□□ -0.46
SYPL1-202ENST00000455385 CYBAP13498 195 aa12.16□□□□□ -0.46
SYPL1-202ENST00000455385 KCNA2P16389 499 aa12.16□□□□□ -0.46
SYPL1-202ENST00000455385 NCLP19338 710 aaKnown RBP12.16□□□□□ -0.46
SYPL1-202ENST00000455385 MARCKSP29966 332 aaPredicted RBP12.16□□□□□ -0.46
SYPL1-202ENST00000455385 GRK4P32298 578 aa12.16□□□□□ -0.46
SYPL1-202ENST00000455385 KRT85P78386 507 aa12.16□□□□□ -0.46
SYPL1-202ENST00000455385 ORC2Q13416 577 aaPredicted RBP12.16□□□□□ -0.46
SYPL1-202ENST00000455385 CALCRLQ16602 461 aa12.16□□□□□ -0.46
SYPL1-202ENST00000455385 LY6KQ17RY6 165 aa12.16□□□□□ -0.46
SYPL1-202ENST00000455385 CCDC144BQ3MJ40 725 aa12.16□□□□□ -0.46
SYPL1-202ENST00000455385 GNPTABQ3T906 1256 aa12.16□□□□□ -0.46
SYPL1-202ENST00000455385 GJC2Q5T442 439 aaPredicted RBP12.16□□□□□ -0.46
SYPL1-202ENST00000455385 CTU1Q7Z7A3 348 aaKnown RBP12.16□□□□□ -0.46
SYPL1-202ENST00000455385 SLC5A5Q92911 643 aa12.16□□□□□ -0.46
SYPL1-202ENST00000455385 ZNF577Q9BSK1 485 aa12.16□□□□□ -0.46
SYPL1-202ENST00000455385 CFAP45Q9UL16 551 aa12.16□□□□□ -0.46
SYPL1-202ENST00000455385 TELO2Q9Y4R8 837 aa12.16□□□□□ -0.46
SYPL1-202ENST00000455385 POTEFA5A3E0 1075 aa12.16□□□□□ -0.46
SYPL1-202ENST00000455385 IPO5O00410 1097 aaKnown RBP12.16□□□□□ -0.46
SYPL1-202ENST00000455385 BAG4O95429 457 aaKnown RBP12.16□□□□□ -0.46
SYPL1-202ENST00000455385 HMGCRP04035 888 aa12.16□□□□□ -0.46
SYPL1-202ENST00000455385 SETQ01105 290 aaPredicted RBP12.16□□□□□ -0.46
SYPL1-202ENST00000455385 MAP3K21Q5TCX8 1036 aa12.16□□□□□ -0.46
SYPL1-202ENST00000455385 SH3TC2Q8TF17 1288 aa12.16□□□□□ -0.46
SYPL1-202ENST00000455385 LEO1Q8WVC0 666 aaPredicted RBP12.16□□□□□ -0.46
SYPL1-202ENST00000455385 COPS5Q92905 334 aa12.16□□□□□ -0.46
SYPL1-202ENST00000455385 TBX3O15119 743 aa12.15□□□□□ -0.46
SYPL1-202ENST00000455385 SORBS3O60504 671 aa12.15□□□□□ -0.46
SYPL1-202ENST00000455385 OR52Z1P0C646 297 aa12.15□□□□□ -0.46
SYPL1-202ENST00000455385 TXNP10599 105 aaKnown RBP12.15□□□□□ -0.46
SYPL1-202ENST00000455385 TGFB3P10600 412 aa12.15□□□□□ -0.46
SYPL1-202ENST00000455385 PRKAR2AP13861 404 aaKnown RBP12.15□□□□□ -0.46
SYPL1-202ENST00000455385 SMPD1P17405 629 aa12.15□□□□□ -0.46
SYPL1-202ENST00000455385 CCND3P30281 292 aaPredicted RBP12.15□□□□□ -0.46
SYPL1-202ENST00000455385 TXKP42681 527 aa12.15□□□□□ -0.46
SYPL1-202ENST00000455385 GRIN1Q05586 938 aa12.15□□□□□ -0.46
SYPL1-202ENST00000455385 CLEC17AQ6ZS10 378 aa12.15□□□□□ -0.46
SYPL1-202ENST00000455385 SLAIN1Q8ND83 568 aa12.15□□□□□ -0.46
SYPL1-202ENST00000455385 SCFD2Q8WU76 684 aa12.15□□□□□ -0.46
SYPL1-202ENST00000455385 FAM20AQ96MK3 541 aa12.15□□□□□ -0.46
SYPL1-202ENST00000455385 DOCK5Q9H7D0 1870 aa12.15□□□□□ -0.46
SYPL1-202ENST00000455385 SPTLC2O15270 562 aa12.15□□□□□ -0.47
SYPL1-202ENST00000455385 PSMD10O75832 226 aa12.15□□□□□ -0.47
SYPL1-202ENST00000455385 YEATS4O95619 227 aa12.15□□□□□ -0.47
SYPL1-202ENST00000455385 INHAP05111 366 aa12.15□□□□□ -0.47
SYPL1-202ENST00000455385 UBA1P22314 1058 aaKnown RBP12.15□□□□□ -0.47
SYPL1-202ENST00000455385 STK38Q15208 465 aa12.15□□□□□ -0.47
SYPL1-202ENST00000455385 IQSEC1Q6DN90 963 aa12.15□□□□□ -0.47
SYPL1-202ENST00000455385 CDHR1Q96JP9 859 aa12.15□□□□□ -0.47
SYPL1-202ENST00000455385 SENP7Q9BQF6 1050 aa12.15□□□□□ -0.47
SYPL1-202ENST00000455385 FBXO2Q9UK22 296 aaPredicted RBP12.15□□□□□ -0.47
SYPL1-202ENST00000455385 CEP131Q9UPN4 1083 aa12.15□□□□□ -0.47
SYPL1-202ENST00000455385 DDX39AO00148 427 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms