RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 IKBKEQ14164 716 aa21.77■■□□□ 1.08
MSH6-206ENST00000455383 HIC1Q14526 733 aa21.77■■□□□ 1.08
MSH6-206ENST00000455383 MYSM1Q5VVJ2 828 aa21.77■■□□□ 1.08
MSH6-206ENST00000455383 STOX1Q6ZVD7 989 aa21.77■■□□□ 1.08
MSH6-206ENST00000455383 PLEKHM2Q8IWE5 1019 aa21.77■■□□□ 1.08
MSH6-206ENST00000455383 DHX37Q8IY37 1157 aaKnown RBP21.77■■□□□ 1.08
MSH6-206ENST00000455383 FAM122AQ96E09 287 aa21.77■■□□□ 1.08
MSH6-206ENST00000455383 LRFN3Q9BTN0 628 aa21.77■■□□□ 1.08
MSH6-206ENST00000455383 AMNQ9BXJ7 453 aa21.77■■□□□ 1.08
MSH6-206ENST00000455383 VAT1LQ9HCJ6 419 aa21.77■■□□□ 1.08
MSH6-206ENST00000455383 PPP1R11O60927 126 aaPredicted RBP21.76■■□□□ 1.07
MSH6-206ENST00000455383 CFBP00751 764 aa21.76■■□□□ 1.07
MSH6-206ENST00000455383 ZNF200P98182 395 aaPredicted RBP21.76■■□□□ 1.07
MSH6-206ENST00000455383 KCNV1Q6PIU1 500 aa21.76■■□□□ 1.07
MSH6-206ENST00000455383 CWC27Q6UX04 472 aaKnown RBP21.76■■□□□ 1.07
MSH6-206ENST00000455383 STAG2Q8N3U4 1231 aa21.76■■□□□ 1.07
MSH6-206ENST00000455383 SAMD3Q8N6K7 520 aa21.76■■□□□ 1.07
MSH6-206ENST00000455383 MYH6P13533 1939 aa21.76■■□□□ 1.07
MSH6-206ENST00000455383 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.75■■□□□ 1.07
MSH6-206ENST00000455383 DHX16O60231 1041 aaKnown RBP21.75■■□□□ 1.07
MSH6-206ENST00000455383 LGR5O75473 907 aa21.75■■□□□ 1.07
MSH6-206ENST00000455383 HSDL1Q3SXM5 330 aa21.75■■□□□ 1.07
MSH6-206ENST00000455383 CELF3Q5SZQ8 465 aaKnown RBP21.75■■□□□ 1.07
MSH6-206ENST00000455383 SERINC5Q86VE9 423 aa21.75■■□□□ 1.07
MSH6-206ENST00000455383 VSIG10LQ86VR7 867 aa21.75■■□□□ 1.07
MSH6-206ENST00000455383 KHSRPQ92945 711 aaKnown RBP eCLIP21.75■■□□□ 1.07
MSH6-206ENST00000455383 KRT23Q9C075 422 aa21.75■■□□□ 1.07
MSH6-206ENST00000455383 SIP14410 1827 aa21.75■■□□□ 1.07
MSH6-206ENST00000455383 BRWD1Q9NSI6 2320 aa21.74■■□□□ 1.07
MSH6-206ENST00000455383 RBAK-RBAKDNI3L0D1 243 aa21.74■■□□□ 1.07
MSH6-206ENST00000455383 HOXC8P31273 242 aa21.74■■□□□ 1.07
MSH6-206ENST00000455383 SEC23AQ15436 765 aa21.74■■□□□ 1.07
MSH6-206ENST00000455383 IMMTQ16891 758 aaKnown RBP21.74■■□□□ 1.07
MSH6-206ENST00000455383 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.74■■□□□ 1.07
MSH6-206ENST00000455383 C16orf70Q9BSU1 422 aa21.74■■□□□ 1.07
MSH6-206ENST00000455383 MYH7BA7E2Y1 1941 aa21.74■■□□□ 1.07
MSH6-206ENST00000455383 ZBTB5O15062 677 aa21.73■■□□□ 1.07
MSH6-206ENST00000455383 TGFB3P10600 412 aa21.73■■□□□ 1.07
MSH6-206ENST00000455383 HTRA4P83105 476 aaPredicted RBP21.73■■□□□ 1.07
MSH6-206ENST00000455383 SP2Q02086 613 aa21.73■■□□□ 1.07
MSH6-206ENST00000455383 AAMPQ13685 434 aa21.73■■□□□ 1.07
MSH6-206ENST00000455383 PGM5Q15124 567 aa21.73■■□□□ 1.07
MSH6-206ENST00000455383 CHD1LQ86WJ1 897 aa21.73■■□□□ 1.07
MSH6-206ENST00000455383 SP7Q8TDD2 431 aaPredicted RBP21.73■■□□□ 1.07
MSH6-206ENST00000455383 SPATA33Q96N06 139 aa21.73■■□□□ 1.07
MSH6-206ENST00000455383 UBE2ZQ9H832 354 aaPredicted RBP21.73■■□□□ 1.07
MSH6-206ENST00000455383 CD320Q9NPF0 282 aa21.73■■□□□ 1.07
MSH6-206ENST00000455383 DIAPH3Q9NSV4 1193 aa21.73■■□□□ 1.07
MSH6-206ENST00000455383 CTNNA3Q9UI47 895 aa21.73■■□□□ 1.07
MSH6-206ENST00000455383 MTUS1Q9ULD2 1270 aa21.73■■□□□ 1.07
MSH6-206ENST00000455383 EMSYQ7Z589 1322 aa21.73■■□□□ 1.07
MSH6-206ENST00000455383 PALM3A6NDB9 673 aaPredicted RBP21.72■■□□□ 1.07
MSH6-206ENST00000455383 KLRF2D3W0D1 207 aa21.72■■□□□ 1.07
MSH6-206ENST00000455383 HIP1O00291 1037 aa21.72■■□□□ 1.07
MSH6-206ENST00000455383 GGPS1O95749 300 aa21.72■■□□□ 1.07
MSH6-206ENST00000455383 NUCB1Q02818 461 aa21.72■■□□□ 1.07
MSH6-206ENST00000455383 PLEKHG4Q58EX7 1191 aa21.72■■□□□ 1.07
MSH6-206ENST00000455383 TMEM31Q5JXX7 168 aa21.72■■□□□ 1.07
MSH6-206ENST00000455383 IFIT1BQ5T764 474 aaKnown RBP21.72■■□□□ 1.07
MSH6-206ENST00000455383 DBF4BQ8NFT6 615 aa21.72■■□□□ 1.07
MSH6-206ENST00000455383 IL31RAQ8NI17 732 aa21.72■■□□□ 1.07
MSH6-206ENST00000455383 UBAC1Q9BSL1 405 aa21.72■■□□□ 1.07
MSH6-206ENST00000455383 CNNM2Q9H8M5 875 aa21.72■■□□□ 1.07
MSH6-206ENST00000455383 C11orf16Q9NQ32 467 aa21.72■■□□□ 1.07
MSH6-206ENST00000455383 MAD2L2Q9UI95 211 aa21.72■■□□□ 1.07
MSH6-206ENST00000455383 INSL6Q9Y581 213 aa21.72■■□□□ 1.07
MSH6-206ENST00000455383 RSPH10B2B2RC85 870 aa21.71■■□□□ 1.07
MSH6-206ENST00000455383 GPR37L1O60883 481 aa21.71■■□□□ 1.07
MSH6-206ENST00000455383 RSPH10BP0C881 870 aa21.71■■□□□ 1.07
MSH6-206ENST00000455383 MYCLP12524 364 aaPredicted RBP21.71■■□□□ 1.07
MSH6-206ENST00000455383 UBA1P22314 1058 aaKnown RBP21.71■■□□□ 1.07
MSH6-206ENST00000455383 SLC35G1Q2M3R5 365 aa21.71■■□□□ 1.07
MSH6-206ENST00000455383 LEXMQ3ZCV2 418 aa21.71■■□□□ 1.07
MSH6-206ENST00000455383 B4GALNT3Q6L9W6 998 aa21.71■■□□□ 1.07
MSH6-206ENST00000455383 FAM117BQ6P1L5 589 aa21.71■■□□□ 1.07
MSH6-206ENST00000455383 PCDHA1Q9Y5I3 950 aa21.71■■□□□ 1.07
MSH6-206ENST00000455383 PI4K2BG5E9Z4 385 aa21.7■■□□□ 1.06
MSH6-206ENST00000455383 AMHP03971 560 aa21.7■■□□□ 1.06
MSH6-206ENST00000455383 HOXA13P31271 388 aaPredicted RBP21.7■■□□□ 1.06
MSH6-206ENST00000455383 HOXD11P31277 338 aaPredicted RBP21.7■■□□□ 1.06
MSH6-206ENST00000455383 C17orf80Q9BSJ5 609 aa21.7■■□□□ 1.06
MSH6-206ENST00000455383 RWDD1Q9H446 243 aaPredicted RBP21.7■■□□□ 1.06
MSH6-206ENST00000455383 MICAL3Q7RTP6 2002 aa21.7■■□□□ 1.06
MSH6-206ENST00000455383 THPOP40225 353 aa21.69■■□□□ 1.06
MSH6-206ENST00000455383 CYB5R4Q7L1T6 521 aa21.69■■□□□ 1.06
MSH6-206ENST00000455383 FBXO22Q8NEZ5 403 aa21.69■■□□□ 1.06
MSH6-206ENST00000455383 GPKOWQ92917 476 aaPredicted RBP eCLIP21.69■■□□□ 1.061e-10■■□□□ 11.7
MSH6-206ENST00000455383 RIOX1Q9H6W3 641 aa21.69■■□□□ 1.06
MSH6-206ENST00000455383 C17orf102A2RUQ5 167 aa21.68■■□□□ 1.06
MSH6-206ENST00000455383 H3BRB1 525 aa21.68■■□□□ 1.06
MSH6-206ENST00000455383 SORBS3O60504 671 aa21.68■■□□□ 1.06
MSH6-206ENST00000455383 CAND2O75155 1236 aa21.68■■□□□ 1.06
MSH6-206ENST00000455383 IGHDP01880 384 aa21.68■■□□□ 1.06
MSH6-206ENST00000455383 CCND2P30279 289 aa21.68■■□□□ 1.06
MSH6-206ENST00000455383 FAM178BQ8IXR5 827 aa21.68■■□□□ 1.06
MSH6-206ENST00000455383 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.68■■□□□ 1.06
MSH6-206ENST00000455383 IL25Q9H293 177 aa21.68■■□□□ 1.06
MSH6-206ENST00000455383 TUT1Q9H6E5 874 aaKnown RBP21.68■■□□□ 1.06
MSH6-206ENST00000455383 MLXIPQ9HAP2 919 aa21.68■■□□□ 1.06
MSH6-206ENST00000455383 HCN4Q9Y3Q4 1203 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 197.1 ms