RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 RBM19Q9Y4C8 960 aaKnown RBP16.25■□□□□ 0.19
HMGXB4-204ENST00000455359 DDX49Q9Y6V7 483 aaKnown RBP16.25■□□□□ 0.19
HMGXB4-204ENST00000455359 RBBP6Q7Z6E9 1792 aaKnown RBP16.25■□□□□ 0.19
HMGXB4-204ENST00000455359 IGLV3-22A0A075B6J6 115 aa16.24■□□□□ 0.19
HMGXB4-204ENST00000455359 VPS37CA5D8V6 355 aaPredicted RBP16.24■□□□□ 0.19
HMGXB4-204ENST00000455359 SMPD1P17405 629 aa16.24■□□□□ 0.19
HMGXB4-204ENST00000455359 LETM2Q2VYF4 491 aa16.24■□□□□ 0.19
HMGXB4-204ENST00000455359 EARS2Q5JPH6 523 aaKnown RBP16.24■□□□□ 0.19
HMGXB4-204ENST00000455359 LHX8Q68G74 356 aa16.24■□□□□ 0.19
HMGXB4-204ENST00000455359 PLA2G4DQ86XP0 818 aa16.24■□□□□ 0.19
HMGXB4-204ENST00000455359 KCNH7Q9NS40 1196 aa16.24■□□□□ 0.19
HMGXB4-204ENST00000455359 KIF28PB7ZC32 967 aa16.23■□□□□ 0.19
HMGXB4-204ENST00000455359 TBX3O15119 743 aa16.23■□□□□ 0.19
HMGXB4-204ENST00000455359 EDIL3O43854 480 aa16.23■□□□□ 0.19
HMGXB4-204ENST00000455359 GH1P01241 217 aa16.23■□□□□ 0.19
HMGXB4-204ENST00000455359 GJA9P57773 515 aa16.23■□□□□ 0.19
HMGXB4-204ENST00000455359 SEMA3FQ13275 785 aa16.23■□□□□ 0.19
HMGXB4-204ENST00000455359 LAMC2Q13753 1193 aa16.23■□□□□ 0.19
HMGXB4-204ENST00000455359 PRR16Q569H4 304 aa16.23■□□□□ 0.19
HMGXB4-204ENST00000455359 BRDTQ58F21 947 aaPredicted RBP16.23■□□□□ 0.19
HMGXB4-204ENST00000455359 ARRDC4Q8NCT1 418 aa16.23■□□□□ 0.19
HMGXB4-204ENST00000455359 CYP2W1Q8TAV3 490 aa16.23■□□□□ 0.19
HMGXB4-204ENST00000455359 ABHD8Q96I13 439 aa16.23■□□□□ 0.19
HMGXB4-204ENST00000455359 DEFB118Q96PH6 123 aa16.23■□□□□ 0.19
HMGXB4-204ENST00000455359 CRISPLD2Q9H0B8 497 aa16.23■□□□□ 0.19
HMGXB4-204ENST00000455359 AP5M1Q9H0R1 490 aa16.23■□□□□ 0.19
HMGXB4-204ENST00000455359 UPF3AQ9H1J1 476 aaKnown RBP16.23■□□□□ 0.19
HMGXB4-204ENST00000455359 AGO4Q9HCK5 861 aaKnown RBP16.23■□□□□ 0.19
HMGXB4-204ENST00000455359 TBC1D22BQ9NU19 505 aa16.23■□□□□ 0.19
HMGXB4-204ENST00000455359 DDX25Q9UHL0 483 aaKnown RBP16.23■□□□□ 0.19
HMGXB4-204ENST00000455359 ZNFX1Q9P2E3 1918 aaKnown RBP16.23■□□□□ 0.19
HMGXB4-204ENST00000455359 CCNT1O60563 726 aaKnown RBP16.22■□□□□ 0.19
HMGXB4-204ENST00000455359 SGPL1O95470 568 aa16.22■□□□□ 0.19
HMGXB4-204ENST00000455359 UBA1P22314 1058 aaKnown RBP16.22■□□□□ 0.19
HMGXB4-204ENST00000455359 GJA8P48165 433 aa16.22■□□□□ 0.19
HMGXB4-204ENST00000455359 CELF3Q5SZQ8 465 aaKnown RBP16.22■□□□□ 0.19
HMGXB4-204ENST00000455359 METTL7BQ6UX53 244 aa16.22■□□□□ 0.19
HMGXB4-204ENST00000455359 TNS4Q8IZW8 715 aa16.22■□□□□ 0.19
HMGXB4-204ENST00000455359 SPRYD3Q8NCJ5 442 aa16.22■□□□□ 0.19
HMGXB4-204ENST00000455359 LENG9Q96B70 501 aa16.22■□□□□ 0.19
HMGXB4-204ENST00000455359 RIT2Q99578 217 aa16.22■□□□□ 0.19
HMGXB4-204ENST00000455359 XPNPEP3Q9NQH7 507 aa16.22■□□□□ 0.19
HMGXB4-204ENST00000455359 OGDHLQ9ULD0 1010 aa16.22■□□□□ 0.19
HMGXB4-204ENST00000455359 NFASCO94856 1347 aa16.22■□□□□ 0.19
HMGXB4-204ENST00000455359 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.21■□□□□ 0.19
HMGXB4-204ENST00000455359 FAM205CA6NFA0 338 aa16.21■□□□□ 0.19
HMGXB4-204ENST00000455359 ARIH2O95376 493 aa16.21■□□□□ 0.19
HMGXB4-204ENST00000455359 TDP2O95551 362 aa16.21■□□□□ 0.19
HMGXB4-204ENST00000455359 ZSCAN22P10073 491 aaPredicted RBP16.21■□□□□ 0.19
HMGXB4-204ENST00000455359 ARP10275 920 aa16.21■□□□□ 0.19
HMGXB4-204ENST00000455359 KCNA2P16389 499 aa16.21■□□□□ 0.19
HMGXB4-204ENST00000455359 CST5P28325 142 aaPredicted RBP16.21■□□□□ 0.19
HMGXB4-204ENST00000455359 LY6KQ17RY6 165 aa16.21■□□□□ 0.19
HMGXB4-204ENST00000455359 TTC38Q5R3I4 469 aa16.21■□□□□ 0.19
HMGXB4-204ENST00000455359 MYSM1Q5VVJ2 828 aa16.21■□□□□ 0.19
HMGXB4-204ENST00000455359 RNF180Q86T96 592 aa16.21■□□□□ 0.19
HMGXB4-204ENST00000455359 TLK2Q86UE8 772 aa16.21■□□□□ 0.19
HMGXB4-204ENST00000455359 SLFN12Q8IYM2 578 aa16.21■□□□□ 0.19
HMGXB4-204ENST00000455359 ANKLE1Q8NAG6 615 aa16.21■□□□□ 0.19
HMGXB4-204ENST00000455359 U2AF1L4Q8WU68 220 aaKnown RBP16.21■□□□□ 0.19
HMGXB4-204ENST00000455359 ZFP91Q96JP5 570 aaPredicted RBP16.21■□□□□ 0.19
HMGXB4-204ENST00000455359 FAM20AQ96MK3 541 aa16.21■□□□□ 0.19
HMGXB4-204ENST00000455359 LCTP09848 1927 aa16.21■□□□□ 0.19
HMGXB4-204ENST00000455359 PLXNA1Q9UIW2 1896 aa16.21■□□□□ 0.19
HMGXB4-204ENST00000455359 A6NJR5 290 aa16.2■□□□□ 0.18
HMGXB4-204ENST00000455359 IPO5O00410 1097 aaKnown RBP16.2■□□□□ 0.18
HMGXB4-204ENST00000455359 DYNC1LI2O43237 492 aaPredicted RBP16.2■□□□□ 0.18
HMGXB4-204ENST00000455359 ZEB2O60315 1214 aa16.2■□□□□ 0.18
HMGXB4-204ENST00000455359 KPNA6O60684 536 aa16.2■□□□□ 0.18
HMGXB4-204ENST00000455359 ADAMTS4O75173 837 aa16.2■□□□□ 0.18
HMGXB4-204ENST00000455359 GGPS1O95749 300 aa16.2■□□□□ 0.18
HMGXB4-204ENST00000455359 CPT1AP50416 773 aa16.2■□□□□ 0.18
HMGXB4-204ENST00000455359 SP2Q02086 613 aa16.2■□□□□ 0.18
HMGXB4-204ENST00000455359 RESTQ13127 1097 aa16.2■□□□□ 0.18
HMGXB4-204ENST00000455359 DHX37Q8IY37 1157 aaKnown RBP16.2■□□□□ 0.18
HMGXB4-204ENST00000455359 OR6J1Q8NGC5 347 aa16.2■□□□□ 0.18
HMGXB4-204ENST00000455359 PPTC7Q8NI37 304 aa16.2■□□□□ 0.18
HMGXB4-204ENST00000455359 SDF4Q9BRK5 362 aa16.2■□□□□ 0.18
HMGXB4-204ENST00000455359 ZNF577Q9BSK1 485 aa16.2■□□□□ 0.18
HMGXB4-204ENST00000455359 TSEN34Q9BSV6 310 aaKnown RBP16.2■□□□□ 0.18
HMGXB4-204ENST00000455359 MLXIPQ9HAP2 919 aa16.2■□□□□ 0.18
HMGXB4-204ENST00000455359 KCNMB3Q9NPA1 279 aa16.2■□□□□ 0.18
HMGXB4-204ENST00000455359 LAD1O00515 517 aa16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 MSH4O15457 936 aa16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 ADCY6O43306 1168 aa16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 NEMFO60524 1076 aa16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 ATP9AO75110 1047 aa16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 FARP2O94887 1054 aaPredicted RBP16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 BAG4O95429 457 aaKnown RBP16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 BMP15O95972 392 aa16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 MYCP01106 439 aaPredicted RBP16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 DDIT3P35638 169 aa16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 NUCB2P80303 420 aa16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 ARHGAP1Q07960 439 aa16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 PCSK9Q8NBP7 692 aaKnown RBP16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 KLHDC9Q8NEP7 349 aa16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 ETNPPLQ8TBG4 499 aa16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 SLC5A5Q92911 643 aa16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 JPH1Q9HDC5 661 aaPredicted RBP16.19■□□□□ 0.18
HMGXB4-204ENST00000455359 TCEAL9Q9UHQ7 104 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms