RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 HSD17B4P51659 736 aa16.66■□□□□ 0.26
LYSMD3-202ENST00000453259 HAND2P61296 217 aa16.66■□□□□ 0.26
LYSMD3-202ENST00000453259 MKRN4PQ13434 485 aaPredicted RBP16.66■□□□□ 0.26
LYSMD3-202ENST00000453259 ZNF618Q5T7W0 954 aa16.66■□□□□ 0.26
LYSMD3-202ENST00000453259 SERINC5Q86VE9 423 aa16.66■□□□□ 0.26
LYSMD3-202ENST00000453259 TBC1D10CQ8IV04 446 aa16.66■□□□□ 0.26
LYSMD3-202ENST00000453259 PPP1R13LQ8WUF5 828 aa16.66■□□□□ 0.26
LYSMD3-202ENST00000453259 AMNQ9BXJ7 453 aa16.66■□□□□ 0.26
LYSMD3-202ENST00000453259 KCNH6Q9H252 994 aa16.66■□□□□ 0.26
LYSMD3-202ENST00000453259 BRWD1Q9NSI6 2320 aa16.66■□□□□ 0.26
LYSMD3-202ENST00000453259 COL20A1Q9P218 1284 aa16.66■□□□□ 0.26
LYSMD3-202ENST00000453259 PARP1P09874 1014 aaKnown RBP16.65■□□□□ 0.26
LYSMD3-202ENST00000453259 NMIQ13287 307 aaPredicted RBP16.65■□□□□ 0.26
LYSMD3-202ENST00000453259 QRICH1Q2TAL8 776 aa16.65■□□□□ 0.26
LYSMD3-202ENST00000453259 ANKRD45Q5TZF3 282 aa16.65■□□□□ 0.26
LYSMD3-202ENST00000453259 MYSM1Q5VVJ2 828 aa16.65■□□□□ 0.26
LYSMD3-202ENST00000453259 SPRED2Q7Z698 418 aa16.65■□□□□ 0.26
LYSMD3-202ENST00000453259 ZNF589Q86UQ0 364 aaPredicted RBP16.65■□□□□ 0.26
LYSMD3-202ENST00000453259 ZSCAN10Q96SZ4 725 aaPredicted RBP16.65■□□□□ 0.26
LYSMD3-202ENST00000453259 UBA5Q9GZZ9 404 aa16.65■□□□□ 0.26
LYSMD3-202ENST00000453259 PRKAG3Q9UGI9 489 aa16.65■□□□□ 0.26
LYSMD3-202ENST00000453259 MTUS1Q9ULD2 1270 aa16.65■□□□□ 0.26
LYSMD3-202ENST00000453259 LAMA4Q16363 1823 aa16.65■□□□□ 0.26
LYSMD3-202ENST00000453259 NEDD4P46934 1319 aa16.65■□□□□ 0.26
LYSMD3-202ENST00000453259 RSPH10B2B2RC85 870 aa16.64■□□□□ 0.25
LYSMD3-202ENST00000453259 NCK2O43639 380 aa16.64■□□□□ 0.25
LYSMD3-202ENST00000453259 RSPH10BP0C881 870 aa16.64■□□□□ 0.25
LYSMD3-202ENST00000453259 ZNF286BP0CG31 522 aa16.64■□□□□ 0.25
LYSMD3-202ENST00000453259 EIF2AK2P19525 551 aaKnown RBP16.64■□□□□ 0.25
LYSMD3-202ENST00000453259 KCNA5P22460 613 aa16.64■□□□□ 0.25
LYSMD3-202ENST00000453259 HOXC8P31273 242 aa16.64■□□□□ 0.25
LYSMD3-202ENST00000453259 HDAC1Q13547 482 aaPredicted RBP16.64■□□□□ 0.25
LYSMD3-202ENST00000453259 MBTPS1Q14703 1052 aa16.64■□□□□ 0.25
LYSMD3-202ENST00000453259 COL19A1Q14993 1142 aa16.64■□□□□ 0.25
LYSMD3-202ENST00000453259 PLEKHG4Q58EX7 1191 aa16.64■□□□□ 0.25
LYSMD3-202ENST00000453259 CELF3Q5SZQ8 465 aaKnown RBP16.64■□□□□ 0.25
LYSMD3-202ENST00000453259 PTCRAQ6ISU1 281 aaPredicted RBP16.64■□□□□ 0.25
LYSMD3-202ENST00000453259 STOX1Q6ZVD7 989 aa16.64■□□□□ 0.25
LYSMD3-202ENST00000453259 NEK9Q8TD19 979 aa16.64■□□□□ 0.25
LYSMD3-202ENST00000453259 ALG1Q9BT22 464 aa16.64■□□□□ 0.25
LYSMD3-202ENST00000453259 GRXCR2A6NFK2 248 aa16.63■□□□□ 0.25
LYSMD3-202ENST00000453259 DHX16O60231 1041 aaKnown RBP16.63■□□□□ 0.25
LYSMD3-202ENST00000453259 TMCO2Q7Z6W1 182 aaPredicted RBP16.63■□□□□ 0.25
LYSMD3-202ENST00000453259 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.63■□□□□ 0.25
LYSMD3-202ENST00000453259 SEPT8Q92599 483 aa16.63■□□□□ 0.25
LYSMD3-202ENST00000453259 TBC1D5Q92609 795 aa16.63■□□□□ 0.25
LYSMD3-202ENST00000453259 APBB2Q92870 758 aa16.63■□□□□ 0.25
LYSMD3-202ENST00000453259 KHSRPQ92945 711 aaKnown RBP eCLIP16.63■□□□□ 0.25
LYSMD3-202ENST00000453259 SPATA33Q96N06 139 aa16.63■□□□□ 0.25
LYSMD3-202ENST00000453259 PDCD2LQ9BRP1 358 aa16.63■□□□□ 0.25
LYSMD3-202ENST00000453259 CNNM2Q9H8M5 875 aa16.63■□□□□ 0.25
LYSMD3-202ENST00000453259 JMJD4Q9H9V9 463 aa16.63■□□□□ 0.25
LYSMD3-202ENST00000453259 H3BNC9 293 aa16.62■□□□□ 0.25
LYSMD3-202ENST00000453259 HIP1O00291 1037 aa16.62■□□□□ 0.25
LYSMD3-202ENST00000453259 KDM4AO75164 1064 aa16.62■□□□□ 0.25
LYSMD3-202ENST00000453259 STAM2O75886 525 aa16.62■□□□□ 0.25
LYSMD3-202ENST00000453259 CFBP00751 764 aa16.62■□□□□ 0.25
LYSMD3-202ENST00000453259 GNAT1P11488 350 aa16.62■□□□□ 0.25
LYSMD3-202ENST00000453259 THPOP40225 353 aa16.62■□□□□ 0.25
LYSMD3-202ENST00000453259 AAMPQ13685 434 aa16.62■□□□□ 0.25
LYSMD3-202ENST00000453259 TCTN1Q2MV58 587 aa16.62■□□□□ 0.25
LYSMD3-202ENST00000453259 VSIG10LQ86VR7 867 aa16.62■□□□□ 0.25
LYSMD3-202ENST00000453259 ENAHQ8N8S7 591 aaPredicted RBP16.62■□□□□ 0.25
LYSMD3-202ENST00000453259 DBF4BQ8NFT6 615 aa16.62■□□□□ 0.25
LYSMD3-202ENST00000453259 PABPC5Q96DU9 382 aaKnown RBP16.62■□□□□ 0.25
LYSMD3-202ENST00000453259 ZKSCAN3Q9BRR0 538 aa16.62■□□□□ 0.25
LYSMD3-202ENST00000453259 KRT23Q9C075 422 aa16.62■□□□□ 0.25
LYSMD3-202ENST00000453259 CPVLQ9H3G5 476 aa16.62■□□□□ 0.25
LYSMD3-202ENST00000453259 CD320Q9NPF0 282 aa16.62■□□□□ 0.25
LYSMD3-202ENST00000453259 MICAL3Q7RTP6 2002 aa16.62■□□□□ 0.25
LYSMD3-202ENST00000453259 MYH6P13533 1939 aa16.61■□□□□ 0.25
LYSMD3-202ENST00000453259 C17orf102A2RUQ5 167 aa16.61■□□□□ 0.25
LYSMD3-202ENST00000453259 TRIM6-TRIM34B2RNG4 842 aa16.61■□□□□ 0.25
LYSMD3-202ENST00000453259 SSTR3P32745 418 aaPredicted RBP16.61■□□□□ 0.25
LYSMD3-202ENST00000453259 CSPP1Q1MSJ5 1256 aa16.61■□□□□ 0.25
LYSMD3-202ENST00000453259 HSDL1Q3SXM5 330 aa16.61■□□□□ 0.25
LYSMD3-202ENST00000453259 EPC2Q52LR7 807 aa16.61■□□□□ 0.25
LYSMD3-202ENST00000453259 MYOCDQ8IZQ8 938 aa16.61■□□□□ 0.25
LYSMD3-202ENST00000453259 BANK1Q8NDB2 785 aa16.61■□□□□ 0.25
LYSMD3-202ENST00000453259 TOP1MTQ969P6 601 aa16.61■□□□□ 0.25
LYSMD3-202ENST00000453259 MTMR8Q96EF0 704 aa16.61■□□□□ 0.25
LYSMD3-202ENST00000453259 YME1L1Q96TA2 773 aa16.61■□□□□ 0.25
LYSMD3-202ENST00000453259 C17orf80Q9BSJ5 609 aa16.61■□□□□ 0.25
LYSMD3-202ENST00000453259 UBAC1Q9BSL1 405 aa16.61■□□□□ 0.25
LYSMD3-202ENST00000453259 C16orf70Q9BSU1 422 aa16.61■□□□□ 0.25
LYSMD3-202ENST00000453259 USP26Q9BXU7 913 aa16.61■□□□□ 0.25
LYSMD3-202ENST00000453259 RWDD3Q9Y3V2 267 aa16.61■□□□□ 0.25
LYSMD3-202ENST00000453259 MUC6Q6W4X9 2439 aa16.6■□□□□ 0.25
LYSMD3-202ENST00000453259 H3BRB1 525 aa16.6■□□□□ 0.25
LYSMD3-202ENST00000453259 OPLAHO14841 1288 aa16.6■□□□□ 0.25
LYSMD3-202ENST00000453259 ZBTB5O15062 677 aa16.6■□□□□ 0.25
LYSMD3-202ENST00000453259 RGS20O76081 388 aa16.6■□□□□ 0.25
LYSMD3-202ENST00000453259 GGPS1O95749 300 aa16.6■□□□□ 0.25
LYSMD3-202ENST00000453259 SDSP20132 328 aa16.6■□□□□ 0.25
LYSMD3-202ENST00000453259 CCND2P30279 289 aa16.6■□□□□ 0.25
LYSMD3-202ENST00000453259 PGM5Q15124 567 aa16.6■□□□□ 0.25
LYSMD3-202ENST00000453259 IMMTQ16891 758 aaKnown RBP16.6■□□□□ 0.25
LYSMD3-202ENST00000453259 GNPTABQ3T906 1256 aa16.6■□□□□ 0.25
LYSMD3-202ENST00000453259 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.6■□□□□ 0.25
LYSMD3-202ENST00000453259 ATP6V0A1Q93050 837 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms