RNA–Protein interactions for RNA: ENST00000452508.6

ATM-203, Transcript of ATM serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATM, Length 12,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-203ENST00000452508 STAG3L1P0CL83 205 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 ARHGEF28Q8N1W1 1705 aaKnown RBP3.91□□□□□ -1.78
ATM-203ENST00000452508 ESYT1Q9BSJ8 1104 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 TLR7Q9NYK1 1049 aaKnown RBP3.91□□□□□ -1.78
ATM-203ENST00000452508 CCDC169A6NNP5 214 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 CAPN9O14815 690 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 PSMD6Q15008 389 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 HLFQ16534 295 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 ARL13BQ3SXY8 428 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 SLFN12LQ6IEE8 588 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 PALM2Q8IXS6 379 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 C7orf31Q8N865 590 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 ENAHQ8N8S7 591 aaPredicted RBP3.91□□□□□ -1.78
ATM-203ENST00000452508 ZNF557Q8N988 423 aaPredicted RBP3.91□□□□□ -1.78
ATM-203ENST00000452508 TYW1Q9NV66 732 aaKnown RBP3.91□□□□□ -1.78
ATM-203ENST00000452508 TUBA8Q9NY65 449 aaPredicted RBP3.91□□□□□ -1.78
ATM-203ENST00000452508 DACT1Q9NYF0 836 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 AGTPBP1Q9UPW5 1226 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 TMEM232C9JQI7 657 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 LIG4P49917 911 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 PRPSAP1Q14558 356 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 GLE1Q53GS7 698 aaKnown RBP3.91□□□□□ -1.78
ATM-203ENST00000452508 TEDDM1Q5T9Z0 273 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 FYB2Q5VWT5 728 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 CC2D1AQ6P1N0 951 aaPredicted RBP3.91□□□□□ -1.78
ATM-203ENST00000452508 DHX32Q7L7V1 743 aaKnown RBP3.91□□□□□ -1.78
ATM-203ENST00000452508 ZSCAN10Q96SZ4 725 aaPredicted RBP3.91□□□□□ -1.78
ATM-203ENST00000452508 NUB1Q9Y5A7 615 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 TNS2Q63HR2 1409 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 ABCB11O95342 1321 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 CNTNAP4Q9C0A0 1308 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 NKRFO15226 690 aaKnown RBP eCLIP3.91□□□□□ -1.78
ATM-203ENST00000452508 ZAP70P43403 619 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 SYKP43405 635 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 RECQLP46063 649 aaPredicted RBP3.91□□□□□ -1.78
ATM-203ENST00000452508 MTERF2Q49AM1 385 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 RNF180Q86T96 592 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.91□□□□□ -1.78
ATM-203ENST00000452508 MRPS27Q92552 414 aaKnown RBP3.91□□□□□ -1.78
ATM-203ENST00000452508 DSCC1Q9BVC3 393 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 MPP6Q9NZW5 540 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 SRRM3A6NNA2 597 aaPredicted RBP3.91□□□□□ -1.78
ATM-203ENST00000452508 CAPN15O75808 1086 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 PCK1P35558 622 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 RGS2P41220 211 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 SERPINB4P48594 390 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 LAMC2Q13753 1193 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 ARHGAP15Q53QZ3 475 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 CHST3Q7LGC8 479 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 DDX42Q86XP3 938 aaKnown RBP eCLIP3.91□□□□□ -1.78
ATM-203ENST00000452508 CCT6BQ92526 530 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 KIAA1586Q9HCI6 787 aa3.91□□□□□ -1.78
ATM-203ENST00000452508 COL5A2P05997 1499 aaPredicted RBP3.9□□□□□ -1.78
ATM-203ENST00000452508 NOP14P78316 857 aaKnown RBP3.9□□□□□ -1.78
ATM-203ENST00000452508 DHX9Q08211 1270 aaKnown RBP3.9□□□□□ -1.78
ATM-203ENST00000452508 MIGA2Q7L4E1 593 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 AGBL3Q8NEM8 1001 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 OSCP1Q8WVF1 389 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 EDC3Q96F86 508 aaKnown RBP3.9□□□□□ -1.78
ATM-203ENST00000452508 OLFM3Q96PB7 478 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 SIKE1Q9BRV8 207 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 RAB17Q9H0T7 212 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 AATFQ9NY61 560 aaKnown RBP eCLIP3.9□□□□□ -1.78
ATM-203ENST00000452508 DDX41Q9UJV9 622 aaKnown RBP3.9□□□□□ -1.78
ATM-203ENST00000452508 ZNRF3Q9ULT6 936 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 CCDC78A2IDD5 438 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 ZWINTO95229 277 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 CDC25BP30305 580 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 ZBTB16Q05516 673 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 KCNH2Q12809 1159 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 SNX17Q15036 470 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 HERC4Q5GLZ8 1057 aaPredicted RBP3.9□□□□□ -1.78
ATM-203ENST00000452508 WDR75Q8IWA0 830 aaKnown RBP3.9□□□□□ -1.78
ATM-203ENST00000452508 ZNF280CQ8ND82 737 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 FAM227BQ96M60 508 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 TIPINQ9BVW5 301 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 COPG1Q9Y678 874 aaKnown RBP3.9□□□□□ -1.78
ATM-203ENST00000452508 ZC3H4Q9UPT8 1303 aaKnown RBP3.9□□□□□ -1.78
ATM-203ENST00000452508 MAP2P11137 1827 aaKnown RBP3.9□□□□□ -1.78
ATM-203ENST00000452508 RASGRF2O14827 1237 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 MGEA5O60502 916 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 GNRH1P01148 92 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 CLCN2P51788 898 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 ADKP55263 362 aaKnown RBP3.9□□□□□ -1.78
ATM-203ENST00000452508 GTF2IP78347 998 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 GUCY1B3Q02153 619 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 TBC1D8BQ0IIM8 1120 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 RAB42Q8N4Z0 105 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 PDCD7Q8N8D1 485 aaKnown RBP3.9□□□□□ -1.78
ATM-203ENST00000452508 KBTBD3Q8NAB2 608 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 FAM210AQ96ND0 272 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 FOXP3Q9BZS1 431 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 GREM2Q9H772 168 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 PIDD1Q9HB75 910 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 TBC1D22BQ9NU19 505 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 DISP2A7MBM2 1401 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 ZNF500O60304 480 aaPredicted RBP3.9□□□□□ -1.78
ATM-203ENST00000452508 ECE2O60344 883 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 RAD51Q06609 339 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 DMPKQ09013 629 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms