RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 TTLL4Q14679 1199 aa27.35■■□□□ 1.97
CPSF4-207ENST00000451876 LHX8Q68G74 356 aa27.35■■□□□ 1.97
CPSF4-207ENST00000451876 IQSEC1Q6DN90 963 aa27.35■■□□□ 1.97
CPSF4-207ENST00000451876 NLRX1Q86UT6 975 aa27.35■■□□□ 1.97
CPSF4-207ENST00000451876 COPS5Q92905 334 aa27.35■■□□□ 1.97
CPSF4-207ENST00000451876 DEFB118Q96PH6 123 aa27.35■■□□□ 1.97
CPSF4-207ENST00000451876 KCNH7Q9NS40 1196 aa27.35■■□□□ 1.97
CPSF4-207ENST00000451876 DDX41Q9UJV9 622 aaKnown RBP27.35■■□□□ 1.97
CPSF4-207ENST00000451876 GNEQ9Y223 722 aaKnown RBP27.35■■□□□ 1.97
CPSF4-207ENST00000451876 KIAA0100Q14667 2235 aaKnown RBP27.35■■□□□ 1.97
CPSF4-207ENST00000451876 SPATA31C2B4DYI2 1134 aa27.34■■□□□ 1.97
CPSF4-207ENST00000451876 ARP10275 920 aa27.34■■□□□ 1.97
CPSF4-207ENST00000451876 DUSP28Q4G0W2 176 aa27.34■■□□□ 1.97
CPSF4-207ENST00000451876 PRR16Q569H4 304 aa27.34■■□□□ 1.97
CPSF4-207ENST00000451876 CCNT1O60563 726 aaKnown RBP27.34■■□□□ 1.97
CPSF4-207ENST00000451876 UBA1P22314 1058 aaKnown RBP27.34■■□□□ 1.97
CPSF4-207ENST00000451876 NIPA1Q7RTP0 329 aa27.34■■□□□ 1.97
CPSF4-207ENST00000451876 PLA2G4DQ86XP0 818 aa27.34■■□□□ 1.97
CPSF4-207ENST00000451876 ABHD8Q96I13 439 aa27.34■■□□□ 1.97
CPSF4-207ENST00000451876 UIMC1Q96RL1 719 aa27.34■■□□□ 1.97
CPSF4-207ENST00000451876 PKD2L1Q9P0L9 805 aa27.34■■□□□ 1.97
CPSF4-207ENST00000451876 CYP3A7-CYP3A51PA0A087WV96 503 aa27.33■■□□□ 1.97
CPSF4-207ENST00000451876 POTEFA5A3E0 1075 aa27.33■■□□□ 1.97
CPSF4-207ENST00000451876 SLC37A4O43826 429 aa27.33■■□□□ 1.97
CPSF4-207ENST00000451876 ATP9AO75110 1047 aa27.33■■□□□ 1.97
CPSF4-207ENST00000451876 ATP2B1P20020 1258 aa27.33■■□□□ 1.97
CPSF4-207ENST00000451876 CYP3A7P24462 503 aa27.33■■□□□ 1.97
CPSF4-207ENST00000451876 MOXD1Q6UVY6 613 aa27.33■■□□□ 1.97
CPSF4-207ENST00000451876 TNS4Q8IZW8 715 aa27.33■■□□□ 1.97
CPSF4-207ENST00000451876 MBOAT7Q96N66 472 aa27.33■■□□□ 1.97
CPSF4-207ENST00000451876 BCAS3Q9H6U6 928 aa27.33■■□□□ 1.97
CPSF4-207ENST00000451876 MSCO60682 206 aa27.32■■□□□ 1.96
CPSF4-207ENST00000451876 RARBP10826 455 aa27.32■■□□□ 1.96
CPSF4-207ENST00000451876 TOB1P50616 345 aaPredicted RBP27.32■■□□□ 1.96
CPSF4-207ENST00000451876 IRX5P78411 483 aaPredicted RBP27.32■■□□□ 1.96
CPSF4-207ENST00000451876 RESTQ13127 1097 aa27.32■■□□□ 1.96
CPSF4-207ENST00000451876 NBR1Q14596 966 aa27.32■■□□□ 1.96
CPSF4-207ENST00000451876 PPP4R3AQ6IN85 833 aa27.32■■□□□ 1.96
CPSF4-207ENST00000451876 SYNRGQ9UMZ2 1314 aa27.32■■□□□ 1.96
CPSF4-207ENST00000451876 SORBS3O60504 671 aa27.31■■□□□ 1.96
CPSF4-207ENST00000451876 DUSP11O75319 330 aaKnown RBP27.31■■□□□ 1.96
CPSF4-207ENST00000451876 TGFB3P10600 412 aa27.31■■□□□ 1.96
CPSF4-207ENST00000451876 KCNA2P16389 499 aa27.31■■□□□ 1.96
CPSF4-207ENST00000451876 SETQ01105 290 aaPredicted RBP27.31■■□□□ 1.96
CPSF4-207ENST00000451876 KCNV1Q6PIU1 500 aa27.31■■□□□ 1.96
CPSF4-207ENST00000451876 TLK2Q86UE8 772 aa27.31■■□□□ 1.96
CPSF4-207ENST00000451876 DDX25Q9UHL0 483 aaKnown RBP27.31■■□□□ 1.96
CPSF4-207ENST00000451876 GJB1P08034 283 aa27.3■■□□□ 1.96
CPSF4-207ENST00000451876 Q4G0T1 1027 aa27.3■■□□□ 1.96
CPSF4-207ENST00000451876 FOXD4L5Q5VV16 416 aaPredicted RBP27.3■■□□□ 1.96
CPSF4-207ENST00000451876 FOXD4L4Q8WXT5 416 aaPredicted RBP27.3■■□□□ 1.96
CPSF4-207ENST00000451876 CDHR1Q96JP9 859 aa27.3■■□□□ 1.96
CPSF4-207ENST00000451876 AGO4Q9HCK5 861 aaKnown RBP27.3■■□□□ 1.96
CPSF4-207ENST00000451876 MAFGO15525 162 aa27.3■■□□□ 1.96
CPSF4-207ENST00000451876 PGK1P00558 417 aa27.3■■□□□ 1.96
CPSF4-207ENST00000451876 GCFC2P16383 781 aaKnown RBP27.3■■□□□ 1.96
CPSF4-207ENST00000451876 U2AF1L4Q8WU68 220 aaKnown RBP27.3■■□□□ 1.96
CPSF4-207ENST00000451876 XPNPEP3Q9NQH7 507 aa27.3■■□□□ 1.96
CPSF4-207ENST00000451876 MKI67P46013 3256 aaKnown RBP27.29■■□□□ 1.96
CPSF4-207ENST00000451876 MSH4O15457 936 aa27.29■■□□□ 1.96
CPSF4-207ENST00000451876 GGPS1O95749 300 aa27.29■■□□□ 1.96
CPSF4-207ENST00000451876 DDIT3P35638 169 aa27.29■■□□□ 1.96
CPSF4-207ENST00000451876 ARHGAP1Q07960 439 aa27.29■■□□□ 1.96
CPSF4-207ENST00000451876 ITGB3BPQ13352 177 aaPredicted RBP27.29■■□□□ 1.96
CPSF4-207ENST00000451876 FAM173BQ6P4H8 233 aa27.29■■□□□ 1.96
CPSF4-207ENST00000451876 BRAPQ7Z569 592 aa27.29■■□□□ 1.96
CPSF4-207ENST00000451876 POTEDQ86YR6 584 aa27.29■■□□□ 1.96
CPSF4-207ENST00000451876 GJA10Q969M2 543 aa27.29■■□□□ 1.96
CPSF4-207ENST00000451876 NOL7Q9UMY1 257 aaKnown RBP27.29■■□□□ 1.96
CPSF4-207ENST00000451876 NKRFO15226 690 aaKnown RBP eCLIP27.28■■□□□ 1.96
CPSF4-207ENST00000451876 DYNC1LI2O43237 492 aaPredicted RBP27.28■■□□□ 1.96
CPSF4-207ENST00000451876 ADAMTS4O75173 837 aa27.28■■□□□ 1.96
CPSF4-207ENST00000451876 ZSCAN22P10073 491 aaPredicted RBP27.28■■□□□ 1.96
CPSF4-207ENST00000451876 TRAPPC10P48553 1259 aa27.28■■□□□ 1.96
CPSF4-207ENST00000451876 TTC38Q5R3I4 469 aa27.28■■□□□ 1.96
CPSF4-207ENST00000451876 MYSM1Q5VVJ2 828 aa27.28■■□□□ 1.96
CPSF4-207ENST00000451876 SENP7Q9BQF6 1050 aa27.28■■□□□ 1.96
CPSF4-207ENST00000451876 TELO2Q9Y4R8 837 aa27.28■■□□□ 1.96
CPSF4-207ENST00000451876 DNAH12Q6ZR08 3092 aa27.28■■□□□ 1.96
CPSF4-207ENST00000451876 MYADML2A6NDP7 307 aa27.27■■□□□ 1.96
CPSF4-207ENST00000451876 IPO5O00410 1097 aaKnown RBP27.27■■□□□ 1.96
CPSF4-207ENST00000451876 CTAGE5O15320 804 aa27.27■■□□□ 1.96
CPSF4-207ENST00000451876 SGPL1O95470 568 aa27.27■■□□□ 1.96
CPSF4-207ENST00000451876 GH1P01241 217 aa27.27■■□□□ 1.96
CPSF4-207ENST00000451876 MCM7P33993 719 aa27.27■■□□□ 1.96
CPSF4-207ENST00000451876 CELF3Q5SZQ8 465 aaKnown RBP27.27■■□□□ 1.96
CPSF4-207ENST00000451876 CYFIP1Q7L576 1253 aa27.27■■□□□ 1.96
CPSF4-207ENST00000451876 OR6J1Q8NGC5 347 aa27.27■■□□□ 1.96
CPSF4-207ENST00000451876 ETNPPLQ8TBG4 499 aa27.27■■□□□ 1.96
CPSF4-207ENST00000451876 NAP1L4Q99733 375 aaKnown RBP27.27■■□□□ 1.96
CPSF4-207ENST00000451876 ZNF577Q9BSK1 485 aa27.27■■□□□ 1.96
CPSF4-207ENST00000451876 TMEM106CQ9BVX2 250 aa27.27■■□□□ 1.96
CPSF4-207ENST00000451876 CRISPLD2Q9H0B8 497 aa27.27■■□□□ 1.96
CPSF4-207ENST00000451876 DAXXQ9UER7 740 aaPredicted RBP27.27■■□□□ 1.96
CPSF4-207ENST00000451876 ZDHHC9Q9Y397 364 aa27.27■■□□□ 1.96
CPSF4-207ENST00000451876 PCDHB6Q9Y5E3 794 aa27.27■■□□□ 1.96
CPSF4-207ENST00000451876 FARP2O94887 1054 aaPredicted RBP27.27■■□□□ 1.96
CPSF4-207ENST00000451876 PDIA4P13667 645 aaKnown RBP27.27■■□□□ 1.96
CPSF4-207ENST00000451876 GJA8P48165 433 aa27.27■■□□□ 1.96
CPSF4-207ENST00000451876 GJA9P57773 515 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms