RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 KHSRPQ92945 711 aaKnown RBP eCLIP20.29■□□□□ 0.84
FAM3A-216ENST00000449971 MAP3K14Q99558 947 aa20.29■□□□□ 0.84
FAM3A-216ENST00000449971 COL20A1Q9P218 1284 aa20.29■□□□□ 0.84
FAM3A-216ENST00000449971 RBAK-RBAKDNI3L0D1 243 aa20.28■□□□□ 0.84
FAM3A-216ENST00000449971 KCNJ6P48051 423 aa20.28■□□□□ 0.84
FAM3A-216ENST00000449971 BRDTQ58F21 947 aaPredicted RBP20.28■□□□□ 0.84
FAM3A-216ENST00000449971 RASEFQ8IZ41 740 aa20.28■□□□□ 0.84
FAM3A-216ENST00000449971 GDPD5Q8WTR4 605 aa20.28■□□□□ 0.84
FAM3A-216ENST00000449971 RMDN3Q96TC7 470 aa20.28■□□□□ 0.84
FAM3A-216ENST00000449971 MTUS1Q9ULD2 1270 aa20.28■□□□□ 0.84
FAM3A-216ENST00000449971 SLC12A7Q9Y666 1083 aa20.28■□□□□ 0.84
FAM3A-216ENST00000449971 RBM47A0AV96 593 aaKnown RBP20.27■□□□□ 0.84
FAM3A-216ENST00000449971 CALM1P0DP23 149 aa20.27■□□□□ 0.84
FAM3A-216ENST00000449971 CALM2P0DP24 149 aa20.27■□□□□ 0.84
FAM3A-216ENST00000449971 CALM3P0DP25 149 aa20.27■□□□□ 0.84
FAM3A-216ENST00000449971 RXRAP19793 462 aa20.27■□□□□ 0.84
FAM3A-216ENST00000449971 POU3F3P20264 500 aaPredicted RBP20.27■□□□□ 0.84
FAM3A-216ENST00000449971 RFC2P35250 354 aa20.27■□□□□ 0.84
FAM3A-216ENST00000449971 GNAQP50148 359 aa20.27■□□□□ 0.84
FAM3A-216ENST00000449971 KRT32Q14532 448 aa20.27■□□□□ 0.84
FAM3A-216ENST00000449971 PPP2R5BQ15173 497 aa20.27■□□□□ 0.84
FAM3A-216ENST00000449971 TSGA10IPQ3SY00 556 aa20.27■□□□□ 0.84
FAM3A-216ENST00000449971 ARHGEF16Q5VV41 709 aa20.27■□□□□ 0.84
FAM3A-216ENST00000449971 RAB11FIP4Q86YS3 637 aa20.27■□□□□ 0.84
FAM3A-216ENST00000449971 PHOSPHO2Q8TCD6 241 aa20.27■□□□□ 0.84
FAM3A-216ENST00000449971 LZTS2Q9BRK4 669 aa20.27■□□□□ 0.84
FAM3A-216ENST00000449971 ZBED2Q9BTP6 218 aa20.27■□□□□ 0.84
FAM3A-216ENST00000449971 LCTP09848 1927 aa20.27■□□□□ 0.84
FAM3A-216ENST00000449971 TET1Q8NFU7 2136 aa20.26■□□□□ 0.83
FAM3A-216ENST00000449971 LCHNA4D1U4 455 aa20.26■□□□□ 0.83
FAM3A-216ENST00000449971 OPLAHO14841 1288 aa20.26■□□□□ 0.83
FAM3A-216ENST00000449971 EIF2AK2P19525 551 aaKnown RBP20.26■□□□□ 0.83
FAM3A-216ENST00000449971 HSD17B4P51659 736 aa20.26■□□□□ 0.83
FAM3A-216ENST00000449971 BFSP2Q13515 415 aa20.26■□□□□ 0.83
FAM3A-216ENST00000449971 ADCK5Q3MIX3 580 aa20.26■□□□□ 0.83
FAM3A-216ENST00000449971 ERICH6BQ5W0A0 696 aa20.26■□□□□ 0.83
FAM3A-216ENST00000449971 SYNE3Q6ZMZ3 975 aa20.26■□□□□ 0.83
FAM3A-216ENST00000449971 DHX32Q7L7V1 743 aaKnown RBP20.26■□□□□ 0.83
FAM3A-216ENST00000449971 SCFD2Q8WU76 684 aa20.26■□□□□ 0.83
FAM3A-216ENST00000449971 RRP36Q96EU6 259 aaKnown RBP20.26■□□□□ 0.83
FAM3A-216ENST00000449971 IWS1Q96ST2 819 aa20.26■□□□□ 0.83
FAM3A-216ENST00000449971 TXNP10599 105 aaKnown RBP20.25■□□□□ 0.83
FAM3A-216ENST00000449971 HOXA13P31271 388 aaPredicted RBP20.25■□□□□ 0.83
FAM3A-216ENST00000449971 EXOSC10Q01780 885 aaKnown RBP20.25■□□□□ 0.83
FAM3A-216ENST00000449971 STXBP2Q15833 593 aa20.25■□□□□ 0.83
FAM3A-216ENST00000449971 TCEANC2Q96MN5 208 aa20.25■□□□□ 0.83
FAM3A-216ENST00000449971 SPZ1Q9BXG8 430 aa20.25■□□□□ 0.83
FAM3A-216ENST00000449971 MAP3K20Q9NYL2 800 aaKnown RBP20.25■□□□□ 0.83
FAM3A-216ENST00000449971 BRWD1Q9NSI6 2320 aa20.24■□□□□ 0.83
FAM3A-216ENST00000449971 GCOM1H8Y6P7 765 aaPredicted RBP20.24■□□□□ 0.83
FAM3A-216ENST00000449971 PITPNM1O00562 1244 aa20.24■□□□□ 0.83
FAM3A-216ENST00000449971 PLEKHA8P1O95397 391 aa20.24■□□□□ 0.83
FAM3A-216ENST00000449971 POLR2MP0CAP2 368 aa20.24■□□□□ 0.83
FAM3A-216ENST00000449971 SMARCA1P28370 1054 aa20.24■□□□□ 0.83
FAM3A-216ENST00000449971 NFRKBQ6P4R8 1299 aa20.24■□□□□ 0.83
FAM3A-216ENST00000449971 SEPT14Q6ZU15 432 aa20.24■□□□□ 0.83
FAM3A-216ENST00000449971 CMTR1Q8N1G2 835 aaKnown RBP20.24■□□□□ 0.83
FAM3A-216ENST00000449971 SRBD1Q8N5C6 995 aaKnown RBP20.24■□□□□ 0.83
FAM3A-216ENST00000449971 SAMD3Q8N6K7 520 aa20.24■□□□□ 0.83
FAM3A-216ENST00000449971 FANCBQ8NB91 859 aa20.24■□□□□ 0.83
FAM3A-216ENST00000449971 PXMP2Q9NR77 195 aa20.24■□□□□ 0.83
FAM3A-216ENST00000449971 SEC63Q9UGP8 760 aaKnown RBP20.24■□□□□ 0.83
FAM3A-216ENST00000449971 NKRFO15226 690 aaKnown RBP eCLIP20.23■□□□□ 0.83
FAM3A-216ENST00000449971 LPXNO60711 386 aa20.23■□□□□ 0.83
FAM3A-216ENST00000449971 REC8O95072 547 aa20.23■□□□□ 0.83
FAM3A-216ENST00000449971 NR3C2P08235 984 aa20.23■□□□□ 0.83
FAM3A-216ENST00000449971 GHRHRQ02643 423 aa20.23■□□□□ 0.83
FAM3A-216ENST00000449971 PTGISQ16647 500 aa20.23■□□□□ 0.83
FAM3A-216ENST00000449971 FAM117BQ6P1L5 589 aa20.23■□□□□ 0.83
FAM3A-216ENST00000449971 SGMS1Q86VZ5 419 aa20.23■□□□□ 0.83
FAM3A-216ENST00000449971 FCHSD1Q86WN1 690 aa20.23■□□□□ 0.83
FAM3A-216ENST00000449971 CCDC82Q8N4S0 544 aa20.23■□□□□ 0.83
FAM3A-216ENST00000449971 EIF3JO75822 258 aaKnown RBP20.22■□□□□ 0.83
FAM3A-216ENST00000449971 HMGB1P09429 215 aaKnown RBP20.22■□□□□ 0.83
FAM3A-216ENST00000449971 MYCLP12524 364 aaPredicted RBP20.22■□□□□ 0.83
FAM3A-216ENST00000449971 WDR5P61964 334 aaKnown RBP20.22■□□□□ 0.83
FAM3A-216ENST00000449971 DEFB103AP81534 67 aa20.22■□□□□ 0.83
FAM3A-216ENST00000449971 MICU3Q86XE3 530 aa20.22■□□□□ 0.83
FAM3A-216ENST00000449971 CD320Q9NPF0 282 aa20.22■□□□□ 0.83
FAM3A-216ENST00000449971 C11orf16Q9NQ32 467 aa20.22■□□□□ 0.83
FAM3A-216ENST00000449971 TRIP12Q14669 1992 aaPredicted RBP20.22■□□□□ 0.83
FAM3A-216ENST00000449971 SCN10AQ9Y5Y9 1956 aa20.22■□□□□ 0.83
FAM3A-216ENST00000449971 KPNA6O60684 536 aa20.21■□□□□ 0.83
FAM3A-216ENST00000449971 BAIAP3O94812 1187 aa20.21■□□□□ 0.83
FAM3A-216ENST00000449971 ARIH2O95376 493 aa20.21■□□□□ 0.83
FAM3A-216ENST00000449971 HSPA4P34932 840 aa20.21■□□□□ 0.83
FAM3A-216ENST00000449971 FGD1P98174 961 aa20.21■□□□□ 0.83
FAM3A-216ENST00000449971 KCNB2Q92953 911 aa20.21■□□□□ 0.83
FAM3A-216ENST00000449971 JAKMIP1Q96N16 626 aaKnown RBP20.21■□□□□ 0.83
FAM3A-216ENST00000449971 UIMC1Q96RL1 719 aa20.21■□□□□ 0.83
FAM3A-216ENST00000449971 PDCD2LQ9BRP1 358 aa20.21■□□□□ 0.83
FAM3A-216ENST00000449971 SNX14Q9Y5W7 946 aa20.21■□□□□ 0.83
FAM3A-216ENST00000449971 COL4A4P53420 1690 aaPredicted RBP20.2■□□□□ 0.82
FAM3A-216ENST00000449971 CPA1P15085 419 aa20.2■□□□□ 0.82
FAM3A-216ENST00000449971 LY6KQ17RY6 165 aa20.2■□□□□ 0.82
FAM3A-216ENST00000449971 GDF6Q6KF10 455 aaPredicted RBP20.2■□□□□ 0.82
FAM3A-216ENST00000449971 CCDC62Q6P9F0 684 aa20.2■□□□□ 0.82
FAM3A-216ENST00000449971 APOA5Q6Q788 366 aa20.2■□□□□ 0.82
FAM3A-216ENST00000449971 TMTC3Q6ZXV5 915 aa20.2■□□□□ 0.82
FAM3A-216ENST00000449971 CCDC155Q8N6L0 562 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms