RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 STK17AQ9UEE5 414 aa10.88□□□□□ -0.67
RFC4-210ENST00000449502 ADD3Q9UEY8 706 aaKnown RBP10.88□□□□□ -0.67
RFC4-210ENST00000449502 ABT1Q9ULW3 272 aaKnown RBP10.88□□□□□ -0.67
RFC4-210ENST00000449502 A0A087X0B3 334 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 POTEMA6NI47 508 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 CHMP2AO43633 222 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 STAM2O75886 525 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 MYL1P05976 194 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 NR3C2P08235 984 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 CYP2C8P10632 490 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 BCRP11274 1271 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 ZNF165P49910 485 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 UVSSAQ2YD98 709 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 PAXIP1Q6ZW49 1069 aaPredicted RBP10.87□□□□□ -0.67
RFC4-210ENST00000449502 GRAMD1CQ8IYS0 662 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 TRIML1Q8N9V2 468 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 SHCBP1Q8NEM2 672 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 DNERQ8NFT8 737 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 CYP2W1Q8TAV3 490 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 SLC5A5Q92911 643 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 CCDC102AQ96A19 550 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 LENG9Q96B70 501 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 MS4A4AQ96JQ5 239 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 IWS1Q96ST2 819 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 RIT2Q99578 217 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 DNAJC25Q9H1X3 360 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 RBPJLQ9UBG7 517 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 PCDHA5Q9Y5H7 936 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 UBIAD1Q9Y5Z9 338 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 IVNS1ABPQ9Y6Y0 642 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 PAPPA2Q9BXP8 1791 aa10.87□□□□□ -0.67
RFC4-210ENST00000449502 BAZ2BQ9UIF8 2168 aaKnown RBP10.86□□□□□ -0.67
RFC4-210ENST00000449502 IGLV3-22A0A075B6J6 115 aa10.86□□□□□ -0.67
RFC4-210ENST00000449502 IPO5O00410 1097 aaKnown RBP10.86□□□□□ -0.67
RFC4-210ENST00000449502 FOXN1O15353 648 aa10.86□□□□□ -0.67
RFC4-210ENST00000449502 MAFGO15525 162 aa10.86□□□□□ -0.67
RFC4-210ENST00000449502 CNMDO75829 334 aa10.86□□□□□ -0.67
RFC4-210ENST00000449502 SSBP05455 408 aaKnown RBP eCLIP10.86□□□□□ -0.67
RFC4-210ENST00000449502 PRR29P0C7W0 189 aa10.86□□□□□ -0.67
RFC4-210ENST00000449502 ARP10275 920 aa10.86□□□□□ -0.67
RFC4-210ENST00000449502 FCER1AP12319 257 aa10.86□□□□□ -0.67
RFC4-210ENST00000449502 ERVK-9P63128 1117 aa10.86□□□□□ -0.67
RFC4-210ENST00000449502 ERVK-24P63145 666 aa10.86□□□□□ -0.67
RFC4-210ENST00000449502 PDE4DQ08499 809 aa10.86□□□□□ -0.67
RFC4-210ENST00000449502 DHX8Q14562 1220 aaKnown RBP10.86□□□□□ -0.67
RFC4-210ENST00000449502 STXBP2Q15833 593 aa10.86□□□□□ -0.67
RFC4-210ENST00000449502 E2F4Q16254 413 aa10.86□□□□□ -0.67
RFC4-210ENST00000449502 ISM2Q6H9L7 571 aa10.86□□□□□ -0.67
RFC4-210ENST00000449502 PDXDC2PQ6P474 469 aa10.86□□□□□ -0.67
RFC4-210ENST00000449502 RASAL3Q86YV0 1011 aa10.86□□□□□ -0.67
RFC4-210ENST00000449502 GJA10Q969M2 543 aa10.86□□□□□ -0.67
RFC4-210ENST00000449502 GPRASP2Q96D09 838 aa10.86□□□□□ -0.67
RFC4-210ENST00000449502 ZFP91Q96JP5 570 aaPredicted RBP10.86□□□□□ -0.67
RFC4-210ENST00000449502 GSDMAQ96QA5 445 aa10.86□□□□□ -0.67
RFC4-210ENST00000449502 TBC1D22BQ9NU19 505 aa10.86□□□□□ -0.67
RFC4-210ENST00000449502 PKD2L1Q9P0L9 805 aa10.86□□□□□ -0.67
RFC4-210ENST00000449502 TUBE1Q9UJT0 475 aa10.86□□□□□ -0.67
RFC4-210ENST00000449502 MAN1B1Q9UKM7 699 aa10.86□□□□□ -0.67
RFC4-210ENST00000449502 DNM3Q9UQ16 869 aa10.86□□□□□ -0.67
RFC4-210ENST00000449502 FRMPD4Q14CM0 1322 aa10.85□□□□□ -0.67
RFC4-210ENST00000449502 SMTNL1A8MU46 457 aa10.85□□□□□ -0.67
RFC4-210ENST00000449502 DDX39AO00148 427 aaKnown RBP10.85□□□□□ -0.67
RFC4-210ENST00000449502 KRT18P05783 430 aaKnown RBP10.85□□□□□ -0.67
RFC4-210ENST00000449502 ITGB5P18084 799 aa10.85□□□□□ -0.67
RFC4-210ENST00000449502 INHBEP58166 350 aa10.85□□□□□ -0.67
RFC4-210ENST00000449502 ASIC1P78348 528 aa10.85□□□□□ -0.67
RFC4-210ENST00000449502 PLCB2Q00722 1185 aa10.85□□□□□ -0.67
RFC4-210ENST00000449502 MDM2Q00987 491 aaPredicted RBP10.85□□□□□ -0.67
RFC4-210ENST00000449502 SREBF2Q12772 1141 aa10.85□□□□□ -0.67
RFC4-210ENST00000449502 MIER3Q7Z3K6 550 aa10.85□□□□□ -0.67
RFC4-210ENST00000449502 SH3RF1Q7Z6J0 888 aa10.85□□□□□ -0.67
RFC4-210ENST00000449502 VSIG10LQ86VR7 867 aa10.85□□□□□ -0.67
RFC4-210ENST00000449502 ANKRD13CQ8N6S4 541 aa10.85□□□□□ -0.67
RFC4-210ENST00000449502 MLKLQ8NB16 471 aa10.85□□□□□ -0.67
RFC4-210ENST00000449502 IL31RAQ8NI17 732 aa10.85□□□□□ -0.67
RFC4-210ENST00000449502 NEK9Q8TD19 979 aa10.85□□□□□ -0.67
RFC4-210ENST00000449502 LARP4BQ92615 738 aaKnown RBP10.85□□□□□ -0.67
RFC4-210ENST00000449502 RAD54LQ92698 747 aa10.85□□□□□ -0.67
RFC4-210ENST00000449502 STAMQ92783 540 aa10.85□□□□□ -0.67
RFC4-210ENST00000449502 PURBQ96QR8 312 aaKnown RBP10.85□□□□□ -0.67
RFC4-210ENST00000449502 MMTAG2Q9BU76 263 aaKnown RBP10.85□□□□□ -0.67
RFC4-210ENST00000449502 GTPBP4Q9BZE4 634 aaKnown RBP10.85□□□□□ -0.67
RFC4-210ENST00000449502 BLZF1Q9H2G9 400 aa10.85□□□□□ -0.67
RFC4-210ENST00000449502 AGO4Q9HCK5 861 aaKnown RBP10.85□□□□□ -0.67
RFC4-210ENST00000449502 KCNH7Q9NS40 1196 aa10.85□□□□□ -0.67
RFC4-210ENST00000449502 KIAA1024Q9UPX6 916 aa10.85□□□□□ -0.67
RFC4-210ENST00000449502 SAMM50Q9Y512 469 aa10.85□□□□□ -0.67
RFC4-210ENST00000449502 ATAD5Q96QE3 1844 aa10.84□□□□□ -0.67
RFC4-210ENST00000449502 MYH6P13533 1939 aa10.84□□□□□ -0.67
RFC4-210ENST00000449502 TMEM88BA6NKF7 163 aa10.84□□□□□ -0.67
RFC4-210ENST00000449502 PEX10O60683 326 aa10.84□□□□□ -0.67
RFC4-210ENST00000449502 EIF3JO75822 258 aaKnown RBP10.84□□□□□ -0.67
RFC4-210ENST00000449502 PSMD10O75832 226 aa10.84□□□□□ -0.67
RFC4-210ENST00000449502 RPN1P04843 607 aaKnown RBP10.84□□□□□ -0.67
RFC4-210ENST00000449502 RPA1P27694 616 aa10.84□□□□□ -0.67
RFC4-210ENST00000449502 ALDH5A1P51649 535 aaPredicted RBP10.84□□□□□ -0.67
RFC4-210ENST00000449502 MRPS9P82933 396 aaKnown RBP10.84□□□□□ -0.67
RFC4-210ENST00000449502 DPYDQ12882 1025 aa10.84□□□□□ -0.67
RFC4-210ENST00000449502 SEMA3FQ13275 785 aa10.84□□□□□ -0.67
RFC4-210ENST00000449502 GRB10Q13322 594 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms