RNA–Protein interactions for RNA: ENST00000449279.5

SEM1-206, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 3

Gene SEM1, Length 699 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-206ENST00000449279 CCDC144BQ3MJ40 725 aa11.22□□□□□ -0.61
SEM1-206ENST00000449279 CEP55Q53EZ4 464 aa11.22□□□□□ -0.61
SEM1-206ENST00000449279 PRR16Q569H4 304 aa11.22□□□□□ -0.61
SEM1-206ENST00000449279 MFSD14CQ5VZR4 134 aa11.22□□□□□ -0.61
SEM1-206ENST00000449279 PLA2G4DQ86XP0 818 aa11.22□□□□□ -0.61
SEM1-206ENST00000449279 TEX2Q8IWB9 1127 aa11.22□□□□□ -0.61
SEM1-206ENST00000449279 PXYLP1Q8TE99 480 aa11.22□□□□□ -0.61
SEM1-206ENST00000449279 USP28Q96RU2 1077 aa11.22□□□□□ -0.61
SEM1-206ENST00000449279 UNC93B1Q9H1C4 597 aa11.22□□□□□ -0.61
SEM1-206ENST00000449279 EHMT1Q9H9B1 1298 aa11.22□□□□□ -0.61
SEM1-206ENST00000449279 VTA1Q9NP79 307 aa11.22□□□□□ -0.61
SEM1-206ENST00000449279 JADE2Q9NQC1 790 aa11.22□□□□□ -0.61
SEM1-206ENST00000449279 SIP14410 1827 aa11.21□□□□□ -0.61
SEM1-206ENST00000449279 CYP3A7-CYP3A51PA0A087WV96 503 aa11.21□□□□□ -0.61
SEM1-206ENST00000449279 LOC102724159A0A0B4J2E5 919 aa11.21□□□□□ -0.61
SEM1-206ENST00000449279 RBM47A0AV96 593 aaKnown RBP11.21□□□□□ -0.61
SEM1-206ENST00000449279 SPATA31C2B4DYI2 1134 aa11.21□□□□□ -0.61
SEM1-206ENST00000449279 MEIS1O00470 390 aa11.21□□□□□ -0.61
SEM1-206ENST00000449279 MSH4O15457 936 aa11.21□□□□□ -0.61
SEM1-206ENST00000449279 EIF3JO75822 258 aaKnown RBP11.21□□□□□ -0.61
SEM1-206ENST00000449279 SMPD1P17405 629 aa11.21□□□□□ -0.61
SEM1-206ENST00000449279 UBA1P22314 1058 aaKnown RBP11.21□□□□□ -0.61
SEM1-206ENST00000449279 CYP3A7P24462 503 aa11.21□□□□□ -0.61
SEM1-206ENST00000449279 USP11P51784 963 aa11.21□□□□□ -0.61
SEM1-206ENST00000449279 CEBPZQ03701 1054 aaKnown RBP11.21□□□□□ -0.61
SEM1-206ENST00000449279 MTMR1Q13613 665 aa11.21□□□□□ -0.61
SEM1-206ENST00000449279 PWP2Q15269 919 aaKnown RBP11.21□□□□□ -0.61
SEM1-206ENST00000449279 LY6KQ17RY6 165 aa11.21□□□□□ -0.61
SEM1-206ENST00000449279 SLC9C1Q4G0N8 1177 aa11.21□□□□□ -0.61
SEM1-206ENST00000449279 MCTP2Q6DN12 878 aa11.21□□□□□ -0.61
SEM1-206ENST00000449279 CCDC62Q6P9F0 684 aa11.21□□□□□ -0.61
SEM1-206ENST00000449279 BRAPQ7Z569 592 aa11.21□□□□□ -0.61
SEM1-206ENST00000449279 MSL3Q8N5Y2 521 aaKnown RBP11.21□□□□□ -0.61
SEM1-206ENST00000449279 HAS1Q92839 578 aa11.21□□□□□ -0.61
SEM1-206ENST00000449279 ABHD16BQ9H3Z7 469 aa11.21□□□□□ -0.61
SEM1-206ENST00000449279 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.21□□□□□ -0.61
SEM1-206ENST00000449279 KCNH7Q9NS40 1196 aa11.21□□□□□ -0.61
SEM1-206ENST00000449279 TFIP11Q9UBB9 837 aaKnown RBP11.21□□□□□ -0.61
SEM1-206ENST00000449279 DDX25Q9UHL0 483 aaKnown RBP11.21□□□□□ -0.61
SEM1-206ENST00000449279 CLIC4Q9Y696 253 aa11.21□□□□□ -0.61
SEM1-206ENST00000449279 MYADML2A6NDP7 307 aa11.2□□□□□ -0.62
SEM1-206ENST00000449279 DDX39AO00148 427 aaKnown RBP11.2□□□□□ -0.62
SEM1-206ENST00000449279 KCNA2P16389 499 aa11.2□□□□□ -0.62
SEM1-206ENST00000449279 CNGA1P29973 690 aa11.2□□□□□ -0.62
SEM1-206ENST00000449279 DNM1Q05193 864 aaKnown RBP11.2□□□□□ -0.62
SEM1-206ENST00000449279 IL17AQ16552 155 aa11.2□□□□□ -0.62
SEM1-206ENST00000449279 COL13A1Q5TAT6 717 aaPredicted RBP11.2□□□□□ -0.62
SEM1-206ENST00000449279 XRRA1Q6P2D8 792 aa11.2□□□□□ -0.62
SEM1-206ENST00000449279 TRMT44Q8IYL2 757 aaKnown RBP11.2□□□□□ -0.62
SEM1-206ENST00000449279 C4orf32Q8N8J7 132 aa11.2□□□□□ -0.62
SEM1-206ENST00000449279 ETNPPLQ8TBG4 499 aa11.2□□□□□ -0.62
SEM1-206ENST00000449279 AGO4Q9HCK5 861 aaKnown RBP11.2□□□□□ -0.62
SEM1-206ENST00000449279 DDX41Q9UJV9 622 aaKnown RBP11.2□□□□□ -0.62
SEM1-206ENST00000449279 NOL7Q9UMY1 257 aaKnown RBP11.2□□□□□ -0.62
SEM1-206ENST00000449279 CNPY2Q9Y2B0 182 aa11.2□□□□□ -0.62
SEM1-206ENST00000449279 DHX15O43143 795 aaKnown RBP11.19□□□□□ -0.62
SEM1-206ENST00000449279 FIBPO43427 364 aa11.19□□□□□ -0.62
SEM1-206ENST00000449279 TXNP10599 105 aaKnown RBP11.19□□□□□ -0.62
SEM1-206ENST00000449279 CCL5P13501 91 aa11.19□□□□□ -0.62
SEM1-206ENST00000449279 ICAM3P32942 547 aa11.19□□□□□ -0.62
SEM1-206ENST00000449279 SP4Q02446 784 aa11.19□□□□□ -0.62
SEM1-206ENST00000449279 TNFAIP2Q03169 654 aa11.19□□□□□ -0.62
SEM1-206ENST00000449279 GRIN1Q05586 938 aa11.19□□□□□ -0.62
SEM1-206ENST00000449279 ARHGAP1Q07960 439 aa11.19□□□□□ -0.62
SEM1-206ENST00000449279 PTPAQ15257 358 aa11.19□□□□□ -0.62
SEM1-206ENST00000449279 SF3A1Q15459 793 aaKnown RBP11.19□□□□□ -0.62
SEM1-206ENST00000449279 Q4G0T1 1027 aa11.19□□□□□ -0.62
SEM1-206ENST00000449279 RILPL1Q5EBL4 403 aa11.19□□□□□ -0.62
SEM1-206ENST00000449279 PPP4R3AQ6IN85 833 aa11.19□□□□□ -0.62
SEM1-206ENST00000449279 MOXD1Q6UVY6 613 aa11.19□□□□□ -0.62
SEM1-206ENST00000449279 NIPA1Q7RTP0 329 aa11.19□□□□□ -0.62
SEM1-206ENST00000449279 SCFD2Q8WU76 684 aa11.19□□□□□ -0.62
SEM1-206ENST00000449279 SLC5A5Q92911 643 aa11.19□□□□□ -0.62
SEM1-206ENST00000449279 GPRASP2Q96D09 838 aa11.19□□□□□ -0.62
SEM1-206ENST00000449279 ZNF333Q96JL9 665 aa11.19□□□□□ -0.62
SEM1-206ENST00000449279 MPHOSPH6Q99547 160 aaKnown RBP11.19□□□□□ -0.62
SEM1-206ENST00000449279 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.19□□□□□ -0.62
SEM1-206ENST00000449279 ZSCAN16Q9H4T2 348 aaPredicted RBP11.19□□□□□ -0.62
SEM1-206ENST00000449279 KCNMB3Q9NPA1 279 aa11.19□□□□□ -0.62
SEM1-206ENST00000449279 CIZ1Q9ULV3 898 aaPredicted RBP11.19□□□□□ -0.62
SEM1-206ENST00000449279 SYNRGQ9UMZ2 1314 aa11.18□□□□□ -0.62
SEM1-206ENST00000449279 B4DLN1 442 aa11.18□□□□□ -0.62
SEM1-206ENST00000449279 IPO5O00410 1097 aaKnown RBP11.18□□□□□ -0.62
SEM1-206ENST00000449279 CTAGE5O15320 804 aa11.18□□□□□ -0.62
SEM1-206ENST00000449279 NEMFO60524 1076 aa11.18□□□□□ -0.62
SEM1-206ENST00000449279 STAM2O75886 525 aa11.18□□□□□ -0.62
SEM1-206ENST00000449279 GGPS1O95749 300 aa11.18□□□□□ -0.62
SEM1-206ENST00000449279 CCNE2O96020 404 aa11.18□□□□□ -0.62
SEM1-206ENST00000449279 TRAPPC10P48553 1259 aa11.18□□□□□ -0.62
SEM1-206ENST00000449279 NUCB2P80303 420 aa11.18□□□□□ -0.62
SEM1-206ENST00000449279 PTGDRQ13258 359 aa11.18□□□□□ -0.62
SEM1-206ENST00000449279 CYFIP1Q7L576 1253 aa11.18□□□□□ -0.62
SEM1-206ENST00000449279 NLRX1Q86UT6 975 aa11.18□□□□□ -0.62
SEM1-206ENST00000449279 ARMC5Q96C12 935 aa11.18□□□□□ -0.62
SEM1-206ENST00000449279 MTMR9Q96QG7 549 aa11.18□□□□□ -0.62
SEM1-206ENST00000449279 ZNF577Q9BSK1 485 aa11.18□□□□□ -0.62
SEM1-206ENST00000449279 GDPD2Q9HCC8 539 aa11.18□□□□□ -0.62
SEM1-206ENST00000449279 CHMP5Q9NZZ3 219 aa11.18□□□□□ -0.62
SEM1-206ENST00000449279 GNEQ9Y223 722 aaKnown RBP11.18□□□□□ -0.62
SEM1-206ENST00000449279 BRCA2P51587 3418 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms