RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 TXKP42681 527 aa21.76■■□□□ 1.07
RPS28-202ENST00000449223 SPIRE1Q08AE8 756 aa21.76■■□□□ 1.07
RPS28-202ENST00000449223 MTMR1Q13613 665 aa21.76■■□□□ 1.07
RPS28-202ENST00000449223 CCDC73Q6ZRK6 1079 aa21.76■■□□□ 1.07
RPS28-202ENST00000449223 FMR1NBQ8N0W7 255 aaPredicted RBP21.76■■□□□ 1.07
RPS28-202ENST00000449223 PCDHA12Q9UN75 941 aa21.76■■□□□ 1.07
RPS28-202ENST00000449223 COBLO75128 1261 aa21.75■■□□□ 1.07
RPS28-202ENST00000449223 PSMD10O75832 226 aa21.75■■□□□ 1.07
RPS28-202ENST00000449223 ARP10275 920 aa21.75■■□□□ 1.07
RPS28-202ENST00000449223 MYCLP12524 364 aaPredicted RBP21.75■■□□□ 1.07
RPS28-202ENST00000449223 PFKFB1P16118 471 aa21.75■■□□□ 1.07
RPS28-202ENST00000449223 SYMPKQ92797 1274 aaKnown RBP21.75■■□□□ 1.07
RPS28-202ENST00000449223 CDHR1Q96JP9 859 aa21.75■■□□□ 1.07
RPS28-202ENST00000449223 RIT2Q99578 217 aa21.75■■□□□ 1.07
RPS28-202ENST00000449223 WDR11Q9BZH6 1224 aa21.75■■□□□ 1.07
RPS28-202ENST00000449223 CCSER1Q9C0I3 900 aa21.75■■□□□ 1.07
RPS28-202ENST00000449223 FAM13BQ9NYF5 915 aa21.75■■□□□ 1.07
RPS28-202ENST00000449223 A0A1B0GVL5 298 aa21.75■■□□□ 1.07
RPS28-202ENST00000449223 ASB14A6NK59 587 aa21.75■■□□□ 1.07
RPS28-202ENST00000449223 IPO5O00410 1097 aaKnown RBP21.75■■□□□ 1.07
RPS28-202ENST00000449223 HOXC6P09630 235 aa21.75■■□□□ 1.07
RPS28-202ENST00000449223 ICAM3P32942 547 aa21.75■■□□□ 1.07
RPS28-202ENST00000449223 TECP42680 631 aa21.75■■□□□ 1.07
RPS28-202ENST00000449223 NDUFA8P51970 172 aa21.75■■□□□ 1.07
RPS28-202ENST00000449223 HTRA3P83110 453 aa21.75■■□□□ 1.07
RPS28-202ENST00000449223 GNPTABQ3T906 1256 aa21.75■■□□□ 1.07
RPS28-202ENST00000449223 B3GNT9Q6UX72 402 aa21.75■■□□□ 1.07
RPS28-202ENST00000449223 MAMDC4Q6UXC1 1216 aa21.75■■□□□ 1.07
RPS28-202ENST00000449223 NLRX1Q86UT6 975 aa21.75■■□□□ 1.07
RPS28-202ENST00000449223 USP6NLQ92738 828 aa21.75■■□□□ 1.07
RPS28-202ENST00000449223 VAV3Q9UKW4 847 aa21.75■■□□□ 1.07
RPS28-202ENST00000449223 MCM3APO60318 1980 aa21.74■■□□□ 1.07
RPS28-202ENST00000449223 NR1I2O75469 434 aa21.74■■□□□ 1.07
RPS28-202ENST00000449223 PPP2R5CQ13362 524 aa21.74■■□□□ 1.07
RPS28-202ENST00000449223 USP49Q70CQ1 688 aa21.74■■□□□ 1.07
RPS28-202ENST00000449223 MSL3Q8N5Y2 521 aaKnown RBP21.74■■□□□ 1.07
RPS28-202ENST00000449223 EPSTI1Q96J88 318 aa21.74■■□□□ 1.07
RPS28-202ENST00000449223 ZNF577Q9BSK1 485 aa21.74■■□□□ 1.07
RPS28-202ENST00000449223 AGO4Q9HCK5 861 aaKnown RBP21.74■■□□□ 1.07
RPS28-202ENST00000449223 DDX19AQ9NUU7 478 aaKnown RBP21.74■■□□□ 1.07
RPS28-202ENST00000449223 KCNH3Q9ULD8 1083 aa21.74■■□□□ 1.07
RPS28-202ENST00000449223 SLC26A4O43511 780 aa21.73■■□□□ 1.07
RPS28-202ENST00000449223 MARCH6O60337 910 aa21.73■■□□□ 1.07
RPS28-202ENST00000449223 HSPA6P17066 643 aa21.73■■□□□ 1.07
RPS28-202ENST00000449223 PDE4DQ08499 809 aa21.73■■□□□ 1.07
RPS28-202ENST00000449223 SEMA3FQ13275 785 aa21.73■■□□□ 1.07
RPS28-202ENST00000449223 SPECC1Q5M775 1068 aa21.73■■□□□ 1.07
RPS28-202ENST00000449223 SOCS4Q8WXH5 440 aa21.73■■□□□ 1.07
RPS28-202ENST00000449223 RNF186Q9NXI6 227 aa21.73■■□□□ 1.07
RPS28-202ENST00000449223 SAGE1Q9NXZ1 904 aa21.73■■□□□ 1.07
RPS28-202ENST00000449223 SLC5A4Q9NY91 659 aa21.73■■□□□ 1.07
RPS28-202ENST00000449223 DACT1Q9NYF0 836 aa21.73■■□□□ 1.07
RPS28-202ENST00000449223 SPATA31C2B4DYI2 1134 aa21.72■■□□□ 1.07
RPS28-202ENST00000449223 DHX15O43143 795 aaKnown RBP21.72■■□□□ 1.07
RPS28-202ENST00000449223 LACTBP83111 547 aaPredicted RBP21.72■■□□□ 1.07
RPS28-202ENST00000449223 MAP2K5Q13163 448 aa21.72■■□□□ 1.07
RPS28-202ENST00000449223 OTOP1Q7RTM1 612 aa21.72■■□□□ 1.07
RPS28-202ENST00000449223 ZFP91Q96JP5 570 aaPredicted RBP21.72■■□□□ 1.07
RPS28-202ENST00000449223 TIGD1Q96MW7 591 aa21.72■■□□□ 1.07
RPS28-202ENST00000449223 PYM1Q9BRP8 204 aaKnown RBP21.72■■□□□ 1.07
RPS28-202ENST00000449223 TBC1D22BQ9NU19 505 aa21.72■■□□□ 1.07
RPS28-202ENST00000449223 LRWD1Q9UFC0 647 aa21.72■■□□□ 1.07
RPS28-202ENST00000449223 STK24Q9Y6E0 443 aa21.72■■□□□ 1.07
RPS28-202ENST00000449223 POTEMA6NI47 508 aa21.71■■□□□ 1.07
RPS28-202ENST00000449223 TGFB3P10600 412 aa21.71■■□□□ 1.07
RPS28-202ENST00000449223 TXLNAP40222 546 aa21.71■■□□□ 1.07
RPS28-202ENST00000449223 SYKP43405 635 aa21.71■■□□□ 1.07
RPS28-202ENST00000449223 ITGB3BPQ13352 177 aaPredicted RBP21.71■■□□□ 1.07
RPS28-202ENST00000449223 LRCH2Q5VUJ6 765 aa21.71■■□□□ 1.07
RPS28-202ENST00000449223 DPP9Q86TI2 863 aa21.71■■□□□ 1.07
RPS28-202ENST00000449223 GJA10Q969M2 543 aa21.71■■□□□ 1.07
RPS28-202ENST00000449223 MAML3Q96JK9 1138 aa21.71■■□□□ 1.07
RPS28-202ENST00000449223 MMTAG2Q9BU76 263 aaKnown RBP21.71■■□□□ 1.07
RPS28-202ENST00000449223 GJD2Q9UKL4 321 aa21.71■■□□□ 1.07
RPS28-202ENST00000449223 CASP8AP2Q9UKL3 1982 aa21.71■■□□□ 1.07
RPS28-202ENST00000449223 NFASCO94856 1347 aa21.71■■□□□ 1.07
RPS28-202ENST00000449223 SYNGAP1Q96PV0 1343 aa21.71■■□□□ 1.07
RPS28-202ENST00000449223 GAS7O60861 476 aa21.7■■□□□ 1.07
RPS28-202ENST00000449223 ZNF202O95125 648 aa21.7■■□□□ 1.07
RPS28-202ENST00000449223 UBA7P41226 1012 aa21.7■■□□□ 1.07
RPS28-202ENST00000449223 IRF5Q13568 498 aa21.7■■□□□ 1.07
RPS28-202ENST00000449223 ELOA2Q8IYF1 753 aaPredicted RBP21.7■■□□□ 1.07
RPS28-202ENST00000449223 SYAP1Q96A49 352 aaPredicted RBP21.7■■□□□ 1.07
RPS28-202ENST00000449223 SENP7Q9BQF6 1050 aa21.7■■□□□ 1.07
RPS28-202ENST00000449223 TMEM63CQ9P1W3 806 aa21.7■■□□□ 1.07
RPS28-202ENST00000449223 PCNTO95613 3336 aa21.7■■□□□ 1.06
RPS28-202ENST00000449223 PP2D1A8MPX8 630 aa21.7■■□□□ 1.06
RPS28-202ENST00000449223 IGHA2P01877 340 aa21.7■■□□□ 1.06
RPS28-202ENST00000449223 KCNA2P16389 499 aa21.7■■□□□ 1.06
RPS28-202ENST00000449223 CTGFP29279 349 aa21.7■■□□□ 1.06
RPS28-202ENST00000449223 FCGRTP55899 365 aa21.7■■□□□ 1.06
RPS28-202ENST00000449223 C1QTNF8P60827 252 aa21.7■■□□□ 1.06
RPS28-202ENST00000449223 HYIQ5T013 277 aa21.7■■□□□ 1.06
RPS28-202ENST00000449223 KCNV1Q6PIU1 500 aa21.7■■□□□ 1.06
RPS28-202ENST00000449223 ARMCX2Q7L311 632 aa21.7■■□□□ 1.06
RPS28-202ENST00000449223 NUDT12Q9BQG2 462 aa21.7■■□□□ 1.06
RPS28-202ENST00000449223 TEKT3Q9BXF9 490 aa21.7■■□□□ 1.06
RPS28-202ENST00000449223 USP25Q9UHP3 1055 aa21.7■■□□□ 1.06
RPS28-202ENST00000449223 ZSWIM8A7E2V4 1837 aa21.69■■□□□ 1.06
RPS28-202ENST00000449223 A0A087X0B3 334 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms