RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 GLIS2Q9BZE0 524 aaPredicted RBP11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 TRIM9Q9C026 710 aa11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 EXOC1Q9NV70 894 aa11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 GGA3Q9NZ52 723 aa11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 CCPG1Q9ULG6 757 aa11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 ASTN2O75129 1339 aaPredicted RBP11.84□□□□□ -0.51
VIPAS39-203ENST00000448935 POTEMA6NI47 508 aa11.83□□□□□ -0.52
VIPAS39-203ENST00000448935 PSMA7O14818 248 aa11.83□□□□□ -0.52
VIPAS39-203ENST00000448935 ZBED4O75132 1171 aa11.83□□□□□ -0.52
VIPAS39-203ENST00000448935 ATP1A3P13637 1013 aa11.83□□□□□ -0.52
VIPAS39-203ENST00000448935 INPP5BP32019 993 aa11.83□□□□□ -0.52
VIPAS39-203ENST00000448935 ASIC1P78348 528 aa11.83□□□□□ -0.52
VIPAS39-203ENST00000448935 KMT5BQ4FZB7 885 aa11.83□□□□□ -0.52
VIPAS39-203ENST00000448935 FILIP1LQ4L180 1135 aa11.83□□□□□ -0.52
VIPAS39-203ENST00000448935 PRR16Q569H4 304 aa11.83□□□□□ -0.52
VIPAS39-203ENST00000448935 KLHL10Q6JEL2 608 aa11.83□□□□□ -0.52
VIPAS39-203ENST00000448935 FCHSD1Q86WN1 690 aa11.83□□□□□ -0.52
VIPAS39-203ENST00000448935 ZNF280CQ8ND82 737 aa11.83□□□□□ -0.52
VIPAS39-203ENST00000448935 ETNPPLQ8TBG4 499 aa11.83□□□□□ -0.52
VIPAS39-203ENST00000448935 TRPM4Q8TD43 1214 aa11.83□□□□□ -0.52
VIPAS39-203ENST00000448935 RAD54LQ92698 747 aa11.83□□□□□ -0.52
VIPAS39-203ENST00000448935 PNMA5Q96PV4 448 aa11.83□□□□□ -0.52
VIPAS39-203ENST00000448935 TANGO6Q9C0B7 1094 aa11.83□□□□□ -0.52
VIPAS39-203ENST00000448935 ADARB2Q9NS39 739 aaKnown RBP11.83□□□□□ -0.52
VIPAS39-203ENST00000448935 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.83□□□□□ -0.52
VIPAS39-203ENST00000448935 SCAF8Q9UPN6 1271 aaKnown RBP11.83□□□□□ -0.52
VIPAS39-203ENST00000448935 RBBP6Q7Z6E9 1792 aaKnown RBP11.83□□□□□ -0.52
VIPAS39-203ENST00000448935 KLRC4O43908 158 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 PTPRAP18433 802 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 HOXA13P31271 388 aaPredicted RBP11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 CCT6AP40227 531 aaKnown RBP11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 BACE1P56817 501 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 SETQ01105 290 aaPredicted RBP11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 MTMR2Q13614 643 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 COBLL1Q53SF7 1204 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 NOL9Q5SY16 702 aaKnown RBP11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 TMEM92Q6UXU6 159 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 FILIP1Q7Z7B0 1213 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 TRMT44Q8IYL2 757 aaKnown RBP11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 ADSSL1Q8N142 457 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 GIMAP8Q8ND71 665 aaPredicted RBP11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 DHTKD1Q96HY7 919 aaPredicted RBP11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 L3MBTL3Q96JM7 780 aaPredicted RBP11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 C12orf42Q96LP6 360 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 ZNF830Q96NB3 372 aaPredicted RBP11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 SLC38A10Q9HBR0 1119 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 FBXO28Q9NVF7 368 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 NRBP1Q9UHY1 535 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 PPP1R9AQ9ULJ8 1098 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 CTNND2Q9UQB3 1225 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 BICDL2A1A5D9 508 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 FLOT1O75955 427 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 VCAM1P19320 739 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 EPS15P42566 896 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 HSD17B4P51659 736 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 GHRHRQ02643 423 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 SPP2Q13103 211 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 PSMD2Q13200 908 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 SKIV2LQ15477 1246 aaKnown RBP11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 UNC13DQ70J99 1090 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 KRT26Q7Z3Y9 468 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 TMC6Q7Z403 805 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 CCDC84Q86UT8 332 aaPredicted RBP11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 LRRC8AQ8IWT6 810 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 KIAA1524Q8TCG1 905 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 NOC3LQ8WTT2 800 aaKnown RBP11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 NELFBQ8WX92 580 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 KLRG1Q96E93 195 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 KCNF1Q9H3M0 494 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 BLOC1S4Q9NUP1 217 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 RNF181Q9P0P0 153 aa11.82□□□□□ -0.52
VIPAS39-203ENST00000448935 PRCPP42785 496 aa11.81□□□□□ -0.52
VIPAS39-203ENST00000448935 CCDC144BQ3MJ40 725 aa11.81□□□□□ -0.52
VIPAS39-203ENST00000448935 CDKAL1Q5VV42 579 aa11.81□□□□□ -0.52
VIPAS39-203ENST00000448935 SMYD4Q8IYR2 804 aaPredicted RBP11.81□□□□□ -0.52
VIPAS39-203ENST00000448935 DCPSQ96C86 337 aaKnown RBP11.81□□□□□ -0.52
VIPAS39-203ENST00000448935 P2RX7Q99572 595 aaKnown RBP11.81□□□□□ -0.52
VIPAS39-203ENST00000448935 SYT17Q9BSW7 474 aa11.81□□□□□ -0.52
VIPAS39-203ENST00000448935 MAF1Q9H063 256 aa11.81□□□□□ -0.52
VIPAS39-203ENST00000448935 RPAP3Q9H6T3 665 aaPredicted RBP11.81□□□□□ -0.52
VIPAS39-203ENST00000448935 TMOD4Q9NZQ9 345 aa11.81□□□□□ -0.52
VIPAS39-203ENST00000448935 PARP14Q460N5 1801 aa11.81□□□□□ -0.52
VIPAS39-203ENST00000448935 PHIPQ8WWQ0 1821 aa11.8□□□□□ -0.52
VIPAS39-203ENST00000448935 ZNF536O15090 1300 aa11.8□□□□□ -0.52
VIPAS39-203ENST00000448935 FAM86B1E9PN63 330 aa11.8□□□□□ -0.52
VIPAS39-203ENST00000448935 FAM86B2P0C5J1 330 aa11.8□□□□□ -0.52
VIPAS39-203ENST00000448935 SFPQP23246 707 aaKnown RBP eCLIP11.8□□□□□ -0.52
VIPAS39-203ENST00000448935 RPA1P27694 616 aa11.8□□□□□ -0.52
VIPAS39-203ENST00000448935 OAZ1P54368 228 aa11.8□□□□□ -0.52
VIPAS39-203ENST00000448935 STX17P56962 302 aa11.8□□□□□ -0.52
VIPAS39-203ENST00000448935 NOLC1Q14978 699 aaKnown RBP eCLIP11.8□□□□□ -0.52
VIPAS39-203ENST00000448935 VSTM4Q8IW00 320 aa11.8□□□□□ -0.52
VIPAS39-203ENST00000448935 RBM46Q8TBY0 533 aaKnown RBP11.8□□□□□ -0.52
VIPAS39-203ENST00000448935 CACTINQ8WUQ7 758 aaKnown RBP11.8□□□□□ -0.52
VIPAS39-203ENST00000448935 LENG9Q96B70 501 aa11.8□□□□□ -0.52
VIPAS39-203ENST00000448935 WDR11Q9BZH6 1224 aa11.8□□□□□ -0.52
VIPAS39-203ENST00000448935 CDHR5Q9HBB8 845 aa11.8□□□□□ -0.52
VIPAS39-203ENST00000448935 SAMSN1Q9NSI8 373 aaKnown RBP11.8□□□□□ -0.52
VIPAS39-203ENST00000448935 GDAQ9Y2T3 454 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms