RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ASGR1P07306 291 aa16■□□□□ 0.15
GTF3C3-206ENST00000448539 COL6A1P12109 1028 aa16■□□□□ 0.15
GTF3C3-206ENST00000448539 FDPSP14324 419 aaKnown RBP16■□□□□ 0.15
GTF3C3-206ENST00000448539 PTGS1P23219 599 aa16■□□□□ 0.15
GTF3C3-206ENST00000448539 SREBF1P36956 1147 aa16■□□□□ 0.15
GTF3C3-206ENST00000448539 ACLYP53396 1101 aa16■□□□□ 0.15
GTF3C3-206ENST00000448539 NKX3-2P78367 333 aa16■□□□□ 0.15
GTF3C3-206ENST00000448539 ST3GAL1Q11201 340 aa16■□□□□ 0.15
GTF3C3-206ENST00000448539 RASGRP4Q8TDF6 673 aa16■□□□□ 0.15
GTF3C3-206ENST00000448539 GPRASP2Q96D09 838 aa16■□□□□ 0.15
GTF3C3-206ENST00000448539 TMX3Q96JJ7 454 aa16■□□□□ 0.15
GTF3C3-206ENST00000448539 KCNJ14Q9UNX9 436 aa16■□□□□ 0.15
GTF3C3-206ENST00000448539 FRMPD3Q5JV73 1810 aa15.99■□□□□ 0.15
GTF3C3-206ENST00000448539 ICAM3P32942 547 aa15.99■□□□□ 0.15
GTF3C3-206ENST00000448539 ATN1P54259 1190 aaPredicted RBP15.99■□□□□ 0.15
GTF3C3-206ENST00000448539 IRX5P78411 483 aaPredicted RBP15.99■□□□□ 0.15
GTF3C3-206ENST00000448539 ARHGAP4P98171 946 aa15.99■□□□□ 0.15
GTF3C3-206ENST00000448539 MTMR1Q13613 665 aa15.99■□□□□ 0.15
GTF3C3-206ENST00000448539 LAMC2Q13753 1193 aa15.99■□□□□ 0.15
GTF3C3-206ENST00000448539 NEDD9Q14511 834 aa15.99■□□□□ 0.15
GTF3C3-206ENST00000448539 DAGLBQ8NCG7 672 aa15.99■□□□□ 0.15
GTF3C3-206ENST00000448539 GLT1D1Q96MS3 346 aa15.99■□□□□ 0.15
GTF3C3-206ENST00000448539 PHF20Q9BVI0 1012 aa15.99■□□□□ 0.15
GTF3C3-206ENST00000448539 MLXIPQ9HAP2 919 aa15.99■□□□□ 0.15
GTF3C3-206ENST00000448539 JADE2Q9NQC1 790 aa15.99■□□□□ 0.15
GTF3C3-206ENST00000448539 STARD7Q9NQZ5 370 aa15.99■□□□□ 0.15
GTF3C3-206ENST00000448539 COLQQ9Y215 455 aaPredicted RBP15.99■□□□□ 0.15
GTF3C3-206ENST00000448539 UBIAD1Q9Y5Z9 338 aa15.99■□□□□ 0.15
GTF3C3-206ENST00000448539 A0A1W2PQ45 241 aaPredicted RBP15.98■□□□□ 0.15
GTF3C3-206ENST00000448539 A0A1W2PQY0 241 aa15.98■□□□□ 0.15
GTF3C3-206ENST00000448539 SPATA31C2B4DYI2 1134 aa15.98■□□□□ 0.15
GTF3C3-206ENST00000448539 CTAGE5O15320 804 aa15.98■□□□□ 0.15
GTF3C3-206ENST00000448539 MAFGO15525 162 aa15.98■□□□□ 0.15
GTF3C3-206ENST00000448539 EVI5O60447 810 aa15.98■□□□□ 0.15
GTF3C3-206ENST00000448539 KPNA6O60684 536 aa15.98■□□□□ 0.15
GTF3C3-206ENST00000448539 CABYRO75952 493 aa15.98■□□□□ 0.15
GTF3C3-206ENST00000448539 GGPS1O95749 300 aa15.98■□□□□ 0.15
GTF3C3-206ENST00000448539 MYL3P08590 195 aa15.98■□□□□ 0.15
GTF3C3-206ENST00000448539 ITGB5P18084 799 aa15.98■□□□□ 0.15
GTF3C3-206ENST00000448539 UBA1P22314 1058 aaKnown RBP15.98■□□□□ 0.15
GTF3C3-206ENST00000448539 FOSBP53539 338 aa15.98■□□□□ 0.15
GTF3C3-206ENST00000448539 CCSAPQ6IQ19 270 aaPredicted RBP15.98■□□□□ 0.15
GTF3C3-206ENST00000448539 GIMAP8Q8ND71 665 aaPredicted RBP15.98■□□□□ 0.15
GTF3C3-206ENST00000448539 MXRA8Q9BRK3 442 aa15.98■□□□□ 0.15
GTF3C3-206ENST00000448539 POLR3EQ9NVU0 708 aa15.98■□□□□ 0.15
GTF3C3-206ENST00000448539 KIF3AQ9Y496 699 aa15.98■□□□□ 0.15
GTF3C3-206ENST00000448539 CCDC194A0A1B0GVG4 234 aa15.97■□□□□ 0.15
GTF3C3-206ENST00000448539 ADAMTS3O15072 1205 aa15.97■□□□□ 0.15
GTF3C3-206ENST00000448539 SORBS3O60504 671 aa15.97■□□□□ 0.15
GTF3C3-206ENST00000448539 CD2BP2O95400 341 aaKnown RBP15.97■□□□□ 0.15
GTF3C3-206ENST00000448539 KRT2P35908 639 aa15.97■□□□□ 0.15
GTF3C3-206ENST00000448539 ARHGAP1Q07960 439 aa15.97■□□□□ 0.15
GTF3C3-206ENST00000448539 CEP55Q53EZ4 464 aa15.97■□□□□ 0.15
GTF3C3-206ENST00000448539 CELF3Q5SZQ8 465 aaKnown RBP15.97■□□□□ 0.15
GTF3C3-206ENST00000448539 CXCL17Q6UXB2 119 aa15.97■□□□□ 0.15
GTF3C3-206ENST00000448539 SLC39A5Q6ZMH5 540 aa15.97■□□□□ 0.15
GTF3C3-206ENST00000448539 KRT25Q7Z3Z0 450 aa15.97■□□□□ 0.15
GTF3C3-206ENST00000448539 AFG1LQ8WV93 481 aa15.97■□□□□ 0.15
GTF3C3-206ENST00000448539 C8orf76Q96K31 380 aa15.97■□□□□ 0.15
GTF3C3-206ENST00000448539 SPATA33Q96N06 139 aa15.97■□□□□ 0.15
GTF3C3-206ENST00000448539 ELP1O95163 1332 aa15.96■□□□□ 0.15
GTF3C3-206ENST00000448539 A6NJR5 290 aa15.96■□□□□ 0.15
GTF3C3-206ENST00000448539 NOP56O00567 594 aaKnown RBP15.96■□□□□ 0.15
GTF3C3-206ENST00000448539 CYP3A4P08684 503 aa15.96■□□□□ 0.15
GTF3C3-206ENST00000448539 SP2Q02086 613 aa15.96■□□□□ 0.15
GTF3C3-206ENST00000448539 SEMA3FQ13275 785 aa15.96■□□□□ 0.15
GTF3C3-206ENST00000448539 NONOQ15233 471 aaKnown RBP eCLIP15.96■□□□□ 0.15
GTF3C3-206ENST00000448539 SAFBQ15424 915 aaKnown RBP eCLIP15.96■□□□□ 0.15
GTF3C3-206ENST00000448539 DGKDQ16760 1214 aa15.96■□□□□ 0.15
GTF3C3-206ENST00000448539 PPTC7Q8NI37 304 aa15.96■□□□□ 0.15
GTF3C3-206ENST00000448539 EMID1Q96A84 441 aaPredicted RBP15.96■□□□□ 0.15
GTF3C3-206ENST00000448539 SENP7Q9BQF6 1050 aa15.96■□□□□ 0.15
GTF3C3-206ENST00000448539 GJB4Q9NTQ9 266 aa15.96■□□□□ 0.15
GTF3C3-206ENST00000448539 NR2E3Q9Y5X4 410 aa15.96■□□□□ 0.15
GTF3C3-206ENST00000448539 A0A0U1RQG5 324 aaPredicted RBP15.95■□□□□ 0.14
GTF3C3-206ENST00000448539 MMP3P08254 477 aa15.95■□□□□ 0.14
GTF3C3-206ENST00000448539 USP11P51784 963 aa15.95■□□□□ 0.14
GTF3C3-206ENST00000448539 SETQ01105 290 aaPredicted RBP15.95■□□□□ 0.14
GTF3C3-206ENST00000448539 NPY5RQ15761 445 aa15.95■□□□□ 0.14
GTF3C3-206ENST00000448539 LRRC26Q2I0M4 334 aa15.95■□□□□ 0.14
GTF3C3-206ENST00000448539 MYSM1Q5VVJ2 828 aa15.95■□□□□ 0.14
GTF3C3-206ENST00000448539 KRT40Q6A162 431 aa15.95■□□□□ 0.14
GTF3C3-206ENST00000448539 METTL7BQ6UX53 244 aa15.95■□□□□ 0.14
GTF3C3-206ENST00000448539 CYFIP1Q7L576 1253 aa15.95■□□□□ 0.14
GTF3C3-206ENST00000448539 NIPA1Q7RTP0 329 aa15.95■□□□□ 0.14
GTF3C3-206ENST00000448539 PLA2G4DQ86XP0 818 aa15.95■□□□□ 0.14
GTF3C3-206ENST00000448539 TBCKQ8TEA7 893 aa15.95■□□□□ 0.14
GTF3C3-206ENST00000448539 SDF4Q9BRK5 362 aa15.95■□□□□ 0.14
GTF3C3-206ENST00000448539 MTG1Q9BT17 334 aaPredicted RBP15.95■□□□□ 0.14
GTF3C3-206ENST00000448539 KCNH7Q9NS40 1196 aa15.95■□□□□ 0.14
GTF3C3-206ENST00000448539 PKD2L1Q9P0L9 805 aa15.95■□□□□ 0.14
GTF3C3-206ENST00000448539 PCDH10Q9P2E7 1040 aa15.95■□□□□ 0.14
GTF3C3-206ENST00000448539 ATP11BQ9Y2G3 1177 aa15.95■□□□□ 0.14
GTF3C3-206ENST00000448539 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.95■□□□□ 0.14
GTF3C3-206ENST00000448539 KIAA1217Q5T5P2 1943 aa15.95■□□□□ 0.14
GTF3C3-206ENST00000448539 M0R2N6 131 aa15.94■□□□□ 0.14
GTF3C3-206ENST00000448539 MEIS1O00470 390 aa15.94■□□□□ 0.14
GTF3C3-206ENST00000448539 MMP1P03956 469 aa15.94■□□□□ 0.14
GTF3C3-206ENST00000448539 FXR1P51114 621 aaKnown RBP eCLIP15.94■□□□□ 0.14
GTF3C3-206ENST00000448539 RTP1P59025 263 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms