RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 FAM204AQ9H8W3 233 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 JPH1Q9HDC5 661 aaPredicted RBP4.71□□□□□ -1.66
PMS1-216ENST00000447734 C9orf78Q9NZ63 289 aaPredicted RBP4.71□□□□□ -1.66
PMS1-216ENST00000447734 CRIM1Q9NZV1 1036 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 PPP1R9AQ9ULJ8 1098 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 DNM3Q9UQ16 869 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 SF3B6Q9Y3B4 125 aaKnown RBP4.71□□□□□ -1.66
PMS1-216ENST00000447734 PCDHGA9Q9Y5G4 932 aaKnown RBP4.71□□□□□ -1.66
PMS1-216ENST00000447734 PCDHGA8Q9Y5G5 932 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 PCDHGA7Q9Y5G6 932 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 PCDHGA6Q9Y5G7 932 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 PCDHGA3Q9Y5H0 932 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 PCDHGA2Q9Y5H1 932 aa4.71□□□□□ -1.66
PMS1-216ENST00000447734 TRIM75PA6NK02 468 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 EXOC5O00471 708 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 TPP1O14773 563 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 MEFVO15553 781 aaPredicted RBP4.7□□□□□ -1.66
PMS1-216ENST00000447734 ZNF500O60304 480 aaPredicted RBP4.7□□□□□ -1.66
PMS1-216ENST00000447734 H2AFYO75367 372 aaKnown RBP4.7□□□□□ -1.66
PMS1-216ENST00000447734 VAMP4O75379 141 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 ZRANB2O95218 330 aaKnown RBP eCLIP4.7□□□□□ -1.665e-9■□□□□ 10.7
PMS1-216ENST00000447734 CKMP06732 381 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 LDHCP07864 332 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 H2AFB1P0C5Y9 115 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 H2AFB2P0C5Z0 115 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 ZKSCAN1P17029 563 aaPredicted RBP4.7□□□□□ -1.66
PMS1-216ENST00000447734 AKAP5P24588 427 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 CASP2P42575 452 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 RENBPP51606 427 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 ALDH5A1P51649 535 aaPredicted RBP4.7□□□□□ -1.66
PMS1-216ENST00000447734 PAK1Q13153 545 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 ZNF267Q14586 743 aaPredicted RBP4.7□□□□□ -1.66
PMS1-216ENST00000447734 GRIK5Q16478 980 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 PRRT3Q5FWE3 981 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 FAM47CQ5HY64 1035 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 DENND5AQ6IQ26 1287 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 ZNF280DQ6N043 979 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 MMS22LQ6ZRQ5 1243 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 UBE3DQ7Z6J8 389 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 FAM43AQ8N2R8 423 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 EFHBQ8N7U6 833 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 PDILTQ8N807 584 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 KREMEN2Q8NCW0 462 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.7□□□□□ -1.66
PMS1-216ENST00000447734 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.7□□□□□ -1.66
PMS1-216ENST00000447734 PPP1R13LQ8WUF5 828 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 ATXN2LQ8WWM7 1075 aaKnown RBP4.7□□□□□ -1.66
PMS1-216ENST00000447734 FANCD2OSQ96PS1 177 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 DSCC1Q9BVC3 393 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 FOXQ1Q9C009 403 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 CSRNP2Q9H175 543 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 PRDM10Q9NQV6 1147 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 DISC1Q9NRI5 854 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 OXSMQ9NWU1 459 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 H2AFY2Q9P0M6 372 aaPredicted RBP4.7□□□□□ -1.66
PMS1-216ENST00000447734 AP4E1Q9UPM8 1137 aa4.7□□□□□ -1.66
PMS1-216ENST00000447734 GOLGA8AA7E2F4 631 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 GOLGA8BA8MQT2 603 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 PRRT4C9JH25 899 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 RNGTTO60942 597 aaKnown RBP4.69□□□□□ -1.66
PMS1-216ENST00000447734 DLGAP3O95886 979 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 ZBED1O96006 694 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 FAM163BP0C2L3 166 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 MYBP10242 640 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 PTMSP20962 102 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 GRK2P25098 689 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 ECE1P42892 770 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 CCT5P48643 541 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 DNM2P50570 870 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 MECP2P51608 486 aaKnown RBP4.69□□□□□ -1.66
PMS1-216ENST00000447734 GEMIN4P57678 1058 aaKnown RBP4.69□□□□□ -1.66
PMS1-216ENST00000447734 CYP4F3Q08477 520 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 SIM2Q14190 667 aaPredicted RBP4.69□□□□□ -1.66
PMS1-216ENST00000447734 ADGRE1Q14246 886 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 TTLL4Q14679 1199 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 MBTPS1Q14703 1052 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 CCDC174Q6PII3 467 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 C20orf204Q6ZNR8 217 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 WFDC8Q8IUA0 241 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 CMIPQ8IY22 773 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 C2orf69Q8N8R5 385 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 ZBTB34Q8NCN2 500 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 PCDH19Q8TAB3 1148 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 VWCEQ96DN2 955 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 FAM193BQ96PV7 902 aaPredicted RBP4.69□□□□□ -1.66
PMS1-216ENST00000447734 PIDD1Q9HB75 910 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 SSU72Q9NP77 194 aaKnown RBP4.69□□□□□ -1.66
PMS1-216ENST00000447734 GPR27Q9NS67 375 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 GFOD1Q9NXC2 390 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 PRR13Q9NZ81 148 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 NRBP1Q9UHY1 535 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 RNF112Q9ULX5 631 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 CEP131Q9UPN4 1083 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 DGKBQ9Y6T7 804 aa4.69□□□□□ -1.66
PMS1-216ENST00000447734 CCDC66A2RUB6 948 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 A6NNZ2 444 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 STXBP3O00186 592 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 GSTA4O15217 222 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 DDX3YO15523 660 aaKnown RBP4.68□□□□□ -1.66
PMS1-216ENST00000447734 PQBP1O60828 265 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms