RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 PRR5P85299 388 aa6.28□□□□□ -1.4
HMGB1P48-201ENST00000446155 TMEM62Q0P6H9 643 aa6.28□□□□□ -1.4
HMGB1P48-201ENST00000446155 CYP4F22Q6NT55 531 aa6.28□□□□□ -1.4
HMGB1P48-201ENST00000446155 ZCCHC8Q6NZY4 707 aaKnown RBP6.28□□□□□ -1.4
HMGB1P48-201ENST00000446155 ZC3H7AQ8IWR0 971 aaKnown RBP6.28□□□□□ -1.4
HMGB1P48-201ENST00000446155 UHMK1Q8TAS1 419 aaKnown RBP6.28□□□□□ -1.4
HMGB1P48-201ENST00000446155 PIP4K2CQ8TBX8 421 aa6.28□□□□□ -1.4
HMGB1P48-201ENST00000446155 SH3RF2Q8TEC5 729 aa6.28□□□□□ -1.4
HMGB1P48-201ENST00000446155 KCNJ15Q99712 375 aa6.28□□□□□ -1.4
HMGB1P48-201ENST00000446155 ORAI3Q9BRQ5 295 aa6.28□□□□□ -1.4
HMGB1P48-201ENST00000446155 PDGFDQ9GZP0 370 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P48-201ENST00000446155 MCOLN1Q9GZU1 580 aa6.28□□□□□ -1.4
HMGB1P48-201ENST00000446155 EPB41L4BQ9H329 900 aa6.28□□□□□ -1.4
HMGB1P48-201ENST00000446155 KCNK12Q9HB15 430 aa6.28□□□□□ -1.4
HMGB1P48-201ENST00000446155 PLA2G2DQ9UNK4 145 aa6.28□□□□□ -1.4
HMGB1P48-201ENST00000446155 IRS2Q9Y4H2 1338 aa6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 LRRC10BA6NIK2 292 aa6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 B4E1Z4 1266 aa6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 ZNF561-AS1K7EIQ3 104 aa6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 HGSO14964 777 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 ZBTB7AO95365 584 aa6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 AMY2AP04746 511 aa6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 SRGAP2CP0DJJ0 459 aa6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 PYGMP11217 842 aa6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 COL6A2P12110 1019 aa6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 AMY2BP19961 511 aa6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 MECP2P51608 486 aaKnown RBP6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 MESP2Q0VG99 397 aa6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 SLC9A5Q14940 896 aa6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 MLANAQ16655 118 aa6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 STEAP3Q658P3 488 aa6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 ZC3H14Q6PJT7 736 aaKnown RBP6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 OVCH1Q7RTY7 1134 aa6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 ZNF605Q86T29 641 aa6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 LRRTM3Q86VH5 581 aa6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 DIRC2Q96SL1 478 aa6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 NUDT5Q9UKK9 219 aa6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 PALD1Q9ULE6 856 aa6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 COQ6Q9Y2Z9 468 aa6.27□□□□□ -1.41
HMGB1P48-201ENST00000446155 TCRBV5S2A0A599 114 aa6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 CCDC66A2RUB6 948 aa6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 OPA1O60313 960 aa6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 GLRX3O76003 335 aaKnown RBP6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 GNAT1P11488 350 aa6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 SPIRE1Q08AE8 756 aa6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 CHRNA2Q15822 529 aa6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 FAM47CQ5HY64 1035 aa6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 TMC6Q7Z403 805 aa6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 THNSL2Q86YJ6 484 aa6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 MIB1Q86YT6 1006 aa6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 IGSF22Q8N9C0 903 aa6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 PHOSPHO1Q8TCT1 267 aa6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 DDX1Q92499 740 aaKnown RBP6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 TARS2Q9BW92 718 aaKnown RBP6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 MTFR1LQ9H019 292 aa6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 AP5M1Q9H0R1 490 aa6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 SMOC1Q9H4F8 434 aa6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 CNTD2Q9H8S5 307 aa6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 SMURF1Q9HCE7 757 aa6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 GCM1Q9NP62 436 aa6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 DCP1AQ9NPI6 582 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 ASH2LQ9UBL3 628 aa6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 MBD1Q9UIS9 605 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P48-201ENST00000446155 TEX51A0A1B0GUA7 166 aa6.25□□□□□ -1.41
HMGB1P48-201ENST00000446155 VIL1P09327 827 aaKnown RBP6.25□□□□□ -1.41
HMGB1P48-201ENST00000446155 PDE6AP16499 860 aa6.25□□□□□ -1.41
HMGB1P48-201ENST00000446155 MASP1P48740 699 aa6.25□□□□□ -1.41
HMGB1P48-201ENST00000446155 EPHA5P54756 1037 aa6.25□□□□□ -1.41
HMGB1P48-201ENST00000446155 GPR19Q15760 415 aa6.25□□□□□ -1.41
HMGB1P48-201ENST00000446155 TMEM177Q53S58 311 aa6.25□□□□□ -1.41
HMGB1P48-201ENST00000446155 OLFML2BQ68BL8 750 aa6.25□□□□□ -1.41
HMGB1P48-201ENST00000446155 CDCA2Q69YH5 1023 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P48-201ENST00000446155 OTOP1Q7RTM1 612 aa6.25□□□□□ -1.41
HMGB1P48-201ENST00000446155 ANKLE2Q86XL3 938 aa6.25□□□□□ -1.41
HMGB1P48-201ENST00000446155 FBXO15Q8NCQ5 510 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P48-201ENST00000446155 FMNL2Q96PY5 1086 aa6.25□□□□□ -1.41
HMGB1P48-201ENST00000446155 SLKQ9H2G2 1235 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P48-201ENST00000446155 SRPK3Q9UPE1 567 aa6.25□□□□□ -1.41
HMGB1P48-201ENST00000446155 PRKAB1Q9Y478 270 aa6.25□□□□□ -1.41
HMGB1P48-201ENST00000446155 TELO2Q9Y4R8 837 aa6.25□□□□□ -1.41
HMGB1P48-201ENST00000446155 CBX4O00257 560 aa6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 KRIT1O00522 736 aa6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 MAN2B1O00754 1011 aa6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 GSTA4O15217 222 aa6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 SEMA7AO75326 666 aa6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 KRT1P04264 644 aa6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 JMJD7P0C870 316 aa6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 YBX3P16989 372 aaKnown RBP eCLIP6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 IGFBP6P24592 240 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 CDR1P51861 262 aa6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 JAM2P57087 298 aa6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 SRSF3P84103 164 aaKnown RBP6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 HHIPL2Q6UWX4 724 aa6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 ARHGAP36Q6ZRI8 547 aa6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 DDX53Q86TM3 631 aaKnown RBP6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 OSTM1Q86WC4 334 aa6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 TTLL11Q8NHH1 800 aa6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 PANK1Q8TE04 598 aa6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 GPATCH3Q96I76 525 aa6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 BCAS3Q9H6U6 928 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms