RNA–Protein interactions for RNA: ENST00000445237.2

HDAC7-214, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 364 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-214ENST00000445237 KCNV1Q6PIU1 500 aa20.59■□□□□ 0.89
HDAC7-214ENST00000445237 SRBD1Q8N5C6 995 aaKnown RBP20.59■□□□□ 0.89
HDAC7-214ENST00000445237 C7orf31Q8N865 590 aa20.59■□□□□ 0.89
HDAC7-214ENST00000445237 TMEM87BQ96K49 555 aa20.59■□□□□ 0.89
HDAC7-214ENST00000445237 FTOQ9C0B1 505 aaKnown RBP eCLIP20.59■□□□□ 0.89
HDAC7-214ENST00000445237 SLC28A3Q9HAS3 691 aa20.59■□□□□ 0.89
HDAC7-214ENST00000445237 GTF2IRD1Q9UHL9 959 aa20.59■□□□□ 0.89
HDAC7-214ENST00000445237 SCN5AQ14524 2016 aa20.59■□□□□ 0.89
HDAC7-214ENST00000445237 RFC2P35250 354 aa20.58■□□□□ 0.89
HDAC7-214ENST00000445237 MRPS9P82933 396 aaKnown RBP20.58■□□□□ 0.89
HDAC7-214ENST00000445237 KIAA0753Q2KHM9 967 aa20.58■□□□□ 0.89
HDAC7-214ENST00000445237 BMP2KLQ5H9B9 411 aa20.58■□□□□ 0.89
HDAC7-214ENST00000445237 USP17L6PQ6QN14 398 aa20.58■□□□□ 0.89
HDAC7-214ENST00000445237 CENPQQ7L2Z9 268 aaPredicted RBP20.58■□□□□ 0.89
HDAC7-214ENST00000445237 USP38Q8NB14 1042 aa20.58■□□□□ 0.89
HDAC7-214ENST00000445237 MTA3Q9BTC8 594 aa20.58■□□□□ 0.89
HDAC7-214ENST00000445237 RTEL1Q9NZ71 1219 aa20.58■□□□□ 0.89
HDAC7-214ENST00000445237 hCG_1642624A0A1W2PR95 340 aa20.57■□□□□ 0.88
HDAC7-214ENST00000445237 HAS3O00219 553 aa20.57■□□□□ 0.88
HDAC7-214ENST00000445237 PPFIA4O75335 1185 aa20.57■□□□□ 0.88
HDAC7-214ENST00000445237 ACTN1P12814 892 aa20.57■□□□□ 0.88
HDAC7-214ENST00000445237 HOXD8P13378 290 aaPredicted RBP20.57■□□□□ 0.88
HDAC7-214ENST00000445237 ZNF200P98182 395 aaPredicted RBP20.57■□□□□ 0.88
HDAC7-214ENST00000445237 TMTC2Q8N394 836 aa20.57■□□□□ 0.88
HDAC7-214ENST00000445237 LZTS2Q9BRK4 669 aa20.57■□□□□ 0.88
HDAC7-214ENST00000445237 KATNAL1Q9BW62 490 aa20.57■□□□□ 0.88
HDAC7-214ENST00000445237 COL25A1Q9BXS0 654 aaPredicted RBP20.57■□□□□ 0.88
HDAC7-214ENST00000445237 MLXIPQ9HAP2 919 aa20.57■□□□□ 0.88
HDAC7-214ENST00000445237 SEC63Q9UGP8 760 aaKnown RBP20.57■□□□□ 0.88
HDAC7-214ENST00000445237 FRMPD4Q14CM0 1322 aa20.56■□□□□ 0.88
HDAC7-214ENST00000445237 TGFB3P10600 412 aa20.56■□□□□ 0.88
HDAC7-214ENST00000445237 GNAQP50148 359 aa20.56■□□□□ 0.88
HDAC7-214ENST00000445237 ADGRE1Q14246 886 aa20.56■□□□□ 0.88
HDAC7-214ENST00000445237 HIC1Q14526 733 aa20.56■□□□□ 0.88
HDAC7-214ENST00000445237 GPNMBQ14956 572 aa20.56■□□□□ 0.88
HDAC7-214ENST00000445237 CCDC82Q8N4S0 544 aa20.56■□□□□ 0.88
HDAC7-214ENST00000445237 CCDC155Q8N6L0 562 aa20.56■□□□□ 0.88
HDAC7-214ENST00000445237 SMARCC2Q8TAQ2 1214 aa20.56■□□□□ 0.88
HDAC7-214ENST00000445237 CAGE1Q8TC20 777 aa20.56■□□□□ 0.88
HDAC7-214ENST00000445237 AFAP1L1Q8TED9 768 aa20.56■□□□□ 0.88
HDAC7-214ENST00000445237 PPM1EQ8WY54 764 aa20.56■□□□□ 0.88
HDAC7-214ENST00000445237 GAS2L1Q99501 681 aaPredicted RBP20.56■□□□□ 0.88
HDAC7-214ENST00000445237 PCDHA11Q9Y5I1 949 aa20.56■□□□□ 0.88
HDAC7-214ENST00000445237 CHD7Q9P2D1 2997 aa20.56■□□□□ 0.88
HDAC7-214ENST00000445237 MEIS2O14770 477 aa20.55■□□□□ 0.88
HDAC7-214ENST00000445237 SELPP16109 830 aa20.55■□□□□ 0.88
HDAC7-214ENST00000445237 SMARCA1P28370 1054 aa20.55■□□□□ 0.88
HDAC7-214ENST00000445237 LIFRP42702 1097 aa20.55■□□□□ 0.88
HDAC7-214ENST00000445237 SEMA3FQ13275 785 aa20.55■□□□□ 0.88
HDAC7-214ENST00000445237 PPP2R2DQ66LE6 453 aa20.55■□□□□ 0.88
HDAC7-214ENST00000445237 LRRC8DQ7L1W4 858 aa20.55■□□□□ 0.88
HDAC7-214ENST00000445237 WNT8BQ93098 351 aa20.55■□□□□ 0.88
HDAC7-214ENST00000445237 INPP4AQ96PE3 977 aaPredicted RBP20.55■□□□□ 0.88
HDAC7-214ENST00000445237 C16orf70Q9BSU1 422 aa20.55■□□□□ 0.88
HDAC7-214ENST00000445237 SLC12A7Q9Y666 1083 aa20.55■□□□□ 0.88
HDAC7-214ENST00000445237 GBF1Q92538 1859 aa20.55■□□□□ 0.88
HDAC7-214ENST00000445237 TANC1Q9C0D5 1861 aa20.54■□□□□ 0.88
HDAC7-214ENST00000445237 CALM1P0DP23 149 aa20.54■□□□□ 0.88
HDAC7-214ENST00000445237 CALM2P0DP24 149 aa20.54■□□□□ 0.88
HDAC7-214ENST00000445237 CALM3P0DP25 149 aa20.54■□□□□ 0.88
HDAC7-214ENST00000445237 CKBP12277 381 aa20.54■□□□□ 0.88
HDAC7-214ENST00000445237 GNPTABQ3T906 1256 aa20.54■□□□□ 0.88
HDAC7-214ENST00000445237 CUL5Q93034 780 aa20.54■□□□□ 0.88
HDAC7-214ENST00000445237 TCEANC2Q96MN5 208 aa20.54■□□□□ 0.88
HDAC7-214ENST00000445237 TELO2Q9Y4R8 837 aa20.54■□□□□ 0.88
HDAC7-214ENST00000445237 MYH7BA7E2Y1 1941 aa20.54■□□□□ 0.88
HDAC7-214ENST00000445237 SPATA31C2B4DYI2 1134 aa20.53■□□□□ 0.88
HDAC7-214ENST00000445237 IGFBP4P22692 258 aa20.53■□□□□ 0.88
HDAC7-214ENST00000445237 ICAM3P32942 547 aa20.53■□□□□ 0.88
HDAC7-214ENST00000445237 PTK7Q13308 1070 aa20.53■□□□□ 0.88
HDAC7-214ENST00000445237 CYFIP1Q7L576 1253 aa20.53■□□□□ 0.88
HDAC7-214ENST00000445237 MICU3Q86XE3 530 aa20.53■□□□□ 0.88
HDAC7-214ENST00000445237 FANCBQ8NB91 859 aa20.53■□□□□ 0.88
HDAC7-214ENST00000445237 PRDM6Q9NQX0 595 aa20.53■□□□□ 0.88
HDAC7-214ENST00000445237 PIK3CDO00329 1044 aa20.52■□□□□ 0.88
HDAC7-214ENST00000445237 FIBPO43427 364 aa20.52■□□□□ 0.88
HDAC7-214ENST00000445237 STAM2O75886 525 aa20.52■□□□□ 0.88
HDAC7-214ENST00000445237 CA3P07451 260 aa20.52■□□□□ 0.88
HDAC7-214ENST00000445237 RBL2Q08999 1139 aa20.52■□□□□ 0.88
HDAC7-214ENST00000445237 UBE2SQ16763 222 aa20.52■□□□□ 0.88
HDAC7-214ENST00000445237 TCTN1Q2MV58 587 aa20.52■□□□□ 0.88
HDAC7-214ENST00000445237 TRIM71Q2Q1W2 868 aaKnown RBP20.52■□□□□ 0.88
HDAC7-214ENST00000445237 PCNX4Q63HM2 1172 aa20.52■□□□□ 0.88
HDAC7-214ENST00000445237 TMTC3Q6ZXV5 915 aa20.52■□□□□ 0.88
HDAC7-214ENST00000445237 SLC9A7Q96T83 725 aa20.52■□□□□ 0.88
HDAC7-214ENST00000445237 PSTPIP2Q9H939 334 aa20.52■□□□□ 0.88
HDAC7-214ENST00000445237 VCANP13611 3396 aa20.51■□□□□ 0.87
HDAC7-214ENST00000445237 H3BRB1 525 aa20.51■□□□□ 0.87
HDAC7-214ENST00000445237 NOP56O00567 594 aaKnown RBP20.51■□□□□ 0.87
HDAC7-214ENST00000445237 NBNO60934 754 aa20.51■□□□□ 0.87
HDAC7-214ENST00000445237 LGALS2P05162 132 aa20.51■□□□□ 0.87
HDAC7-214ENST00000445237 SP4Q02446 784 aa20.51■□□□□ 0.87
HDAC7-214ENST00000445237 CCDC85BQ15834 202 aaPredicted RBP20.51■□□□□ 0.87
HDAC7-214ENST00000445237 ZNF618Q5T7W0 954 aa20.51■□□□□ 0.87
HDAC7-214ENST00000445237 RNF20Q5VTR2 975 aa20.51■□□□□ 0.87
HDAC7-214ENST00000445237 TRAF7Q6Q0C0 670 aa20.51■□□□□ 0.87
HDAC7-214ENST00000445237 TMCO2Q7Z6W1 182 aaPredicted RBP20.51■□□□□ 0.87
HDAC7-214ENST00000445237 SGMS1Q86VZ5 419 aa20.51■□□□□ 0.87
HDAC7-214ENST00000445237 HERC6Q8IVU3 1022 aa20.51■□□□□ 0.87
HDAC7-214ENST00000445237 RASEFQ8IZ41 740 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms