RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 EPB41L2O43491 1005 aaKnown RBP10.76□□□□□ -0.69
LINC00642-203ENST00000444942 GALR2O43603 387 aaPredicted RBP10.76□□□□□ -0.69
LINC00642-203ENST00000444942 PRC1O43663 620 aa10.76□□□□□ -0.69
LINC00642-203ENST00000444942 B4GALT4O60513 344 aa10.76□□□□□ -0.69
LINC00642-203ENST00000444942 CPA1P15085 419 aa10.76□□□□□ -0.69
LINC00642-203ENST00000444942 STAT3P40763 770 aa10.76□□□□□ -0.69
LINC00642-203ENST00000444942 ACAP1Q15027 740 aa10.76□□□□□ -0.69
LINC00642-203ENST00000444942 SEC23AQ15436 765 aa10.76□□□□□ -0.69
LINC00642-203ENST00000444942 CCDC178Q5BJE1 867 aa10.76□□□□□ -0.69
LINC00642-203ENST00000444942 SNRNP48Q6IEG0 339 aaKnown RBP10.76□□□□□ -0.69
LINC00642-203ENST00000444942 FAM160B2Q86V87 743 aa10.76□□□□□ -0.69
LINC00642-203ENST00000444942 MB21D1Q8N884 522 aa10.76□□□□□ -0.69
LINC00642-203ENST00000444942 TGS1Q96RS0 853 aaKnown RBP10.76□□□□□ -0.69
LINC00642-203ENST00000444942 MYL10Q9BUA6 226 aa10.76□□□□□ -0.69
LINC00642-203ENST00000444942 UBA5Q9GZZ9 404 aa10.76□□□□□ -0.69
LINC00642-203ENST00000444942 VAT1LQ9HCJ6 419 aa10.76□□□□□ -0.69
LINC00642-203ENST00000444942 PRR12Q9ULL5 1215 aa10.76□□□□□ -0.69
LINC00642-203ENST00000444942 SYNPO2Q9UMS6 1093 aa10.76□□□□□ -0.69
LINC00642-203ENST00000444942 RIPK3Q9Y572 518 aa10.76□□□□□ -0.69
LINC00642-203ENST00000444942 K7ELQ4 463 aaPredicted RBP10.75□□□□□ -0.69
LINC00642-203ENST00000444942 CTAGE5O15320 804 aa10.75□□□□□ -0.69
LINC00642-203ENST00000444942 ADCY6O43306 1168 aa10.75□□□□□ -0.69
LINC00642-203ENST00000444942 DHX16O60231 1041 aaKnown RBP10.75□□□□□ -0.69
LINC00642-203ENST00000444942 ZNF543Q08ER8 600 aa10.75□□□□□ -0.69
LINC00642-203ENST00000444942 SIGLEC14Q08ET2 396 aa10.75□□□□□ -0.69
LINC00642-203ENST00000444942 SART3Q15020 963 aaKnown RBP10.75□□□□□ -0.69
LINC00642-203ENST00000444942 NFKBIBQ15653 356 aa10.75□□□□□ -0.69
LINC00642-203ENST00000444942 NBPF20Q3BBV1 942 aa10.75□□□□□ -0.69
LINC00642-203ENST00000444942 SYDE2Q5VT97 1194 aa10.75□□□□□ -0.69
LINC00642-203ENST00000444942 NFXL1Q6ZNB6 911 aa10.75□□□□□ -0.69
LINC00642-203ENST00000444942 MSL3Q8N5Y2 521 aaKnown RBP10.75□□□□□ -0.69
LINC00642-203ENST00000444942 REPS2Q8NFH8 660 aa10.75□□□□□ -0.69
LINC00642-203ENST00000444942 NEK1Q96PY6 1258 aa10.75□□□□□ -0.69
LINC00642-203ENST00000444942 MMP19Q99542 508 aa10.75□□□□□ -0.69
LINC00642-203ENST00000444942 SEZ6LQ9BYH1 1024 aa10.75□□□□□ -0.69
LINC00642-203ENST00000444942 ZNF214Q9UL59 606 aaPredicted RBP10.75□□□□□ -0.69
LINC00642-203ENST00000444942 ADAMTS5Q9UNA0 930 aa10.75□□□□□ -0.69
LINC00642-203ENST00000444942 GRIN2DO15399 1336 aa10.74□□□□□ -0.69
LINC00642-203ENST00000444942 TRIP12Q14669 1992 aaPredicted RBP10.74□□□□□ -0.69
LINC00642-203ENST00000444942 SNAI1O95863 264 aaPredicted RBP10.74□□□□□ -0.69
LINC00642-203ENST00000444942 PARP1P09874 1014 aaKnown RBP10.74□□□□□ -0.69
LINC00642-203ENST00000444942 ALAS1P13196 640 aa10.74□□□□□ -0.69
LINC00642-203ENST00000444942 RXRAP19793 462 aa10.74□□□□□ -0.69
LINC00642-203ENST00000444942 MCM5P33992 734 aa10.74□□□□□ -0.69
LINC00642-203ENST00000444942 NKX3-2P78367 333 aa10.74□□□□□ -0.69
LINC00642-203ENST00000444942 ITGA7Q13683 1181 aa10.74□□□□□ -0.69
LINC00642-203ENST00000444942 PUM1Q14671 1186 aaKnown RBP eCLIP10.74□□□□□ -0.69
LINC00642-203ENST00000444942 RIOX2Q8IUF8 465 aa10.74□□□□□ -0.69
LINC00642-203ENST00000444942 CCDC144CPQ8IYA2 1237 aa10.74□□□□□ -0.69
LINC00642-203ENST00000444942 STAG2Q8N3U4 1231 aa10.74□□□□□ -0.69
LINC00642-203ENST00000444942 PIBF1Q8WXW3 757 aa10.74□□□□□ -0.69
LINC00642-203ENST00000444942 MRPL38Q96DV4 380 aaKnown RBP10.74□□□□□ -0.69
LINC00642-203ENST00000444942 ASIC4Q96FT7 647 aa10.74□□□□□ -0.69
LINC00642-203ENST00000444942 JAKMIP1Q96N16 626 aaKnown RBP10.74□□□□□ -0.69
LINC00642-203ENST00000444942 SLC38A10Q9HBR0 1119 aa10.74□□□□□ -0.69
LINC00642-203ENST00000444942 CHMP5Q9NZZ3 219 aa10.74□□□□□ -0.69
LINC00642-203ENST00000444942 NAP1L2Q9ULW6 460 aaPredicted RBP10.74□□□□□ -0.69
LINC00642-203ENST00000444942 SNX14Q9Y5W7 946 aa10.74□□□□□ -0.69
LINC00642-203ENST00000444942 NLRC5Q86WI3 1866 aa10.73□□□□□ -0.69
LINC00642-203ENST00000444942 CCDC69A6NI79 296 aa10.73□□□□□ -0.69
LINC00642-203ENST00000444942 CABYRO75952 493 aa10.73□□□□□ -0.69
LINC00642-203ENST00000444942 SLC25A27O95847 323 aa10.73□□□□□ -0.69
LINC00642-203ENST00000444942 HSP90AA1P07900 732 aaKnown RBP10.73□□□□□ -0.69
LINC00642-203ENST00000444942 HSPA4P34932 840 aa10.73□□□□□ -0.69
LINC00642-203ENST00000444942 RFC2P35250 354 aa10.73□□□□□ -0.69
LINC00642-203ENST00000444942 TIGD5Q53EQ6 642 aa10.73□□□□□ -0.69
LINC00642-203ENST00000444942 MCTP2Q6DN12 878 aa10.73□□□□□ -0.69
LINC00642-203ENST00000444942 CXCL17Q6UXB2 119 aa10.73□□□□□ -0.69
LINC00642-203ENST00000444942 EP400NLQ6ZTU2 488 aa10.73□□□□□ -0.69
LINC00642-203ENST00000444942 FRMD5Q7Z6J6 570 aa10.73□□□□□ -0.69
LINC00642-203ENST00000444942 SPRYD3Q8NCJ5 442 aa10.73□□□□□ -0.69
LINC00642-203ENST00000444942 IGDCC4Q8TDY8 1250 aa10.73□□□□□ -0.69
LINC00642-203ENST00000444942 TEX13BQ9BXU2 312 aa10.73□□□□□ -0.69
LINC00642-203ENST00000444942 LY9Q9HBG7 655 aa10.73□□□□□ -0.69
LINC00642-203ENST00000444942 ZHX1Q9UKY1 873 aaPredicted RBP10.73□□□□□ -0.69
LINC00642-203ENST00000444942 CCPG1Q9ULG6 757 aa10.73□□□□□ -0.69
LINC00642-203ENST00000444942 FRYLO94915 3013 aa10.73□□□□□ -0.69
LINC00642-203ENST00000444942 BAZ2BQ9UIF8 2168 aaKnown RBP10.72□□□□□ -0.69
LINC00642-203ENST00000444942 LINC01553A4QN01 128 aa10.72□□□□□ -0.69
LINC00642-203ENST00000444942 STXBP3O00186 592 aa10.72□□□□□ -0.69
LINC00642-203ENST00000444942 SH2B2O14492 632 aaPredicted RBP10.72□□□□□ -0.69
LINC00642-203ENST00000444942 MBTPS2O43462 519 aa10.72□□□□□ -0.69
LINC00642-203ENST00000444942 BAIAP3O94812 1187 aa10.72□□□□□ -0.69
LINC00642-203ENST00000444942 SNHG28P0DPA3 235 aa10.72□□□□□ -0.69
LINC00642-203ENST00000444942 LTBRP36941 435 aa10.72□□□□□ -0.69
LINC00642-203ENST00000444942 NT5C2P49902 561 aa10.72□□□□□ -0.69
LINC00642-203ENST00000444942 ANAPC15P60006 121 aa10.72□□□□□ -0.69
LINC00642-203ENST00000444942 FGD1P98174 961 aa10.72□□□□□ -0.69
LINC00642-203ENST00000444942 USH1GQ495M9 461 aa10.72□□□□□ -0.69
LINC00642-203ENST00000444942 ASPRV1Q53RT3 343 aa10.72□□□□□ -0.69
LINC00642-203ENST00000444942 MAMDC4Q6UXC1 1216 aa10.72□□□□□ -0.69
LINC00642-203ENST00000444942 CATIPQ7Z7H3 387 aa10.72□□□□□ -0.69
LINC00642-203ENST00000444942 ZNF654Q8IZM8 581 aa10.72□□□□□ -0.69
LINC00642-203ENST00000444942 RNF146Q9NTX7 359 aa10.72□□□□□ -0.69
LINC00642-203ENST00000444942 KLRF2D3W0D1 207 aa10.71□□□□□ -0.69
LINC00642-203ENST00000444942 PLA2G6O60733 806 aa10.71□□□□□ -0.69
LINC00642-203ENST00000444942 CASTP20810 708 aaKnown RBP10.71□□□□□ -0.69
LINC00642-203ENST00000444942 KCNJ6P48051 423 aa10.71□□□□□ -0.69
LINC00642-203ENST00000444942 BEX3Q00994 111 aa10.71□□□□□ -0.69
LINC00642-203ENST00000444942 ACVR2BQ13705 512 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms