RNA–Protein interactions for RNA: ENST00000443206.2

TOM1-208, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-208ENST00000443206 BARHL2Q9NY43 387 aa15.06■□□□□ 0
TOM1-208ENST00000443206 LAMA3Q16787 3333 aa15.05■□□□□ -0
TOM1-208ENST00000443206 SMCO2A6NFE2 343 aa15.05■□□□□ -0
TOM1-208ENST00000443206 STXBP3O00186 592 aa15.05■□□□□ -0
TOM1-208ENST00000443206 FIBPO43427 364 aa15.05■□□□□ -0
TOM1-208ENST00000443206 PPFIA4O75335 1185 aa15.05■□□□□ -0
TOM1-208ENST00000443206 UBA1P22314 1058 aaKnown RBP15.05■□□□□ -0
TOM1-208ENST00000443206 ICAM3P32942 547 aa15.05■□□□□ -0
TOM1-208ENST00000443206 ADCY7P51828 1080 aa15.05■□□□□ -0
TOM1-208ENST00000443206 EVCP57679 992 aa15.05■□□□□ -0
TOM1-208ENST00000443206 SP2Q02086 613 aa15.05■□□□□ -0
TOM1-208ENST00000443206 PTPN11Q06124 597 aaPredicted RBP15.05■□□□□ -0
TOM1-208ENST00000443206 NEDD9Q14511 834 aa15.05■□□□□ -0
TOM1-208ENST00000443206 SHHQ15465 462 aa15.05■□□□□ -0
TOM1-208ENST00000443206 KATNAL1Q9BW62 490 aa15.05■□□□□ -0
TOM1-208ENST00000443206 HIPK3Q9H422 1215 aa15.05■□□□□ -0
TOM1-208ENST00000443206 RIC8AQ9NPQ8 531 aa15.05■□□□□ -0
TOM1-208ENST00000443206 PCDHA6Q9UN73 950 aa15.05■□□□□ -0
TOM1-208ENST00000443206 PCDHA8Q9Y5H6 950 aa15.05■□□□□ -0
TOM1-208ENST00000443206 DOCK5Q9H7D0 1870 aa15.05■□□□□ -0
TOM1-208ENST00000443206 TRIP12Q14669 1992 aaPredicted RBP15.05■□□□□ -0
TOM1-208ENST00000443206 NID2Q14112 1375 aa15.04■□□□□ -0
TOM1-208ENST00000443206 SPATA31C2B4DYI2 1134 aa15.04■□□□□ -0
TOM1-208ENST00000443206 SOX1O00570 391 aaPredicted RBP15.04■□□□□ -0
TOM1-208ENST00000443206 PRPF3O43395 683 aaKnown RBP15.04■□□□□ -0
TOM1-208ENST00000443206 SORBS3O60504 671 aa15.04■□□□□ -0
TOM1-208ENST00000443206 FOSP01100 380 aaPredicted RBP15.04■□□□□ -0
TOM1-208ENST00000443206 SCG2P13521 617 aa15.04■□□□□ -0
TOM1-208ENST00000443206 PDIA3P30101 505 aaKnown RBP15.04■□□□□ -0
TOM1-208ENST00000443206 CCT2P78371 535 aaKnown RBP15.04■□□□□ -0
TOM1-208ENST00000443206 PPIGQ13427 754 aaKnown RBP eCLIP15.04■□□□□ -01e-7■□□□□ 10.5
TOM1-208ENST00000443206 TOB2Q14106 344 aaPredicted RBP15.04■□□□□ -0
TOM1-208ENST00000443206 PFKFB3Q16875 520 aaPredicted RBP15.04■□□□□ -0
TOM1-208ENST00000443206 HSDL1Q3SXM5 330 aa15.04■□□□□ -0
TOM1-208ENST00000443206 LRCH3Q96II8 777 aa15.04■□□□□ -0
TOM1-208ENST00000443206 CDHR1Q96JP9 859 aa15.04■□□□□ -0
TOM1-208ENST00000443206 UPF3BQ9BZI7 483 aaKnown RBP15.04■□□□□ -0
TOM1-208ENST00000443206 PDRG1Q9NUG6 133 aa15.04■□□□□ -0
TOM1-208ENST00000443206 TRMT13Q9NUP7 481 aaKnown RBP15.04■□□□□ -0
TOM1-208ENST00000443206 NOD1Q9Y239 953 aa15.04■□□□□ -0
TOM1-208ENST00000443206 LAMA2P24043 3122 aaKnown RBP15.04■□□□□ -0
TOM1-208ENST00000443206 KAT6AQ92794 2004 aa15.04■□□□□ -0
TOM1-208ENST00000443206 NOP56O00567 594 aaKnown RBP15.03■□□□□ -0
TOM1-208ENST00000443206 CYP2C18P33260 490 aa15.03■□□□□ -0
TOM1-208ENST00000443206 C9orf50Q5SZB4 431 aa15.03■□□□□ -0
TOM1-208ENST00000443206 TYW1BQ6NUM6 668 aa15.03■□□□□ -0
TOM1-208ENST00000443206 GIMAP8Q8ND71 665 aaPredicted RBP15.03■□□□□ -0
TOM1-208ENST00000443206 CCDC12Q8WUD4 166 aaPredicted RBP15.03■□□□□ -0
TOM1-208ENST00000443206 KAT2BQ92831 832 aa15.03■□□□□ -0
TOM1-208ENST00000443206 GPRASP2Q96D09 838 aa15.03■□□□□ -0
TOM1-208ENST00000443206 ZNF274Q96GC6 653 aaPredicted RBP15.03■□□□□ -0
TOM1-208ENST00000443206 SENP7Q9BQF6 1050 aa15.03■□□□□ -0
TOM1-208ENST00000443206 SZT2Q5T011 3432 aa15.02■□□□□ -0
TOM1-208ENST00000443206 MAFGO15525 162 aa15.02■□□□□ -0
TOM1-208ENST00000443206 CYP2C9P11712 490 aa15.02■□□□□ -0
TOM1-208ENST00000443206 CSF2RAP15509 400 aa15.02■□□□□ -0
TOM1-208ENST00000443206 IFNAR1P17181 557 aa15.02■□□□□ -0
TOM1-208ENST00000443206 PSEN2P49810 448 aa15.02■□□□□ -0
TOM1-208ENST00000443206 ANAPC15P60006 121 aa15.02■□□□□ -0
TOM1-208ENST00000443206 SEMA3FQ13275 785 aa15.02■□□□□ -0
TOM1-208ENST00000443206 GPR153Q6NV75 609 aa15.02■□□□□ -0
TOM1-208ENST00000443206 METTL7BQ6UX53 244 aa15.02■□□□□ -0
TOM1-208ENST00000443206 CYFIP1Q7L576 1253 aa15.02■□□□□ -0
TOM1-208ENST00000443206 C7orf31Q8N865 590 aa15.02■□□□□ -0
TOM1-208ENST00000443206 PPP1R13LQ8WUF5 828 aa15.02■□□□□ -0
TOM1-208ENST00000443206 PHKBQ93100 1093 aa15.02■□□□□ -0
TOM1-208ENST00000443206 ALG1Q9BT22 464 aa15.02■□□□□ -0
TOM1-208ENST00000443206 NOC4LQ9BVI4 516 aaKnown RBP15.02■□□□□ -0
TOM1-208ENST00000443206 SLC26A6Q9BXS9 759 aa15.02■□□□□ -0
TOM1-208ENST00000443206 RNF26Q9BY78 433 aaPredicted RBP15.02■□□□□ -0
TOM1-208ENST00000443206 CPLX1O14810 134 aa15.01□□□□□ -0.01
TOM1-208ENST00000443206 ZNF286BP0CG31 522 aa15.01□□□□□ -0.01
TOM1-208ENST00000443206 HOXD8P13378 290 aaPredicted RBP15.01□□□□□ -0.01
TOM1-208ENST00000443206 EPHB4P54760 987 aa15.01□□□□□ -0.01
TOM1-208ENST00000443206 CCL23P55773 120 aa15.01□□□□□ -0.01
TOM1-208ENST00000443206 AP3B2Q13367 1082 aa15.01□□□□□ -0.01
TOM1-208ENST00000443206 MTMR1Q13613 665 aa15.01□□□□□ -0.01
TOM1-208ENST00000443206 MFSD10Q14728 455 aa15.01□□□□□ -0.01
TOM1-208ENST00000443206 NTRK3Q16288 839 aa15.01□□□□□ -0.01
TOM1-208ENST00000443206 KIAA0753Q2KHM9 967 aa15.01□□□□□ -0.01
TOM1-208ENST00000443206 MCTP2Q6DN12 878 aa15.01□□□□□ -0.01
TOM1-208ENST00000443206 CPLX2Q6PUV4 134 aaKnown RBP15.01□□□□□ -0.01
TOM1-208ENST00000443206 SESTD1Q86VW0 696 aa15.01□□□□□ -0.01
TOM1-208ENST00000443206 TRIM22Q8IYM9 498 aa15.01□□□□□ -0.01
TOM1-208ENST00000443206 RNPC3Q96LT9 517 aaKnown RBP15.01□□□□□ -0.01
TOM1-208ENST00000443206 LARP6Q9BRS8 491 aaKnown RBP15.01□□□□□ -0.01
TOM1-208ENST00000443206 ANO3Q9BYT9 981 aa15.01□□□□□ -0.01
TOM1-208ENST00000443206 NCOA5Q9HCD5 579 aaKnown RBP15.01□□□□□ -0.01
TOM1-208ENST00000443206 C6orf50Q9HD87 102 aa15.01□□□□□ -0.01
TOM1-208ENST00000443206 UBIAD1Q9Y5Z9 338 aa15.01□□□□□ -0.01
TOM1-208ENST00000443206 UMODL1Q5DID0 1318 aa15□□□□□ -0.01
TOM1-208ENST00000443206 ESYT2A0FGR8 921 aa15□□□□□ -0.01
TOM1-208ENST00000443206 F2P00734 622 aa15□□□□□ -0.01
TOM1-208ENST00000443206 ITGB5P18084 799 aa15□□□□□ -0.01
TOM1-208ENST00000443206 GNA11P29992 359 aa15□□□□□ -0.01
TOM1-208ENST00000443206 SSRP1Q08945 709 aaKnown RBP15□□□□□ -0.01
TOM1-208ENST00000443206 BFSP2Q13515 415 aa15□□□□□ -0.01
TOM1-208ENST00000443206 PKN1Q16512 942 aa15□□□□□ -0.01
TOM1-208ENST00000443206 PTGISQ16647 500 aa15□□□□□ -0.01
TOM1-208ENST00000443206 RPUSD2Q8IZ73 545 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms