RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 BIN2Q9UBW5 565 aaPredicted RBP15.59■□□□□ 0.09
MCF2L-218ENST00000442625 SMCO2A6NFE2 343 aa15.58■□□□□ 0.08
MCF2L-218ENST00000442625 LSP1P33241 339 aa15.58■□□□□ 0.08
MCF2L-218ENST00000442625 CFAP58Q5T655 872 aa15.58■□□□□ 0.08
MCF2L-218ENST00000442625 ZSCAN29Q8IWY8 852 aaPredicted RBP15.58■□□□□ 0.08
MCF2L-218ENST00000442625 KLHL7Q8IXQ5 586 aa15.58■□□□□ 0.08
MCF2L-218ENST00000442625 ZNF444Q8N0Y2 327 aaPredicted RBP15.58■□□□□ 0.08
MCF2L-218ENST00000442625 ALS2CR12Q96Q35 445 aa15.58■□□□□ 0.08
MCF2L-218ENST00000442625 MMTAG2Q9BU76 263 aaKnown RBP15.58■□□□□ 0.08
MCF2L-218ENST00000442625 TMEM260Q9NX78 707 aa15.58■□□□□ 0.08
MCF2L-218ENST00000442625 DONSONQ9NYP3 566 aa15.58■□□□□ 0.08
MCF2L-218ENST00000442625 PALMO75781 387 aa15.58■□□□□ 0.08
MCF2L-218ENST00000442625 MYL1P05976 194 aa15.58■□□□□ 0.08
MCF2L-218ENST00000442625 HDLBPQ00341 1268 aaKnown RBP15.58■□□□□ 0.08
MCF2L-218ENST00000442625 SF3A3Q12874 501 aaKnown RBP eCLIP15.58■□□□□ 0.08
MCF2L-218ENST00000442625 LINC00116Q8NCU8 138 aa15.58■□□□□ 0.08
MCF2L-218ENST00000442625 CASKIN2Q8WXE0 1202 aa15.58■□□□□ 0.08
MCF2L-218ENST00000442625 GJA10Q969M2 543 aa15.58■□□□□ 0.08
MCF2L-218ENST00000442625 CCDC47Q96A33 483 aaKnown RBP15.58■□□□□ 0.08
MCF2L-218ENST00000442625 CD248Q9HCU0 757 aa15.58■□□□□ 0.08
MCF2L-218ENST00000442625 SRP68Q9UHB9 627 aaKnown RBP15.58■□□□□ 0.08
MCF2L-218ENST00000442625 SCN7AQ01118 1682 aa15.57■□□□□ 0.08
MCF2L-218ENST00000442625 TCP1P17987 556 aaKnown RBP15.57■□□□□ 0.08
MCF2L-218ENST00000442625 EMBQ6PCB8 327 aa15.57■□□□□ 0.08
MCF2L-218ENST00000442625 GBP6Q6ZN66 633 aa15.57■□□□□ 0.08
MCF2L-218ENST00000442625 DAGLBQ8NCG7 672 aa15.57■□□□□ 0.08
MCF2L-218ENST00000442625 TBCKQ8TEA7 893 aa15.57■□□□□ 0.08
MCF2L-218ENST00000442625 BAP1Q92560 729 aa15.57■□□□□ 0.08
MCF2L-218ENST00000442625 PACSIN1Q9BY11 444 aa15.57■□□□□ 0.08
MCF2L-218ENST00000442625 MPHOSPH10O00566 681 aaKnown RBP15.57■□□□□ 0.08
MCF2L-218ENST00000442625 GNAQP50148 359 aa15.57■□□□□ 0.08
MCF2L-218ENST00000442625 EHHADHQ08426 723 aa15.57■□□□□ 0.08
MCF2L-218ENST00000442625 MTA1Q13330 715 aa15.57■□□□□ 0.08
MCF2L-218ENST00000442625 NONOQ15233 471 aaKnown RBP eCLIP15.57■□□□□ 0.08
MCF2L-218ENST00000442625 NAA35Q5VZE5 725 aa15.57■□□□□ 0.08
MCF2L-218ENST00000442625 CACNA2D4Q7Z3S7 1137 aa15.57■□□□□ 0.08
MCF2L-218ENST00000442625 DDX42Q86XP3 938 aaKnown RBP eCLIP15.57■□□□□ 0.08
MCF2L-218ENST00000442625 FAM114A1Q8IWE2 563 aa15.57■□□□□ 0.08
MCF2L-218ENST00000442625 C7orf25Q9BPX7 421 aa15.57■□□□□ 0.08
MCF2L-218ENST00000442625 PPANQ9NQ55 473 aaKnown RBP15.57■□□□□ 0.08
MCF2L-218ENST00000442625 PALM3A6NDB9 673 aaPredicted RBP15.56■□□□□ 0.08
MCF2L-218ENST00000442625 MYMKA6NI61 221 aa15.56■□□□□ 0.08
MCF2L-218ENST00000442625 POLD1P28340 1107 aa15.56■□□□□ 0.08
MCF2L-218ENST00000442625 PRPHP41219 470 aa15.56■□□□□ 0.08
MCF2L-218ENST00000442625 SKOR1P84550 965 aa15.56■□□□□ 0.08
MCF2L-218ENST00000442625 ALS2CLQ60I27 953 aa15.56■□□□□ 0.08
MCF2L-218ENST00000442625 MAATS1Q7Z4T9 603 aa15.56■□□□□ 0.08
MCF2L-218ENST00000442625 IQCKQ8N0W5 287 aa15.56■□□□□ 0.08
MCF2L-218ENST00000442625 JPH2Q9BR39 696 aaPredicted RBP15.56■□□□□ 0.08
MCF2L-218ENST00000442625 UBA5Q9GZZ9 404 aa15.56■□□□□ 0.08
MCF2L-218ENST00000442625 TBC1D7Q9P0N9 293 aa15.56■□□□□ 0.08
MCF2L-218ENST00000442625 A0A1W2PQJ5 194 aa15.56■□□□□ 0.08
MCF2L-218ENST00000442625 FNTAP49354 379 aa15.56■□□□□ 0.08
MCF2L-218ENST00000442625 IFT88Q13099 833 aa15.56■□□□□ 0.08
MCF2L-218ENST00000442625 CLEC4GQ6UXB4 293 aa15.56■□□□□ 0.08
MCF2L-218ENST00000442625 NEK8Q86SG6 692 aa15.56■□□□□ 0.08
MCF2L-218ENST00000442625 CAVIN3Q969G5 261 aa15.56■□□□□ 0.08
MCF2L-218ENST00000442625 ITFG2Q969R8 447 aa15.56■□□□□ 0.08
MCF2L-218ENST00000442625 ZMYND12Q9H0C1 365 aa15.56■□□□□ 0.08
MCF2L-218ENST00000442625 LAD1O00515 517 aa15.55■□□□□ 0.08
MCF2L-218ENST00000442625 KIAA0754O94854 1291 aa15.55■□□□□ 0.08
MCF2L-218ENST00000442625 LDHBP07195 334 aaKnown RBP15.55■□□□□ 0.08
MCF2L-218ENST00000442625 NR1D1P20393 614 aa15.55■□□□□ 0.08
MCF2L-218ENST00000442625 KLRC1P26715 233 aa15.55■□□□□ 0.08
MCF2L-218ENST00000442625 CDK17Q00537 523 aa15.55■□□□□ 0.08
MCF2L-218ENST00000442625 ZNF572Q7Z3I7 529 aaPredicted RBP15.55■□□□□ 0.08
MCF2L-218ENST00000442625 ZNF473Q8WTR7 871 aaKnown RBP15.55■□□□□ 0.08
MCF2L-218ENST00000442625 NLRP3Q96P20 1036 aa15.55■□□□□ 0.08
MCF2L-218ENST00000442625 PIGSQ96S52 555 aa15.55■□□□□ 0.08
MCF2L-218ENST00000442625 NUDT12Q9BQG2 462 aa15.55■□□□□ 0.08
MCF2L-218ENST00000442625 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.55■□□□□ 0.08
MCF2L-218ENST00000442625 KIAA1551Q9HCM1 1747 aa15.55■□□□□ 0.08
MCF2L-218ENST00000442625 TLR2O60603 784 aa15.55■□□□□ 0.08
MCF2L-218ENST00000442625 EPB41P11171 864 aaKnown RBP15.55■□□□□ 0.08
MCF2L-218ENST00000442625 RASA1P20936 1047 aa15.55■□□□□ 0.08
MCF2L-218ENST00000442625 KCNMA1Q12791 1236 aa15.55■□□□□ 0.08
MCF2L-218ENST00000442625 CEP85LQ5SZL2 805 aa15.55■□□□□ 0.08
MCF2L-218ENST00000442625 HGSNATQ68CP4 663 aa15.55■□□□□ 0.08
MCF2L-218ENST00000442625 CNNM4Q6P4Q7 775 aa15.55■□□□□ 0.08
MCF2L-218ENST00000442625 NOX5Q96PH1 765 aa15.55■□□□□ 0.08
MCF2L-218ENST00000442625 POTEMA6NI47 508 aa15.54■□□□□ 0.08
MCF2L-218ENST00000442625 E7EVH7 732 aa15.54■□□□□ 0.08
MCF2L-218ENST00000442625 MEFVO15553 781 aaPredicted RBP15.54■□□□□ 0.08
MCF2L-218ENST00000442625 KIF1CO43896 1103 aaKnown RBP15.54■□□□□ 0.08
MCF2L-218ENST00000442625 SPRED3Q2MJR0 410 aa15.54■□□□□ 0.08
MCF2L-218ENST00000442625 CFAP221Q4G0U5 840 aa15.54■□□□□ 0.08
MCF2L-218ENST00000442625 CHADLQ6NUI6 762 aa15.54■□□□□ 0.08
MCF2L-218ENST00000442625 AK8Q96MA6 479 aa15.54■□□□□ 0.08
MCF2L-218ENST00000442625 CUEDC2Q9H467 287 aa15.54■□□□□ 0.08
MCF2L-218ENST00000442625 BLOC1S4Q9NUP1 217 aa15.54■□□□□ 0.08
MCF2L-218ENST00000442625 RAD51CO43502 376 aa15.54■□□□□ 0.08
MCF2L-218ENST00000442625 PRLRP16471 622 aa15.54■□□□□ 0.08
MCF2L-218ENST00000442625 HNRNPH3P31942 346 aaKnown RBP15.54■□□□□ 0.08
MCF2L-218ENST00000442625 GRB10Q13322 594 aa15.54■□□□□ 0.08
MCF2L-218ENST00000442625 FIGNQ5HY92 759 aa15.54■□□□□ 0.08
MCF2L-218ENST00000442625 CENPPQ6IPU0 288 aa15.54■□□□□ 0.08
MCF2L-218ENST00000442625 GALNT17Q6IS24 598 aa15.54■□□□□ 0.08
MCF2L-218ENST00000442625 SV2BQ7L1I2 683 aa15.54■□□□□ 0.08
MCF2L-218ENST00000442625 KRT25Q7Z3Z0 450 aa15.54■□□□□ 0.08
MCF2L-218ENST00000442625 KCNK18Q7Z418 384 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms