RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 NELFCDQ8IXH7 590 aa16.83■□□□□ 0.29
CPSF7-205ENST00000439958 BPIFA3Q9BQP9 254 aa16.83■□□□□ 0.29
CPSF7-205ENST00000439958 KBTBD4Q9NVX7 518 aa16.83■□□□□ 0.29
CPSF7-205ENST00000439958 TAB2Q9NYJ8 693 aa16.83■□□□□ 0.29
CPSF7-205ENST00000439958 COG2Q14746 738 aa16.83■□□□□ 0.28
CPSF7-205ENST00000439958 NT5DC1Q5TFE4 455 aa16.83■□□□□ 0.28
CPSF7-205ENST00000439958 ANKRD20A12PQ8NF67 263 aa16.83■□□□□ 0.28
CPSF7-205ENST00000439958 CACTINQ8WUQ7 758 aaKnown RBP16.83■□□□□ 0.28
CPSF7-205ENST00000439958 WDR18Q9BV38 432 aa16.83■□□□□ 0.28
CPSF7-205ENST00000439958 WDR11Q9BZH6 1224 aa16.83■□□□□ 0.28
CPSF7-205ENST00000439958 BLOC1S4Q9NUP1 217 aa16.83■□□□□ 0.28
CPSF7-205ENST00000439958 SYNPO2Q9UMS6 1093 aa16.83■□□□□ 0.28
CPSF7-205ENST00000439958 PSME4Q14997 1843 aa16.83■□□□□ 0.28
CPSF7-205ENST00000439958 BRCA1P38398 1863 aaKnown RBP16.83■□□□□ 0.28
CPSF7-205ENST00000439958 ZNF536O15090 1300 aa16.83■□□□□ 0.28
CPSF7-205ENST00000439958 PPP1R3GB7ZBB8 358 aa16.83■□□□□ 0.28
CPSF7-205ENST00000439958 IRF6O14896 467 aa16.83■□□□□ 0.28
CPSF7-205ENST00000439958 CBFA2T2O43439 604 aa16.83■□□□□ 0.28
CPSF7-205ENST00000439958 PSMC6P62333 389 aa16.83■□□□□ 0.28
CPSF7-205ENST00000439958 PDIA5Q14554 519 aa16.83■□□□□ 0.28
CPSF7-205ENST00000439958 HERC4Q5GLZ8 1057 aaPredicted RBP16.83■□□□□ 0.28
CPSF7-205ENST00000439958 MCF2L2Q86YR7 1114 aa16.83■□□□□ 0.28
CPSF7-205ENST00000439958 RAD54LQ92698 747 aa16.83■□□□□ 0.28
CPSF7-205ENST00000439958 MRFAP1L1Q96HT8 127 aa16.83■□□□□ 0.28
CPSF7-205ENST00000439958 PCMTD1Q96MG8 357 aaPredicted RBP16.83■□□□□ 0.28
CPSF7-205ENST00000439958 TRMT1Q9NXH9 659 aaKnown RBP16.83■□□□□ 0.28
CPSF7-205ENST00000439958 TRAF5O00463 557 aa16.82■□□□□ 0.28
CPSF7-205ENST00000439958 N4BP3O15049 544 aa16.82■□□□□ 0.28
CPSF7-205ENST00000439958 PLA2G4BP0C869 781 aa16.82■□□□□ 0.28
CPSF7-205ENST00000439958 PRKCSHP14314 528 aaPredicted RBP16.82■□□□□ 0.28
CPSF7-205ENST00000439958 TREML2Q5T2D2 321 aa16.82■□□□□ 0.28
CPSF7-205ENST00000439958 ENOX1Q8TC92 643 aaKnown RBP16.82■□□□□ 0.28
CPSF7-205ENST00000439958 CDCA5Q96FF9 252 aa16.82■□□□□ 0.28
CPSF7-205ENST00000439958 BHMT2Q9H2M3 363 aa16.82■□□□□ 0.28
CPSF7-205ENST00000439958 KCNF1Q9H3M0 494 aa16.82■□□□□ 0.28
CPSF7-205ENST00000439958 DNM3Q9UQ16 869 aa16.82■□□□□ 0.28
CPSF7-205ENST00000439958 MYH7BA7E2Y1 1941 aa16.82■□□□□ 0.28
CPSF7-205ENST00000439958 SFI1A8K8P3 1242 aa16.82■□□□□ 0.28
CPSF7-205ENST00000439958 SFPQP23246 707 aaKnown RBP eCLIP16.82■□□□□ 0.28
CPSF7-205ENST00000439958 SARM1Q6SZW1 724 aa16.82■□□□□ 0.28
CPSF7-205ENST00000439958 NCAPG2Q86XI2 1143 aa16.82■□□□□ 0.28
CPSF7-205ENST00000439958 MED15Q96RN5 788 aa16.82■□□□□ 0.28
CPSF7-205ENST00000439958 SRRTQ9BXP5 876 aaKnown RBP16.82■□□□□ 0.28
CPSF7-205ENST00000439958 MAGEC2Q9UBF1 373 aaPredicted RBP16.82■□□□□ 0.28
CPSF7-205ENST00000439958 ZBTB39O15060 712 aa16.82■□□□□ 0.28
CPSF7-205ENST00000439958 SPATA1Q5VX52 437 aa16.82■□□□□ 0.28
CPSF7-205ENST00000439958 CATSPER3Q86XQ3 398 aa16.82■□□□□ 0.28
CPSF7-205ENST00000439958 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.82■□□□□ 0.28
CPSF7-205ENST00000439958 IPO5O00410 1097 aaKnown RBP16.81■□□□□ 0.28
CPSF7-205ENST00000439958 EML1O00423 815 aa16.81■□□□□ 0.28
CPSF7-205ENST00000439958 ORC2Q13416 577 aaPredicted RBP16.81■□□□□ 0.28
CPSF7-205ENST00000439958 FILIP1LQ4L180 1135 aa16.81■□□□□ 0.28
CPSF7-205ENST00000439958 ANKRD35Q8N283 1001 aa16.81■□□□□ 0.28
CPSF7-205ENST00000439958 BANK1Q8NDB2 785 aa16.81■□□□□ 0.28
CPSF7-205ENST00000439958 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.81■□□□□ 0.28
CPSF7-205ENST00000439958 NT5C3AQ9H0P0 336 aa16.81■□□□□ 0.28
CPSF7-205ENST00000439958 KCNMB3Q9NPA1 279 aa16.81■□□□□ 0.28
CPSF7-205ENST00000439958 SKILP12757 684 aa16.81■□□□□ 0.28
CPSF7-205ENST00000439958 ERCC5P28715 1186 aaPredicted RBP16.81■□□□□ 0.28
CPSF7-205ENST00000439958 HS1BP3Q53T59 392 aa16.81■□□□□ 0.28
CPSF7-205ENST00000439958 CSGALNACT2Q8N6G5 542 aa16.81■□□□□ 0.28
CPSF7-205ENST00000439958 SPATA20Q8TB22 786 aa16.81■□□□□ 0.28
CPSF7-205ENST00000439958 NOC3LQ8WTT2 800 aaKnown RBP16.81■□□□□ 0.28
CPSF7-205ENST00000439958 HSD3B7Q9H2F3 369 aa16.81■□□□□ 0.28
CPSF7-205ENST00000439958 PMS1P54277 932 aaKnown RBP16.8■□□□□ 0.28
CPSF7-205ENST00000439958 EEPD1Q7L9B9 569 aa16.8■□□□□ 0.28
CPSF7-205ENST00000439958 GLIS3Q8NEA6 775 aa16.8■□□□□ 0.28
CPSF7-205ENST00000439958 ETNPPLQ8TBG4 499 aa16.8■□□□□ 0.28
CPSF7-205ENST00000439958 SYTL5Q8TDW5 730 aaPredicted RBP16.8■□□□□ 0.28
CPSF7-205ENST00000439958 STK17AQ9UEE5 414 aa16.8■□□□□ 0.28
CPSF7-205ENST00000439958 SNCAIPQ9Y6H5 919 aa16.8■□□□□ 0.28
CPSF7-205ENST00000439958 MCTP2Q6DN12 878 aa16.8■□□□□ 0.28
CPSF7-205ENST00000439958 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.8■□□□□ 0.28
CPSF7-205ENST00000439958 GPIHBP1Q8IV16 184 aa16.8■□□□□ 0.28
CPSF7-205ENST00000439958 LENG9Q96B70 501 aa16.8■□□□□ 0.28
CPSF7-205ENST00000439958 DYDC2Q96IM9 177 aa16.8■□□□□ 0.28
CPSF7-205ENST00000439958 EIF2AK1Q9BQI3 630 aaKnown RBP16.8■□□□□ 0.28
CPSF7-205ENST00000439958 CUEDC2Q9H467 287 aa16.8■□□□□ 0.28
CPSF7-205ENST00000439958 PANK4Q9NVE7 773 aa16.8■□□□□ 0.28
CPSF7-205ENST00000439958 GREB1LQ9C091 1923 aaPredicted RBP16.8■□□□□ 0.28
CPSF7-205ENST00000439958 KDM3AQ9Y4C1 1321 aa16.8■□□□□ 0.28
CPSF7-205ENST00000439958 ZNF592Q92610 1267 aa16.8■□□□□ 0.28
CPSF7-205ENST00000439958 MORC2Q9Y6X9 1032 aaPredicted RBP16.8■□□□□ 0.28
CPSF7-205ENST00000439958 C19orf81C9J6K1 198 aa16.79■□□□□ 0.28
CPSF7-205ENST00000439958 NRDCO43847 1150 aa16.79■□□□□ 0.28
CPSF7-205ENST00000439958 MTMR1Q13613 665 aa16.79■□□□□ 0.28
CPSF7-205ENST00000439958 TMEM132BQ14DG7 1078 aa16.79■□□□□ 0.28
CPSF7-205ENST00000439958 CNNM4Q6P4Q7 775 aa16.79■□□□□ 0.28
CPSF7-205ENST00000439958 ELOA2Q8IYF1 753 aaPredicted RBP16.79■□□□□ 0.28
CPSF7-205ENST00000439958 FAM20AQ96MK3 541 aa16.79■□□□□ 0.28
CPSF7-205ENST00000439958 TEX33O43247 280 aa16.79■□□□□ 0.28
CPSF7-205ENST00000439958 CLEC4DQ8WXI8 215 aa16.79■□□□□ 0.28
CPSF7-205ENST00000439958 KCNH7Q9NS40 1196 aa16.79■□□□□ 0.28
CPSF7-205ENST00000439958 PPP2R3BQ9Y5P8 575 aa16.79■□□□□ 0.28
CPSF7-205ENST00000439958 PIK3CDO00329 1044 aa16.79■□□□□ 0.28
CPSF7-205ENST00000439958 ITGB5P18084 799 aa16.79■□□□□ 0.28
CPSF7-205ENST00000439958 ADKP55263 362 aaKnown RBP16.79■□□□□ 0.28
CPSF7-205ENST00000439958 MTIF2P46199 727 aaKnown RBP16.78■□□□□ 0.28
CPSF7-205ENST00000439958 TEKT3Q9BXF9 490 aa16.78■□□□□ 0.28
CPSF7-205ENST00000439958 TEX13BQ9BXU2 312 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms