RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 ALG1Q9BT22 464 aa21.66■■□□□ 1.06
CCDC78-204ENST00000439619 PSTPIP2Q9H939 334 aa21.66■■□□□ 1.06
CCDC78-204ENST00000439619 SLC28A3Q9HAS3 691 aa21.66■■□□□ 1.06
CCDC78-204ENST00000439619 CXXC1Q9P0U4 656 aaPredicted RBP21.66■■□□□ 1.06
CCDC78-204ENST00000439619 GTF2IRD1Q9UHL9 959 aa21.66■■□□□ 1.06
CCDC78-204ENST00000439619 GRXCR1A8MXD5 290 aa21.65■■□□□ 1.06
CCDC78-204ENST00000439619 FIBPO43427 364 aa21.65■■□□□ 1.06
CCDC78-204ENST00000439619 HMGB1P09429 215 aaKnown RBP21.65■■□□□ 1.06
CCDC78-204ENST00000439619 ZNF286BP0CG31 522 aa21.65■■□□□ 1.06
CCDC78-204ENST00000439619 RXRAP19793 462 aa21.65■■□□□ 1.06
CCDC78-204ENST00000439619 FGD1P98174 961 aa21.65■■□□□ 1.06
CCDC78-204ENST00000439619 GDF6Q6KF10 455 aaPredicted RBP21.65■■□□□ 1.06
CCDC78-204ENST00000439619 NLRX1Q86UT6 975 aa21.65■■□□□ 1.06
CCDC78-204ENST00000439619 MICU3Q86XE3 530 aa21.65■■□□□ 1.06
CCDC78-204ENST00000439619 GAS2L1Q99501 681 aaPredicted RBP21.65■■□□□ 1.06
CCDC78-204ENST00000439619 LRRC2Q9BYS8 371 aa21.65■■□□□ 1.06
CCDC78-204ENST00000439619 RBM28Q9NW13 759 aaKnown RBP21.65■■□□□ 1.06
CCDC78-204ENST00000439619 LAMA2P24043 3122 aaKnown RBP21.65■■□□□ 1.06
CCDC78-204ENST00000439619 FRMPD4Q14CM0 1322 aa21.64■■□□□ 1.05
CCDC78-204ENST00000439619 SORBS3O60504 671 aa21.64■■□□□ 1.05
CCDC78-204ENST00000439619 HOXD8P13378 290 aaPredicted RBP21.64■■□□□ 1.05
CCDC78-204ENST00000439619 ATP2A2P16615 1042 aaKnown RBP21.64■■□□□ 1.05
CCDC78-204ENST00000439619 GRIN2CQ14957 1233 aa21.64■■□□□ 1.05
CCDC78-204ENST00000439619 HSDL1Q3SXM5 330 aa21.64■■□□□ 1.05
CCDC78-204ENST00000439619 PCNX4Q63HM2 1172 aa21.64■■□□□ 1.05
CCDC78-204ENST00000439619 USP17L6PQ6QN14 398 aa21.64■■□□□ 1.05
CCDC78-204ENST00000439619 DHX32Q7L7V1 743 aaKnown RBP21.64■■□□□ 1.05
CCDC78-204ENST00000439619 INPP4AQ96PE3 977 aaPredicted RBP21.64■■□□□ 1.05
CCDC78-204ENST00000439619 HDAC6Q9UBN7 1215 aa21.64■■□□□ 1.05
CCDC78-204ENST00000439619 MYH6P13533 1939 aa21.64■■□□□ 1.05
CCDC78-204ENST00000439619 SPDYE3A6NKU9 549 aa21.63■■□□□ 1.05
CCDC78-204ENST00000439619 SELPP16109 830 aa21.63■■□□□ 1.05
CCDC78-204ENST00000439619 ICAM3P32942 547 aa21.63■■□□□ 1.05
CCDC78-204ENST00000439619 PBX2P40425 430 aa21.63■■□□□ 1.05
CCDC78-204ENST00000439619 SP2Q02086 613 aa21.63■■□□□ 1.05
CCDC78-204ENST00000439619 TSGA10IPQ3SY00 556 aa21.63■■□□□ 1.05
CCDC78-204ENST00000439619 TMTC3Q6ZXV5 915 aa21.63■■□□□ 1.05
CCDC78-204ENST00000439619 SKAP1Q86WV1 359 aa21.63■■□□□ 1.05
CCDC78-204ENST00000439619 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.63■■□□□ 1.05
CCDC78-204ENST00000439619 CMTR1Q8N1G2 835 aaKnown RBP21.63■■□□□ 1.05
CCDC78-204ENST00000439619 CCDC82Q8N4S0 544 aa21.63■■□□□ 1.05
CCDC78-204ENST00000439619 GIMAP8Q8ND71 665 aaPredicted RBP21.63■■□□□ 1.05
CCDC78-204ENST00000439619 ZFP91Q96JP5 570 aaPredicted RBP21.63■■□□□ 1.05
CCDC78-204ENST00000439619 CDHR1Q96JP9 859 aa21.63■■□□□ 1.05
CCDC78-204ENST00000439619 EHMT1Q9H9B1 1298 aa21.63■■□□□ 1.05
CCDC78-204ENST00000439619 RTEL1Q9NZ71 1219 aa21.63■■□□□ 1.05
CCDC78-204ENST00000439619 SCN10AQ9Y5Y9 1956 aa21.62■■□□□ 1.05
CCDC78-204ENST00000439619 SPATA31C2B4DYI2 1134 aa21.62■■□□□ 1.05
CCDC78-204ENST00000439619 HAS3O00219 553 aa21.62■■□□□ 1.05
CCDC78-204ENST00000439619 DLL1O00548 723 aa21.62■■□□□ 1.05
CCDC78-204ENST00000439619 ZBTB43O43298 467 aa21.62■■□□□ 1.05
CCDC78-204ENST00000439619 MRPS9P82933 396 aaKnown RBP21.62■■□□□ 1.05
CCDC78-204ENST00000439619 PTK7Q13308 1070 aa21.62■■□□□ 1.05
CCDC78-204ENST00000439619 METTL7BQ6UX53 244 aa21.62■■□□□ 1.05
CCDC78-204ENST00000439619 HEATR3Q7Z4Q2 680 aa21.62■■□□□ 1.05
CCDC78-204ENST00000439619 RAB11FIP4Q86YS3 637 aa21.62■■□□□ 1.05
CCDC78-204ENST00000439619 SLC9A7Q96T83 725 aa21.62■■□□□ 1.05
CCDC78-204ENST00000439619 USP26Q9BXU7 913 aa21.62■■□□□ 1.05
CCDC78-204ENST00000439619 PCDHA11Q9Y5I1 949 aa21.62■■□□□ 1.05
CCDC78-204ENST00000439619 MEIS2O14770 477 aa21.61■■□□□ 1.05
CCDC78-204ENST00000439619 BAIAP3O94812 1187 aa21.61■■□□□ 1.05
CCDC78-204ENST00000439619 APOA5Q6Q788 366 aa21.61■■□□□ 1.05
CCDC78-204ENST00000439619 LRRC8DQ7L1W4 858 aa21.61■■□□□ 1.05
CCDC78-204ENST00000439619 TEX2Q8IWB9 1127 aa21.61■■□□□ 1.05
CCDC78-204ENST00000439619 PHOSPHO2Q8TCD6 241 aa21.61■■□□□ 1.05
CCDC78-204ENST00000439619 COL6A3P12111 3177 aa21.6■■□□□ 1.05
CCDC78-204ENST00000439619 KIF28PB7ZC32 967 aa21.6■■□□□ 1.05
CCDC78-204ENST00000439619 H3BRB1 525 aa21.6■■□□□ 1.05
CCDC78-204ENST00000439619 NEFLP07196 543 aa21.6■■□□□ 1.05
CCDC78-204ENST00000439619 KCNJ6P48051 423 aa21.6■■□□□ 1.05
CCDC78-204ENST00000439619 RTN1Q16799 776 aa21.6■■□□□ 1.05
CCDC78-204ENST00000439619 CYFIP1Q7L576 1253 aa21.6■■□□□ 1.05
CCDC78-204ENST00000439619 SENP7Q9BQF6 1050 aa21.6■■□□□ 1.05
CCDC78-204ENST00000439619 NKX2-4Q9H2Z4 354 aa21.6■■□□□ 1.05
CCDC78-204ENST00000439619 TUT1Q9H6E5 874 aaKnown RBP21.6■■□□□ 1.05
CCDC78-204ENST00000439619 ZNF215Q9UL58 517 aaPredicted RBP21.6■■□□□ 1.05
CCDC78-204ENST00000439619 GNAT1P11488 350 aa21.59■■□□□ 1.05
CCDC78-204ENST00000439619 CKBP12277 381 aa21.59■■□□□ 1.05
CCDC78-204ENST00000439619 EXOSC10Q01780 885 aaKnown RBP21.59■■□□□ 1.05
CCDC78-204ENST00000439619 RBL2Q08999 1139 aa21.59■■□□□ 1.05
CCDC78-204ENST00000439619 PPP2R2DQ66LE6 453 aa21.59■■□□□ 1.05
CCDC78-204ENST00000439619 GPKOWQ92917 476 aaPredicted RBP eCLIP21.59■■□□□ 1.05
CCDC78-204ENST00000439619 GPRASP2Q96D09 838 aa21.59■■□□□ 1.05
CCDC78-204ENST00000439619 C16orf70Q9BSU1 422 aa21.59■■□□□ 1.05
CCDC78-204ENST00000439619 NAP1L2Q9ULW6 460 aaPredicted RBP21.59■■□□□ 1.05
CCDC78-204ENST00000439619 CCDC196A0A1B0GTZ2 297 aa21.58■■□□□ 1.05
CCDC78-204ENST00000439619 hCG_1642624A0A1W2PR95 340 aa21.58■■□□□ 1.05
CCDC78-204ENST00000439619 C17orf102A2RUQ5 167 aa21.58■■□□□ 1.05
CCDC78-204ENST00000439619 hCG_1984214I3L0E3 225 aa21.58■■□□□ 1.05
CCDC78-204ENST00000439619 LGALS2P05162 132 aa21.58■■□□□ 1.05
CCDC78-204ENST00000439619 RCAN1P53805 252 aa21.58■■□□□ 1.05
CCDC78-204ENST00000439619 ZNF713Q8N859 430 aaPredicted RBP21.58■■□□□ 1.05
CCDC78-204ENST00000439619 KIAA1217Q5T5P2 1943 aa21.58■■□□□ 1.04
CCDC78-204ENST00000439619 KLF18A0A0U1RQI7 1052 aa21.57■■□□□ 1.04
CCDC78-204ENST00000439619 GOLGA8AA7E2F4 631 aa21.57■■□□□ 1.04
CCDC78-204ENST00000439619 GOLGA8BA8MQT2 603 aa21.57■■□□□ 1.04
CCDC78-204ENST00000439619 MAFGO15525 162 aa21.57■■□□□ 1.04
CCDC78-204ENST00000439619 EFCAB14O75071 495 aa21.57■■□□□ 1.04
CCDC78-204ENST00000439619 REC8O95072 547 aa21.57■■□□□ 1.04
CCDC78-204ENST00000439619 RABGGTBP53611 331 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms