RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 KIF28PB7ZC32 967 aa13.28□□□□□ -0.28
IRF1-204ENST00000439555 GCOM1H8Y6P7 765 aaPredicted RBP13.28□□□□□ -0.28
IRF1-204ENST00000439555 PITPNM1O00562 1244 aa13.28□□□□□ -0.28
IRF1-204ENST00000439555 CA3P07451 260 aa13.28□□□□□ -0.28
IRF1-204ENST00000439555 POLR2MP0CAP2 368 aa13.28□□□□□ -0.28
IRF1-204ENST00000439555 ACTN1P12814 892 aa13.28□□□□□ -0.28
IRF1-204ENST00000439555 EIF2AK2P19525 551 aaKnown RBP13.28□□□□□ -0.28
IRF1-204ENST00000439555 CASTP20810 708 aaKnown RBP13.28□□□□□ -0.28
IRF1-204ENST00000439555 MCM5P33992 734 aa13.28□□□□□ -0.28
IRF1-204ENST00000439555 RFC2P35250 354 aa13.28□□□□□ -0.28
IRF1-204ENST00000439555 LIFRP42702 1097 aa13.28□□□□□ -0.28
IRF1-204ENST00000439555 GNAQP50148 359 aa13.28□□□□□ -0.28
IRF1-204ENST00000439555 LAMC2Q13753 1193 aa13.28□□□□□ -0.28
IRF1-204ENST00000439555 NECTIN1Q15223 517 aa13.28□□□□□ -0.28
IRF1-204ENST00000439555 DGKDQ16760 1214 aa13.28□□□□□ -0.28
IRF1-204ENST00000439555 CASC1Q6TDU7 716 aa13.28□□□□□ -0.28
IRF1-204ENST00000439555 CHST3Q7LGC8 479 aa13.28□□□□□ -0.28
IRF1-204ENST00000439555 AFG1LQ8WV93 481 aa13.28□□□□□ -0.28
IRF1-204ENST00000439555 LY9Q9HBG7 655 aa13.28□□□□□ -0.28
IRF1-204ENST00000439555 TANC1Q9C0D5 1861 aa13.27□□□□□ -0.28
IRF1-204ENST00000439555 SCN10AQ9Y5Y9 1956 aa13.27□□□□□ -0.28
IRF1-204ENST00000439555 ZBBXA8MT70 800 aa13.27□□□□□ -0.29
IRF1-204ENST00000439555 RFXAPO00287 272 aa13.27□□□□□ -0.29
IRF1-204ENST00000439555 SLC27A2O14975 620 aa13.27□□□□□ -0.29
IRF1-204ENST00000439555 PRC1O43663 620 aa13.27□□□□□ -0.29
IRF1-204ENST00000439555 STAM2O75886 525 aa13.27□□□□□ -0.29
IRF1-204ENST00000439555 MMP3P08254 477 aa13.27□□□□□ -0.29
IRF1-204ENST00000439555 HOXD8P13378 290 aaPredicted RBP13.27□□□□□ -0.29
IRF1-204ENST00000439555 LY6KQ17RY6 165 aa13.27□□□□□ -0.29
IRF1-204ENST00000439555 HOMER1Q86YM7 354 aa13.27□□□□□ -0.29
IRF1-204ENST00000439555 ZNF654Q8IZM8 581 aa13.27□□□□□ -0.29
IRF1-204ENST00000439555 PPTC7Q8NI37 304 aa13.27□□□□□ -0.29
IRF1-204ENST00000439555 CTCFLQ8NI51 663 aaPredicted RBP13.27□□□□□ -0.29
IRF1-204ENST00000439555 KHSRPQ92945 711 aaKnown RBP eCLIP13.27□□□□□ -0.29
IRF1-204ENST00000439555 TRMT13Q9NUP7 481 aaKnown RBP13.27□□□□□ -0.29
IRF1-204ENST00000439555 MRVI1Q9Y6F6 885 aa13.27□□□□□ -0.29
IRF1-204ENST00000439555 SIP14410 1827 aa13.27□□□□□ -0.29
IRF1-204ENST00000439555 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.26□□□□□ -0.29
IRF1-204ENST00000439555 PPFIA4O75335 1185 aa13.26□□□□□ -0.29
IRF1-204ENST00000439555 LCTP09848 1927 aa13.26□□□□□ -0.29
IRF1-204ENST00000439555 CALM1P0DP23 149 aa13.26□□□□□ -0.29
IRF1-204ENST00000439555 CALM2P0DP24 149 aa13.26□□□□□ -0.29
IRF1-204ENST00000439555 CALM3P0DP25 149 aa13.26□□□□□ -0.29
IRF1-204ENST00000439555 CYP2C9P11712 490 aa13.26□□□□□ -0.29
IRF1-204ENST00000439555 TAP1Q03518 808 aa13.26□□□□□ -0.29
IRF1-204ENST00000439555 BFSP2Q13515 415 aa13.26□□□□□ -0.29
IRF1-204ENST00000439555 PGM5Q15124 567 aa13.26□□□□□ -0.29
IRF1-204ENST00000439555 FAM47CQ5HY64 1035 aa13.26□□□□□ -0.29
IRF1-204ENST00000439555 RNF20Q5VTR2 975 aa13.26□□□□□ -0.29
IRF1-204ENST00000439555 CREB3L3Q68CJ9 461 aa13.26□□□□□ -0.29
IRF1-204ENST00000439555 RRP36Q96EU6 259 aaKnown RBP13.26□□□□□ -0.29
IRF1-204ENST00000439555 KATNAL1Q9BW62 490 aa13.26□□□□□ -0.29
IRF1-204ENST00000439555 COL4A4P53420 1690 aaPredicted RBP13.25□□□□□ -0.29
IRF1-204ENST00000439555 FRMPD4Q14CM0 1322 aa13.25□□□□□ -0.29
IRF1-204ENST00000439555 PIK3CDO00329 1044 aa13.25□□□□□ -0.29
IRF1-204ENST00000439555 SH2B2O14492 632 aaPredicted RBP13.25□□□□□ -0.29
IRF1-204ENST00000439555 LPXNO60711 386 aa13.25□□□□□ -0.29
IRF1-204ENST00000439555 RGS20O76081 388 aa13.25□□□□□ -0.29
IRF1-204ENST00000439555 ALADP13716 330 aa13.25□□□□□ -0.29
IRF1-204ENST00000439555 CCND2P30279 289 aa13.25□□□□□ -0.29
IRF1-204ENST00000439555 HOXA13P31271 388 aaPredicted RBP13.25□□□□□ -0.29
IRF1-204ENST00000439555 CELF3Q5SZQ8 465 aaKnown RBP13.25□□□□□ -0.29
IRF1-204ENST00000439555 MYSM1Q5VVJ2 828 aa13.25□□□□□ -0.29
IRF1-204ENST00000439555 XRRA1Q6P2D8 792 aa13.25□□□□□ -0.29
IRF1-204ENST00000439555 SGMS1Q86VZ5 419 aa13.25□□□□□ -0.29
IRF1-204ENST00000439555 DHX37Q8IY37 1157 aaKnown RBP13.25□□□□□ -0.29
IRF1-204ENST00000439555 RETREG2Q8NC44 543 aa13.25□□□□□ -0.29
IRF1-204ENST00000439555 CAGE1Q8TC20 777 aa13.25□□□□□ -0.29
IRF1-204ENST00000439555 KAT2BQ92831 832 aa13.25□□□□□ -0.29
IRF1-204ENST00000439555 SCLYQ96I15 445 aa13.25□□□□□ -0.29
IRF1-204ENST00000439555 ANO2Q9NQ90 1003 aa13.25□□□□□ -0.29
IRF1-204ENST00000439555 EPOPA6NHQ4 379 aa13.24□□□□□ -0.29
IRF1-204ENST00000439555 CCDC69A6NI79 296 aa13.24□□□□□ -0.29
IRF1-204ENST00000439555 HAS3O00219 553 aa13.24□□□□□ -0.29
IRF1-204ENST00000439555 PARNO95453 639 aaKnown RBP13.24□□□□□ -0.29
IRF1-204ENST00000439555 F2P00734 622 aa13.24□□□□□ -0.29
IRF1-204ENST00000439555 IQCF3P0C7M6 154 aa13.24□□□□□ -0.29
IRF1-204ENST00000439555 MYCLP12524 364 aaPredicted RBP13.24□□□□□ -0.29
IRF1-204ENST00000439555 ICAM3P32942 547 aa13.24□□□□□ -0.29
IRF1-204ENST00000439555 MRE11P49959 708 aa13.24□□□□□ -0.29
IRF1-204ENST00000439555 RBL2Q08999 1139 aa13.24□□□□□ -0.29
IRF1-204ENST00000439555 GRB10Q13322 594 aa13.24□□□□□ -0.29
IRF1-204ENST00000439555 TSGA10IPQ3SY00 556 aa13.24□□□□□ -0.29
IRF1-204ENST00000439555 NFXL1Q6ZNB6 911 aa13.24□□□□□ -0.29
IRF1-204ENST00000439555 HERC6Q8IVU3 1022 aa13.24□□□□□ -0.29
IRF1-204ENST00000439555 TEX2Q8IWB9 1127 aa13.24□□□□□ -0.29
IRF1-204ENST00000439555 FAM178BQ8IXR5 827 aa13.24□□□□□ -0.29
IRF1-204ENST00000439555 CCDC155Q8N6L0 562 aa13.24□□□□□ -0.29
IRF1-204ENST00000439555 SNX27Q96L92 541 aa13.24□□□□□ -0.29
IRF1-204ENST00000439555 CD320Q9NPF0 282 aa13.24□□□□□ -0.29
IRF1-204ENST00000439555 SEC63Q9UGP8 760 aaKnown RBP13.24□□□□□ -0.29
IRF1-204ENST00000439555 WDFY4Q6ZS81 3184 aa13.24□□□□□ -0.29
IRF1-204ENST00000439555 BAIAP3O94812 1187 aa13.23□□□□□ -0.29
IRF1-204ENST00000439555 PTGISQ16647 500 aa13.23□□□□□ -0.29
IRF1-204ENST00000439555 GNPTABQ3T906 1256 aa13.23□□□□□ -0.29
IRF1-204ENST00000439555 KRT40Q6A162 431 aa13.23□□□□□ -0.29
IRF1-204ENST00000439555 FCHSD1Q86WN1 690 aa13.23□□□□□ -0.29
IRF1-204ENST00000439555 GJD3Q8N144 294 aa13.23□□□□□ -0.29
IRF1-204ENST00000439555 SRBD1Q8N5C6 995 aaKnown RBP13.23□□□□□ -0.29
IRF1-204ENST00000439555 AFAP1L1Q8TED9 768 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms