RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 TYW1BQ6NUM6 668 aa17.32■□□□□ 0.36
DHFR-201ENST00000439211 FAM114A1Q8IWE2 563 aa17.32■□□□□ 0.36
DHFR-201ENST00000439211 ANKRD13CQ8N6S4 541 aa17.32■□□□□ 0.36
DHFR-201ENST00000439211 SH3GL2Q99962 352 aa17.32■□□□□ 0.36
DHFR-201ENST00000439211 VIMP08670 466 aaKnown RBP17.31■□□□□ 0.36
DHFR-201ENST00000439211 LONP1P36776 959 aaKnown RBP17.31■□□□□ 0.36
DHFR-201ENST00000439211 ERVK-24P63145 666 aa17.31■□□□□ 0.36
DHFR-201ENST00000439211 SELENOSQ9BQE4 189 aa17.31■□□□□ 0.36
DHFR-201ENST00000439211 DCP1AQ9NPI6 582 aaPredicted RBP17.31■□□□□ 0.36
DHFR-201ENST00000439211 NFU1Q9UMS0 254 aa17.31■□□□□ 0.36
DHFR-201ENST00000439211 TTMPQ5BVD1 217 aa17.31■□□□□ 0.36
DHFR-201ENST00000439211 STAG2Q8N3U4 1231 aa17.31■□□□□ 0.36
DHFR-201ENST00000439211 DMGDHQ9UI17 866 aaKnown RBP17.31■□□□□ 0.36
DHFR-201ENST00000439211 FERP16591 822 aa17.31■□□□□ 0.36
DHFR-201ENST00000439211 GUCY2DQ02846 1103 aa17.31■□□□□ 0.36
DHFR-201ENST00000439211 MAEAQ7L5Y9 396 aa17.31■□□□□ 0.36
DHFR-201ENST00000439211 CCHCR1Q8TD31 782 aa17.31■□□□□ 0.36
DHFR-201ENST00000439211 SEC16BQ96JE7 1060 aa17.31■□□□□ 0.36
DHFR-201ENST00000439211 MINPP1Q9UNW1 487 aa17.31■□□□□ 0.36
DHFR-201ENST00000439211 EIF6P56537 245 aaKnown RBP17.3■□□□□ 0.36
DHFR-201ENST00000439211 EZH2Q15910 746 aaKnown RBP17.3■□□□□ 0.36
DHFR-201ENST00000439211 C2CD5Q86YS7 1000 aa17.3■□□□□ 0.36
DHFR-201ENST00000439211 CCDC197Q8NCU1 140 aa17.3■□□□□ 0.36
DHFR-201ENST00000439211 FAM84BQ96KN1 310 aaPredicted RBP17.3■□□□□ 0.36
DHFR-201ENST00000439211 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.3■□□□□ 0.36
DHFR-201ENST00000439211 DISC1Q9NRI5 854 aa17.3■□□□□ 0.36
DHFR-201ENST00000439211 ESYT3A0FGR9 886 aa17.3■□□□□ 0.36
DHFR-201ENST00000439211 TPP2P29144 1249 aaPredicted RBP17.3■□□□□ 0.36
DHFR-201ENST00000439211 SKOR1P84550 965 aa17.3■□□□□ 0.36
DHFR-201ENST00000439211 ANKRD20A8PQ5CZ79 823 aa17.3■□□□□ 0.36
DHFR-201ENST00000439211 SPTY2D1Q68D10 685 aaPredicted RBP17.3■□□□□ 0.36
DHFR-201ENST00000439211 ARHGAP22Q7Z5H3 698 aa17.3■□□□□ 0.36
DHFR-201ENST00000439211 SLC44A5Q8NCS7 719 aa17.3■□□□□ 0.36
DHFR-201ENST00000439211 FBF1Q8TES7 1133 aa17.3■□□□□ 0.36
DHFR-201ENST00000439211 UBLCP1Q8WVY7 318 aaPredicted RBP17.3■□□□□ 0.36
DHFR-201ENST00000439211 TEKT4Q8WW24 435 aa17.3■□□□□ 0.36
DHFR-201ENST00000439211 BICDL2A1A5D9 508 aa17.3■□□□□ 0.36
DHFR-201ENST00000439211 RASSF10A6NK89 507 aa17.3■□□□□ 0.36
DHFR-201ENST00000439211 TRAPPC10P48553 1259 aa17.3■□□□□ 0.36
DHFR-201ENST00000439211 DNM2P50570 870 aa17.3■□□□□ 0.36
DHFR-201ENST00000439211 ELOA2Q8IYF1 753 aaPredicted RBP17.3■□□□□ 0.36
DHFR-201ENST00000439211 MB21D1Q8N884 522 aa17.3■□□□□ 0.36
DHFR-201ENST00000439211 ALS2CR12Q96Q35 445 aa17.3■□□□□ 0.36
DHFR-201ENST00000439211 BRIP1Q9BX63 1249 aa17.3■□□□□ 0.36
DHFR-201ENST00000439211 PICK1Q9NRD5 415 aa17.3■□□□□ 0.36
DHFR-201ENST00000439211 CAMTA1Q9Y6Y1 1673 aa17.3■□□□□ 0.36
DHFR-201ENST00000439211 SEMA3EO15041 775 aa17.29■□□□□ 0.36
DHFR-201ENST00000439211 HIP1RO75146 1068 aa17.29■□□□□ 0.36
DHFR-201ENST00000439211 INHBEP58166 350 aa17.29■□□□□ 0.36
DHFR-201ENST00000439211 DIXDC1Q155Q3 683 aa17.29■□□□□ 0.36
DHFR-201ENST00000439211 PFKFB3Q16875 520 aaPredicted RBP17.29■□□□□ 0.36
DHFR-201ENST00000439211 EPB41L5Q9HCM4 733 aa17.29■□□□□ 0.36
DHFR-201ENST00000439211 STIM2Q9P246 746 aa17.29■□□□□ 0.36
DHFR-201ENST00000439211 ARPP21Q9UBL0 812 aaPredicted RBP17.29■□□□□ 0.36
DHFR-201ENST00000439211 G3V3G9 751 aa17.29■□□□□ 0.36
DHFR-201ENST00000439211 RCAN1P53805 252 aa17.29■□□□□ 0.36
DHFR-201ENST00000439211 DCAF8Q5TAQ9 597 aa17.29■□□□□ 0.36
DHFR-201ENST00000439211 MYLK4Q86YV6 388 aaPredicted RBP17.29■□□□□ 0.36
DHFR-201ENST00000439211 MTA3Q9BTC8 594 aa17.29■□□□□ 0.36
DHFR-201ENST00000439211 C6orf50Q9HD87 102 aa17.29■□□□□ 0.36
DHFR-201ENST00000439211 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.29■□□□□ 0.361e-6■■□□□ 14
DHFR-201ENST00000439211 PCDHA4Q9UN74 947 aa17.29■□□□□ 0.36
DHFR-201ENST00000439211 ARFGEF2Q9Y6D5 1785 aa17.29■□□□□ 0.36
DHFR-201ENST00000439211 ECEL1O95672 775 aa17.29■□□□□ 0.36
DHFR-201ENST00000439211 KLRK1P26718 216 aa17.29■□□□□ 0.36
DHFR-201ENST00000439211 SYCP3Q8IZU3 236 aa17.29■□□□□ 0.36
DHFR-201ENST00000439211 KLRF2D3W0D1 207 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 CREB3O43889 395 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 TMOD1P28289 359 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 CDKAL1Q5VV42 579 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 NGLY1Q96IV0 654 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 CNOT6LQ96LI5 555 aaKnown RBP17.28■□□□□ 0.36
DHFR-201ENST00000439211 ZFATQ9P243 1243 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 COL5A2P05997 1499 aaPredicted RBP17.28■□□□□ 0.36
DHFR-201ENST00000439211 AHCYL1O43865 530 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 TNNI2P48788 182 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 TMEM266Q2M3C6 531 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 MIS18BP1Q6P0N0 1132 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 TRAPPC11Q7Z392 1133 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 MFN1Q8IWA4 741 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 TSEN2Q8NCE0 465 aaKnown RBP17.28■□□□□ 0.36
DHFR-201ENST00000439211 HDAC7Q8WUI4 952 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 HPS3Q969F9 1004 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 ATP6V1G3Q96LB4 118 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 ZNF287Q9HBT7 754 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 ATP8A2Q9NTI2 1148 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 SMCO2A6NFE2 343 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 DNM1LO00429 736 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 KDM7AQ6ZMT4 941 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 KIAA0825Q8IV33 1275 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 MAB21L3Q8N8X9 362 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 RIOK1Q9BRS2 568 aaKnown RBP17.28■□□□□ 0.36
DHFR-201ENST00000439211 UBA5Q9GZZ9 404 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 SCN11AQ9UI33 1791 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 TLDC2A0PJX2 215 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 PHF20L1A8MW92 1017 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 HMGB1P1B2RPK0 211 aaPredicted RBP17.28■□□□□ 0.36
DHFR-201ENST00000439211 BMP2KQ9NSY1 1161 aaPredicted RBP17.28■□□□□ 0.36
DHFR-201ENST00000439211 AGPAT5Q9NUQ2 364 aa17.28■□□□□ 0.36
DHFR-201ENST00000439211 LIMA1Q9UHB6 759 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms