RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 FAM178BQ8IXR5 827 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 SLC44A5Q8NCS7 719 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 SPATA4Q8NEY3 305 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 SH3RF3Q8TEJ3 882 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-205ENST00000438362 ARHGEF10LQ9HCE6 1279 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 FAM114A2Q9NRY5 505 aa7.32□□□□□ -1.24
CSDE1-205ENST00000438362 POTEMA6NI47 508 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 GAS7O60861 476 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 PALMO75781 387 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 FOSP01100 380 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-205ENST00000438362 FCER1AP12319 257 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 CD44P16070 742 aaKnown RBP7.31□□□□□ -1.24
CSDE1-205ENST00000438362 MAP2K2P36507 400 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 TROAPQ12815 778 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 NKX1-1Q15270 411 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-205ENST00000438362 BEND6Q5SZJ8 279 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-205ENST00000438362 SLFN13Q68D06 897 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 ALKBH5Q6P6C2 394 aaKnown RBP7.31□□□□□ -1.24
CSDE1-205ENST00000438362 INTS8Q75QN2 995 aaKnown RBP7.31□□□□□ -1.24
CSDE1-205ENST00000438362 SRLQ86TD4 932 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 TADA2BQ86TJ2 420 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 FBXO11Q86XK2 927 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 STAG2Q8N3U4 1231 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 SUGCTQ9HAC7 445 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 AGPAT5Q9NUQ2 364 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 CEP72Q9P209 647 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 SNX12Q9UMY4 172 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 MEGF6O75095 1541 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 RICTORQ6R327 1708 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 PSMD14O00487 310 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 LMNB1P20700 586 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 SMTNP53814 917 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 KCNQ4P56696 695 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 ORC2Q13416 577 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-205ENST00000438362 CCDC6Q16204 474 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 CCDC93Q567U6 631 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 MUM1L1Q5H9M0 696 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 RSRC2Q7L4I2 434 aaKnown RBP7.31□□□□□ -1.24
CSDE1-205ENST00000438362 NSUN4Q96CB9 384 aaKnown RBP7.31□□□□□ -1.24
CSDE1-205ENST00000438362 CCDC17Q96LX7 622 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 HOMER3Q9NSC5 361 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 BAIAP2L1Q9UHR4 511 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 SERPINB13Q9UIV8 391 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 RABGAP1Q9Y3P9 1069 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 CNTNAP5Q8WYK1 1306 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 HMGB1P1B2RPK0 211 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-205ENST00000438362 TOM1O60784 492 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 ALDH3A1P30838 453 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 SLC16A2P36021 539 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 ZBTB16Q05516 673 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 GFPT1Q06210 699 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-205ENST00000438362 UBE2SQ16763 222 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 FAM83BQ5T0W9 1011 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 PNKPQ96T60 521 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 AMNQ9BXJ7 453 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 EDEM3Q9BZQ6 932 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 TRIM7Q9C029 511 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 DAAM1Q9Y4D1 1078 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 FAM169AQ9Y6X4 670 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 KNDC1Q76NI1 1749 aa7.31□□□□□ -1.24
CSDE1-205ENST00000438362 DDX39AO00148 427 aaKnown RBP7.3□□□□□ -1.24
CSDE1-205ENST00000438362 GAS8O95995 478 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 ERVK-24P63145 666 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 TBX2Q13207 712 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-205ENST00000438362 NAA25Q14CX7 972 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 CDKAL1Q5VV42 579 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 CCNI2Q6ZMN8 369 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-205ENST00000438362 MSANTD4Q8NCY6 345 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 GIMAP8Q8ND71 665 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-205ENST00000438362 CEP63Q96MT8 703 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 IQCGQ9H095 443 aaKnown RBP7.3□□□□□ -1.24
CSDE1-205ENST00000438362 SH2D4AQ9H788 454 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 VEZTQ9HBM0 779 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 FEZ2Q9UHY8 353 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-205ENST00000438362 ANAPC4Q9UJX5 808 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 PCDHA6Q9UN73 950 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 L1RE1Q9UN81 338 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 EXOC7Q9UPT5 735 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 PCDHA8Q9Y5H6 950 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 PNMA6FA0A0J9YX94 578 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 ZNF185O15231 689 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 NCK2O43639 380 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 SARSP49591 514 aaKnown RBP7.3□□□□□ -1.24
CSDE1-205ENST00000438362 SCNN1DP51172 638 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 DHX9Q08211 1270 aaKnown RBP7.3□□□□□ -1.24
CSDE1-205ENST00000438362 BIRC3Q13489 604 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 CUL1Q13616 776 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 CERKLQ49MI3 558 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-205ENST00000438362 WDR44Q5JSH3 913 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 NT5DC1Q5TFE4 455 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 CEP128Q6ZU80 1094 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 KCTD1Q719H9 257 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 FAM186BQ8IYM0 893 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 RAD54LQ92698 747 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 FNBP1Q96RU3 617 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 TCHPQ9BT92 498 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 LARSQ9P2J5 1176 aaKnown RBP7.3□□□□□ -1.24
CSDE1-205ENST00000438362 NWD1Q149M9 1564 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 FAM237AA0A1B0GTK4 181 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 CCDC188H7C350 402 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms