RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 CCDC178Q5BJE1 867 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 ARL6IP4Q66PJ3 421 aaKnown RBP13.66□□□□□ -0.22
TMEM116-202ENST00000437003 KIRREL3Q8IZU9 778 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 WDR66Q8TBY9 1149 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 ARHGEF1Q92888 912 aaKnown RBP13.66□□□□□ -0.22
TMEM116-202ENST00000437003 TSGA10Q9BZW7 698 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 FAM207AQ9NSI2 230 aaPredicted RBP13.66□□□□□ -0.22
TMEM116-202ENST00000437003 MCM8Q9UJA3 840 aa13.66□□□□□ -0.22
TMEM116-202ENST00000437003 ATXN2Q99700 1313 aaKnown RBP13.65□□□□□ -0.22
TMEM116-202ENST00000437003 PSMA7O14818 248 aa13.65□□□□□ -0.22
TMEM116-202ENST00000437003 AKR1B10O60218 316 aa13.65□□□□□ -0.22
TMEM116-202ENST00000437003 SPRED3Q2MJR0 410 aa13.65□□□□□ -0.22
TMEM116-202ENST00000437003 AMIGO3Q86WK7 504 aa13.65□□□□□ -0.22
TMEM116-202ENST00000437003 SPATS2Q86XZ4 545 aaKnown RBP13.65□□□□□ -0.22
TMEM116-202ENST00000437003 C8orf37Q96NL8 207 aa13.65□□□□□ -0.22
TMEM116-202ENST00000437003 GPR101Q96P66 508 aaPredicted RBP13.65□□□□□ -0.22
TMEM116-202ENST00000437003 A1CFQ9NQ94 594 aaKnown RBP13.65□□□□□ -0.22
TMEM116-202ENST00000437003 SALL4Q9UJQ4 1053 aa13.65□□□□□ -0.22
TMEM116-202ENST00000437003 CCNL1Q9UK58 526 aaPredicted RBP13.65□□□□□ -0.22
TMEM116-202ENST00000437003 PCDHA6Q9UN73 950 aa13.65□□□□□ -0.22
TMEM116-202ENST00000437003 PCDHA8Q9Y5H6 950 aa13.65□□□□□ -0.22
TMEM116-202ENST00000437003 LAMB1P07942 1786 aa13.65□□□□□ -0.22
TMEM116-202ENST00000437003 A6NNZ2 444 aa13.65□□□□□ -0.22
TMEM116-202ENST00000437003 TCP1P17987 556 aaKnown RBP13.65□□□□□ -0.22
TMEM116-202ENST00000437003 MDH1P40925 334 aaKnown RBP13.65□□□□□ -0.22
TMEM116-202ENST00000437003 KIF11P52732 1056 aa13.65□□□□□ -0.22
TMEM116-202ENST00000437003 SMTNP53814 917 aa13.65□□□□□ -0.22
TMEM116-202ENST00000437003 LETM2Q2VYF4 491 aa13.65□□□□□ -0.22
TMEM116-202ENST00000437003 TUBB8Q3ZCM7 444 aa13.65□□□□□ -0.22
TMEM116-202ENST00000437003 TMC4Q7Z404 712 aa13.65□□□□□ -0.22
TMEM116-202ENST00000437003 IQCKQ8N0W5 287 aa13.65□□□□□ -0.22
TMEM116-202ENST00000437003 ZNF444Q8N0Y2 327 aaPredicted RBP13.65□□□□□ -0.22
TMEM116-202ENST00000437003 TGFBRAP1Q8WUH2 860 aa13.65□□□□□ -0.22
TMEM116-202ENST00000437003 NGLY1Q96IV0 654 aa13.65□□□□□ -0.22
TMEM116-202ENST00000437003 CNOT6LQ96LI5 555 aaKnown RBP13.65□□□□□ -0.22
TMEM116-202ENST00000437003 ALS2CR12Q96Q35 445 aa13.65□□□□□ -0.22
TMEM116-202ENST00000437003 NOC4LQ9BVI4 516 aaKnown RBP13.65□□□□□ -0.22
TMEM116-202ENST00000437003 VAT1LQ9HCJ6 419 aa13.65□□□□□ -0.22
TMEM116-202ENST00000437003 SH3GLB2Q9NR46 395 aa13.65□□□□□ -0.22
TMEM116-202ENST00000437003 ARHGAP20Q9P2F6 1191 aa13.65□□□□□ -0.22
TMEM116-202ENST00000437003 CYTH3O43739 400 aa13.64□□□□□ -0.23
TMEM116-202ENST00000437003 BAG3O95817 575 aa13.64□□□□□ -0.23
TMEM116-202ENST00000437003 EIF4A3P38919 411 aaKnown RBP13.64□□□□□ -0.23
TMEM116-202ENST00000437003 PREPLQ4J6C6 727 aaPredicted RBP13.64□□□□□ -0.23
TMEM116-202ENST00000437003 TSHZ1Q6ZSZ6 1077 aa13.64□□□□□ -0.23
TMEM116-202ENST00000437003 CCDC121Q6ZUS5 278 aa13.64□□□□□ -0.23
TMEM116-202ENST00000437003 IFT20Q8IY31 132 aa13.64□□□□□ -0.23
TMEM116-202ENST00000437003 LRRC15Q8TF66 581 aa13.64□□□□□ -0.23
TMEM116-202ENST00000437003 HPS3Q969F9 1004 aa13.64□□□□□ -0.23
TMEM116-202ENST00000437003 THAP9Q9H5L6 903 aa13.64□□□□□ -0.23
TMEM116-202ENST00000437003 VEZTQ9HBM0 779 aa13.64□□□□□ -0.23
TMEM116-202ENST00000437003 EPHB6O15197 1021 aa13.64□□□□□ -0.23
TMEM116-202ENST00000437003 RASSF9O75901 435 aa13.64□□□□□ -0.23
TMEM116-202ENST00000437003 GNAQP50148 359 aa13.64□□□□□ -0.23
TMEM116-202ENST00000437003 SLC35G1Q2M3R5 365 aa13.64□□□□□ -0.23
TMEM116-202ENST00000437003 FAM182BQ5T319 152 aa13.64□□□□□ -0.23
TMEM116-202ENST00000437003 TTI2Q6NXR4 508 aa13.64□□□□□ -0.23
TMEM116-202ENST00000437003 RPAINQ86UA6 219 aa13.64□□□□□ -0.23
TMEM116-202ENST00000437003 MAPKAPK5Q8IW41 473 aa13.64□□□□□ -0.23
TMEM116-202ENST00000437003 MAD2L2Q9UI95 211 aa13.64□□□□□ -0.23
TMEM116-202ENST00000437003 KIAA1551Q9HCM1 1747 aa13.64□□□□□ -0.23
TMEM116-202ENST00000437003 ZNF831Q5JPB2 1677 aa13.63□□□□□ -0.23
TMEM116-202ENST00000437003 GOLGA6L7A0A1B0GV03 622 aa13.63□□□□□ -0.23
TMEM116-202ENST00000437003 CCNT1O60563 726 aaKnown RBP13.63□□□□□ -0.23
TMEM116-202ENST00000437003 NFIXQ14938 502 aa13.63□□□□□ -0.23
TMEM116-202ENST00000437003 PPP2R5AQ15172 486 aa13.63□□□□□ -0.23
TMEM116-202ENST00000437003 NBPF9Q3BBW0 867 aa13.63□□□□□ -0.23
TMEM116-202ENST00000437003 PIK3R5Q8WYR1 880 aa13.63□□□□□ -0.23
TMEM116-202ENST00000437003 CYFIP2Q96F07 1278 aa13.63□□□□□ -0.23
TMEM116-202ENST00000437003 ATP6V1G3Q96LB4 118 aa13.63□□□□□ -0.23
TMEM116-202ENST00000437003 DUSP9Q99956 384 aaKnown RBP13.63□□□□□ -0.23
TMEM116-202ENST00000437003 NUP58Q9BVL2 599 aa13.63□□□□□ -0.23
TMEM116-202ENST00000437003 HAUS2Q9NVX0 235 aa13.63□□□□□ -0.23
TMEM116-202ENST00000437003 IRS2Q9Y4H2 1338 aa13.63□□□□□ -0.23
TMEM116-202ENST00000437003 FAM107AO95990 144 aa13.63□□□□□ -0.23
TMEM116-202ENST00000437003 PLCG1P19174 1290 aa13.63□□□□□ -0.23
TMEM116-202ENST00000437003 RFC4P35249 363 aa13.63□□□□□ -0.23
TMEM116-202ENST00000437003 ASIC1P78348 528 aa13.63□□□□□ -0.23
TMEM116-202ENST00000437003 GSTO1P78417 241 aa13.63□□□□□ -0.23
TMEM116-202ENST00000437003 RASSF7Q02833 373 aa13.63□□□□□ -0.23
TMEM116-202ENST00000437003 SF3A3Q12874 501 aaKnown RBP eCLIP13.63□□□□□ -0.23
TMEM116-202ENST00000437003 GRM4Q14833 912 aa13.63□□□□□ -0.23
TMEM116-202ENST00000437003 GRIK5Q16478 980 aa13.63□□□□□ -0.23
TMEM116-202ENST00000437003 YTHDF3Q7Z739 585 aaKnown RBP13.63□□□□□ -0.23
TMEM116-202ENST00000437003 OR2W6PQ8NHA6 318 aa13.63□□□□□ -0.23
TMEM116-202ENST00000437003 MIEF2Q96C03 454 aa13.63□□□□□ -0.23
TMEM116-202ENST00000437003 KRT12Q99456 494 aa13.63□□□□□ -0.23
TMEM116-202ENST00000437003 TLR10Q9BXR5 811 aa13.63□□□□□ -0.23
TMEM116-202ENST00000437003 C21orf2O43822 256 aa13.62□□□□□ -0.23
TMEM116-202ENST00000437003 MAGEA1P43355 309 aa13.62□□□□□ -0.23
TMEM116-202ENST00000437003 NAPAP54920 295 aa13.62□□□□□ -0.23
TMEM116-202ENST00000437003 ITIH3Q06033 890 aa13.62□□□□□ -0.23
TMEM116-202ENST00000437003 PDE4DQ08499 809 aa13.62□□□□□ -0.23
TMEM116-202ENST00000437003 PAK2Q13177 524 aa13.62□□□□□ -0.23
TMEM116-202ENST00000437003 SNCBQ16143 134 aa13.62□□□□□ -0.23
TMEM116-202ENST00000437003 TXNRD1Q16881 649 aa13.62□□□□□ -0.23
TMEM116-202ENST00000437003 ANKS1AQ92625 1134 aa13.62□□□□□ -0.23
TMEM116-202ENST00000437003 MTMR8Q96EF0 704 aa13.62□□□□□ -0.23
TMEM116-202ENST00000437003 DDX20Q9UHI6 824 aaKnown RBP13.62□□□□□ -0.23
TMEM116-202ENST00000437003 PLAAQ9Y263 795 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms