RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 CLK2P49760 499 aaKnown RBP11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 CACNB3P54284 484 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 USP14P54578 494 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 MRPS25P82663 173 aaKnown RBP11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 TMEM119Q4V9L6 283 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 FIGNQ5HY92 759 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 SRLQ86TD4 932 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 GUF1Q8N442 669 aaKnown RBP11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 RIC8AQ9NPQ8 531 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 KCNQ5Q9NR82 932 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 USP40Q9NVE5 1235 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 VPS18Q9P253 973 aa11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 DDX25Q9UHL0 483 aaKnown RBP11.55□□□□□ -0.56
CLSTN1-203ENST00000435891 PNMA6FA0A0J9YX94 578 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 PVALEFA0A1B0GWK0 134 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 UBAP1LF5GYI3 381 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 POLRMTO00411 1230 aaKnown RBP11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 MPHOSPH10O00566 681 aaKnown RBP11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 RAD21O60216 631 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 ERLIN1O75477 346 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 VAV2P52735 878 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 TMEM266Q2M3C6 531 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 KRT79Q5XKE5 535 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 ZNF662Q6ZS27 426 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 CCDC91Q7Z6B0 441 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 SLF2Q8IX21 1173 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 ANKRD13CQ8N6S4 541 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 PSMB7Q99436 277 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 A0A1W2PQJ5 194 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 E9PMD0 336 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 SSBP05455 408 aaKnown RBP eCLIP11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 PDIA5Q14554 519 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 CCDC96Q2M329 555 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 RRAGAQ7L523 313 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 GJD4Q96KN9 370 aaPredicted RBP11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 DNAJC18Q9H819 358 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 JADE2Q9NQC1 790 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 SMARCAL1Q9NZC9 954 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 FAN1Q9Y2M0 1017 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 FOCADQ5VW36 1801 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 UBR3Q6ZT12 1888 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 IPO7O95373 1038 aaKnown RBP11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 MOCS3O95396 460 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 KIF11P52732 1056 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 KCNMA1Q12791 1236 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 MAN2A1Q16706 1144 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 CDC42EP5Q6NZY7 148 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 WDR93Q6P2C0 686 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 COG1Q8WTW3 980 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 BAP1Q92560 729 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 EHD2Q9NZN4 543 aa11.54□□□□□ -0.56
CLSTN1-203ENST00000435891 TAL1P17542 331 aaPredicted RBP11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 ADRA2BP18089 450 aa11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 HNRNPH3P31942 346 aaKnown RBP11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 C2orf54Q08AI8 447 aa11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 KIF5AQ12840 1032 aa11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 COASYQ13057 564 aa11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 ORC2Q13416 577 aaPredicted RBP11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 EZH2Q15910 746 aaKnown RBP11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 IFIH1Q9BYX4 1025 aaKnown RBP11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 PCDHA13Q9Y5I0 950 aa11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 PPEF1O14829 653 aaPredicted RBP11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 MMP14P50281 582 aa11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 CDK17Q00537 523 aa11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 PPP4R3AQ6IN85 833 aa11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 NELFCDQ8IXH7 590 aa11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 MICALL1Q8N3F8 863 aa11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 P2RX7Q99572 595 aaKnown RBP11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 LTBP1Q14766 1721 aa11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 hCG_1984214I3L0E3 225 aa11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 CXCR5P32302 372 aa11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 STAT3P40763 770 aa11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 SNAP25P60880 206 aa11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 APOBEC3HQ6NTF7 200 aaKnown RBP11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 ZNF713Q8N859 430 aaPredicted RBP11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 NLRC4Q9NPP4 1024 aa11.53□□□□□ -0.56
CLSTN1-203ENST00000435891 POTEB3A0JP26 581 aa11.52□□□□□ -0.56
CLSTN1-203ENST00000435891 POTECB2RU33 542 aa11.52□□□□□ -0.56
CLSTN1-203ENST00000435891 PPP1R2P41236 205 aa11.52□□□□□ -0.56
CLSTN1-203ENST00000435891 GFPT1Q06210 699 aaPredicted RBP11.52□□□□□ -0.56
CLSTN1-203ENST00000435891 TCP10Q12799 353 aa11.52□□□□□ -0.56
CLSTN1-203ENST00000435891 SPA17Q15506 151 aa11.52□□□□□ -0.56
CLSTN1-203ENST00000435891 ZCWPW2Q504Y3 356 aa11.52□□□□□ -0.56
CLSTN1-203ENST00000435891 DNAJC21Q5F1R6 531 aaKnown RBP11.52□□□□□ -0.56
CLSTN1-203ENST00000435891 POTEBQ6S5H4 581 aa11.52□□□□□ -0.56
CLSTN1-203ENST00000435891 TMC4Q7Z404 712 aa11.52□□□□□ -0.56
CLSTN1-203ENST00000435891 SEPT12Q8IYM1 358 aa11.52□□□□□ -0.56
CLSTN1-203ENST00000435891 HDAC7Q8WUI4 952 aa11.52□□□□□ -0.56
CLSTN1-203ENST00000435891 CUL5Q93034 780 aa11.52□□□□□ -0.56
CLSTN1-203ENST00000435891 CRAMP1Q96RY5 1269 aa11.52□□□□□ -0.56
CLSTN1-203ENST00000435891 CRACR2AQ9BSW2 395 aa11.52□□□□□ -0.56
CLSTN1-203ENST00000435891 TANGO6Q9C0B7 1094 aa11.52□□□□□ -0.56
CLSTN1-203ENST00000435891 SH2D4AQ9H788 454 aa11.52□□□□□ -0.56
CLSTN1-203ENST00000435891 PSTPIP2Q9H939 334 aa11.52□□□□□ -0.56
CLSTN1-203ENST00000435891 PCDHA12Q9UN75 941 aa11.52□□□□□ -0.56
CLSTN1-203ENST00000435891 ZBTB5O15062 677 aa11.52□□□□□ -0.57
CLSTN1-203ENST00000435891 MAP2K2P36507 400 aa11.52□□□□□ -0.57
CLSTN1-203ENST00000435891 CREG2Q8IUH2 290 aa11.52□□□□□ -0.57
CLSTN1-203ENST00000435891 GOLGA5Q8TBA6 731 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms