RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 TTC19Q6DKK2 380 aaPredicted RBP12.1□□□□□ -0.47
SCN4A-201ENST00000435607 CEP170P1Q96L14 293 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 CHCHD3Q9NX63 227 aaKnown RBP12.1□□□□□ -0.47
SCN4A-201ENST00000435607 WDR97A6NE52 1622 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 KCNJ18B7U540 433 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 SNX2O60749 519 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 KCNJ12Q14500 433 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 PCGF5Q86SE9 256 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 SUN2Q9UH99 717 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 MAPK4P31152 587 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 SPOPLQ6IQ16 392 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 IFT43Q96FT9 208 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 PPP1R12AO14974 1030 aaPredicted RBP12.1□□□□□ -0.47
SCN4A-201ENST00000435607 CREB3O43889 395 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 SLC10A5Q5PT55 438 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 DNAJC24Q6P3W2 148 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 KRBA2Q6ZNG9 492 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 CAPN12Q6ZSI9 719 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 DNAJC10Q8IXB1 793 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 SH3KBP1Q96B97 665 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 SLF1Q9BQI6 1058 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 OGFRQ9NZT2 677 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 H3BRJ5 948 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 GRIN1Q05586 938 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 DARS2Q6PI48 645 aaKnown RBP12.1□□□□□ -0.47
SCN4A-201ENST00000435607 SPATS2Q86XZ4 545 aaKnown RBP12.1□□□□□ -0.47
SCN4A-201ENST00000435607 TRIM59Q8IWR1 403 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 SCG3Q8WXD2 468 aaKnown RBP12.1□□□□□ -0.47
SCN4A-201ENST00000435607 ABHD8Q96I13 439 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 GSDMAQ96QA5 445 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 TRIM62Q9BVG3 475 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 TOPORSQ9NS56 1045 aaPredicted RBP12.1□□□□□ -0.47
SCN4A-201ENST00000435607 TBX22Q9Y458 520 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 SBNO1A3KN83 1393 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 UBXN8O00124 270 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 ZAP70P43403 619 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 BLZF1Q9H2G9 400 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 GTPBP10A4D1E9 387 aaKnown RBP12.1□□□□□ -0.47
SCN4A-201ENST00000435607 RASGRF2O14827 1237 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 MORC3Q14149 939 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 E4F1Q66K89 784 aaPredicted RBP12.1□□□□□ -0.47
SCN4A-201ENST00000435607 DHX36Q9H2U1 1008 aaKnown RBP12.1□□□□□ -0.47
SCN4A-201ENST00000435607 CUEDC2Q9H467 287 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 KCNJ6P48051 423 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 IMPG1Q17R60 797 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 RWDD4Q6NW29 188 aaKnown RBP12.09□□□□□ -0.47
SCN4A-201ENST00000435607 SERPINI1Q99574 410 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 TRIM54Q9BYV2 358 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 KCNJ14Q9UNX9 436 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 MSH2P43246 934 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 SLFN12LQ6IEE8 588 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 MTBPQ96DY7 904 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 UPF3AQ9H1J1 476 aaKnown RBP12.09□□□□□ -0.47
SCN4A-201ENST00000435607 PCDHB8Q9UN66 801 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 GRIN2AQ12879 1464 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 ZNF804BA4D1E1 1349 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 CCDC151A5D8V7 595 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 BBOX1O75936 387 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 GCFC2P16383 781 aaKnown RBP12.09□□□□□ -0.47
SCN4A-201ENST00000435607 PSMD2Q13200 908 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 STX19Q8N4C7 294 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 CLCA2Q9UQC9 943 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 ALCAMQ13740 583 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 PDXDC2PQ6P474 469 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 FAM160B2Q86V87 743 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 ACAP3Q96P50 834 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 KANSL2Q9H9L4 492 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 CLRN2A0PK11 232 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 SCG2P13521 617 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 PAWRQ96IZ0 340 aaKnown RBP12.09□□□□□ -0.47
SCN4A-201ENST00000435607 SRPRBQ9Y5M8 271 aaKnown RBP12.09□□□□□ -0.47
SCN4A-201ENST00000435607 ATP10DQ9P241 1426 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 PARD3Q8TEW0 1356 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 TCP1P17987 556 aaKnown RBP12.09□□□□□ -0.47
SCN4A-201ENST00000435607 PSMA3P25788 255 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 OCRLQ01968 901 aa12.09□□□□□ -0.47
SCN4A-201ENST00000435607 LONP1P36776 959 aaKnown RBP12.08□□□□□ -0.48
SCN4A-201ENST00000435607 TNFAIP2Q03169 654 aa12.08□□□□□ -0.48
SCN4A-201ENST00000435607 MXD4Q14582 209 aaPredicted RBP12.08□□□□□ -0.48
SCN4A-201ENST00000435607 TAF1BQ53T94 588 aaPredicted RBP12.08□□□□□ -0.48
SCN4A-201ENST00000435607 FAM26FQ5R3K3 315 aa12.08□□□□□ -0.48
SCN4A-201ENST00000435607 NCOA5Q9HCD5 579 aaKnown RBP12.08□□□□□ -0.48
SCN4A-201ENST00000435607 GOLGA8KD6RF30 607 aa12.08□□□□□ -0.48
SCN4A-201ENST00000435607 MYO1DO94832 1006 aa12.08□□□□□ -0.48
SCN4A-201ENST00000435607 FBLN1P23142 703 aa12.08□□□□□ -0.48
SCN4A-201ENST00000435607 NFX1Q12986 1120 aaKnown RBP12.08□□□□□ -0.48
SCN4A-201ENST00000435607 TUBB6Q9BUF5 446 aa12.08□□□□□ -0.48
SCN4A-201ENST00000435607 BAIAP2L1Q9UHR4 511 aa12.08□□□□□ -0.48
SCN4A-201ENST00000435607 POC1B-GALNT4F8VUJ3 575 aa12.08□□□□□ -0.48
SCN4A-201ENST00000435607 CATSPER4Q7RTX7 472 aa12.08□□□□□ -0.48
SCN4A-201ENST00000435607 ZNF653Q96CK0 615 aa12.08□□□□□ -0.48
SCN4A-201ENST00000435607 HEXIM2Q96MH2 286 aaKnown RBP12.08□□□□□ -0.48
SCN4A-201ENST00000435607 EEF1B2P24534 225 aaKnown RBP12.08□□□□□ -0.48
SCN4A-201ENST00000435607 CAPRIN1Q14444 709 aaKnown RBP12.08□□□□□ -0.48
SCN4A-201ENST00000435607 ERFEQ4G0M1 354 aa12.08□□□□□ -0.48
SCN4A-201ENST00000435607 DEPDC1BQ8WUY9 529 aa12.08□□□□□ -0.48
SCN4A-201ENST00000435607 MYL10Q9BUA6 226 aa12.08□□□□□ -0.48
SCN4A-201ENST00000435607 SYTL2Q9HCH5 934 aa12.08□□□□□ -0.48
SCN4A-201ENST00000435607 MAP3K20Q9NYL2 800 aaKnown RBP12.08□□□□□ -0.48
SCN4A-201ENST00000435607 POLR2FP61218 127 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms