RNA–Protein interactions for RNA: ENST00000433496.5

RFC4-207, Transcript of replication factor C subunit 4, humanhuman

TSL 5 BASIC

Gene RFC4, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-207ENST00000433496 ZNF286BP0CG31 522 aa11.11□□□□□ -0.63
RFC4-207ENST00000433496 RXRAP19793 462 aa11.11□□□□□ -0.63
RFC4-207ENST00000433496 UBA1P22314 1058 aaKnown RBP11.11□□□□□ -0.63
RFC4-207ENST00000433496 PSEN2P49810 448 aa11.11□□□□□ -0.63
RFC4-207ENST00000433496 MFSD10Q14728 455 aa11.11□□□□□ -0.63
RFC4-207ENST00000433496 CELF3Q5SZQ8 465 aaKnown RBP11.11□□□□□ -0.63
RFC4-207ENST00000433496 SKAP1Q86WV1 359 aa11.11□□□□□ -0.63
RFC4-207ENST00000433496 MAFAQ8NHW3 353 aaPredicted RBP11.11□□□□□ -0.63
RFC4-207ENST00000433496 IL31RAQ8NI17 732 aa11.11□□□□□ -0.63
RFC4-207ENST00000433496 CAGE1Q8TC20 777 aa11.11□□□□□ -0.63
RFC4-207ENST00000433496 PPP1R13LQ8WUF5 828 aa11.11□□□□□ -0.63
RFC4-207ENST00000433496 MYLIPQ8WY64 445 aa11.11□□□□□ -0.63
RFC4-207ENST00000433496 NEK1Q96PY6 1258 aa11.11□□□□□ -0.63
RFC4-207ENST00000433496 ALG1Q9BT22 464 aa11.11□□□□□ -0.63
RFC4-207ENST00000433496 LRRC2Q9BYS8 371 aa11.11□□□□□ -0.63
RFC4-207ENST00000433496 TTYH1Q9H313 450 aaPredicted RBP11.11□□□□□ -0.63
RFC4-207ENST00000433496 ZNF576Q9H609 170 aa11.11□□□□□ -0.63
RFC4-207ENST00000433496 COL6A3P12111 3177 aa11.11□□□□□ -0.63
RFC4-207ENST00000433496 PPFIA4O75335 1185 aa11.1□□□□□ -0.63
RFC4-207ENST00000433496 HMGB1P09429 215 aaKnown RBP11.1□□□□□ -0.63
RFC4-207ENST00000433496 NEDD9Q14511 834 aa11.1□□□□□ -0.63
RFC4-207ENST00000433496 KIAA0753Q2KHM9 967 aa11.1□□□□□ -0.63
RFC4-207ENST00000433496 RASIP1Q5U651 963 aa11.1□□□□□ -0.63
RFC4-207ENST00000433496 XRRA1Q6P2D8 792 aa11.1□□□□□ -0.63
RFC4-207ENST00000433496 HEATR3Q7Z4Q2 680 aa11.1□□□□□ -0.63
RFC4-207ENST00000433496 SESTD1Q86VW0 696 aa11.1□□□□□ -0.63
RFC4-207ENST00000433496 RAB11FIP4Q86YS3 637 aa11.1□□□□□ -0.63
RFC4-207ENST00000433496 FANCBQ8NB91 859 aa11.1□□□□□ -0.63
RFC4-207ENST00000433496 AFAP1L1Q8TED9 768 aa11.1□□□□□ -0.63
RFC4-207ENST00000433496 GAS2L1Q99501 681 aaPredicted RBP11.1□□□□□ -0.63
RFC4-207ENST00000433496 PBX4Q9BYU1 374 aa11.1□□□□□ -0.63
RFC4-207ENST00000433496 PSTPIP2Q9H939 334 aa11.1□□□□□ -0.63
RFC4-207ENST00000433496 EHMT1Q9H9B1 1298 aa11.1□□□□□ -0.63
RFC4-207ENST00000433496 SLC28A3Q9HAS3 691 aa11.1□□□□□ -0.63
RFC4-207ENST00000433496 RBM28Q9NW13 759 aaKnown RBP11.1□□□□□ -0.63
RFC4-207ENST00000433496 CXXC1Q9P0U4 656 aaPredicted RBP11.1□□□□□ -0.63
RFC4-207ENST00000433496 NAP1L2Q9ULW6 460 aaPredicted RBP11.1□□□□□ -0.63
RFC4-207ENST00000433496 FRMPD4Q14CM0 1322 aa11.09□□□□□ -0.63
RFC4-207ENST00000433496 SPDYE3A6NKU9 549 aa11.09□□□□□ -0.63
RFC4-207ENST00000433496 GRXCR1A8MXD5 290 aa11.09□□□□□ -0.63
RFC4-207ENST00000433496 PIK3CDO00329 1044 aa11.09□□□□□ -0.63
RFC4-207ENST00000433496 ZBTB43O43298 467 aa11.09□□□□□ -0.63
RFC4-207ENST00000433496 FIBPO43427 364 aa11.09□□□□□ -0.63
RFC4-207ENST00000433496 RGS20O76081 388 aa11.09□□□□□ -0.63
RFC4-207ENST00000433496 PARNO95453 639 aaKnown RBP11.09□□□□□ -0.63
RFC4-207ENST00000433496 F2P00734 622 aa11.09□□□□□ -0.63
RFC4-207ENST00000433496 ATP2A2P16615 1042 aaKnown RBP11.09□□□□□ -0.63
RFC4-207ENST00000433496 MYSM1Q5VVJ2 828 aa11.09□□□□□ -0.63
RFC4-207ENST00000433496 PCNX4Q63HM2 1172 aa11.09□□□□□ -0.63
RFC4-207ENST00000433496 GDF6Q6KF10 455 aaPredicted RBP11.09□□□□□ -0.63
RFC4-207ENST00000433496 USP17L6PQ6QN14 398 aa11.09□□□□□ -0.63
RFC4-207ENST00000433496 TMTC3Q6ZXV5 915 aa11.09□□□□□ -0.63
RFC4-207ENST00000433496 DHX32Q7L7V1 743 aaKnown RBP11.09□□□□□ -0.63
RFC4-207ENST00000433496 NLRX1Q86UT6 975 aa11.09□□□□□ -0.63
RFC4-207ENST00000433496 SGMS1Q86VZ5 419 aa11.09□□□□□ -0.63
RFC4-207ENST00000433496 CMTR1Q8N1G2 835 aaKnown RBP11.09□□□□□ -0.63
RFC4-207ENST00000433496 CCDC82Q8N4S0 544 aa11.09□□□□□ -0.63
RFC4-207ENST00000433496 SRBD1Q8N5C6 995 aaKnown RBP11.09□□□□□ -0.63
RFC4-207ENST00000433496 GIMAP8Q8ND71 665 aaPredicted RBP11.09□□□□□ -0.63
RFC4-207ENST00000433496 KAT2BQ92831 832 aa11.09□□□□□ -0.63
RFC4-207ENST00000433496 ZFP91Q96JP5 570 aaPredicted RBP11.09□□□□□ -0.63
RFC4-207ENST00000433496 HDAC6Q9UBN7 1215 aa11.09□□□□□ -0.63
RFC4-207ENST00000433496 GTF2IRD1Q9UHL9 959 aa11.09□□□□□ -0.63
RFC4-207ENST00000433496 CUL9Q8IWT3 2517 aa11.09□□□□□ -0.63
RFC4-207ENST00000433496 TET1Q8NFU7 2136 aa11.08□□□□□ -0.64
RFC4-207ENST00000433496 IQCF3P0C7M6 154 aa11.08□□□□□ -0.64
RFC4-207ENST00000433496 SELPP16109 830 aa11.08□□□□□ -0.64
RFC4-207ENST00000433496 PBX2P40425 430 aa11.08□□□□□ -0.64
RFC4-207ENST00000433496 KCNJ6P48051 423 aa11.08□□□□□ -0.64
RFC4-207ENST00000433496 PTK7Q13308 1070 aa11.08□□□□□ -0.64
RFC4-207ENST00000433496 RTN1Q16799 776 aa11.08□□□□□ -0.64
RFC4-207ENST00000433496 HSDL1Q3SXM5 330 aa11.08□□□□□ -0.64
RFC4-207ENST00000433496 APOA5Q6Q788 366 aa11.08□□□□□ -0.64
RFC4-207ENST00000433496 METTL7BQ6UX53 244 aa11.08□□□□□ -0.64
RFC4-207ENST00000433496 LRRC8DQ7L1W4 858 aa11.08□□□□□ -0.64
RFC4-207ENST00000433496 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.08□□□□□ -0.64
RFC4-207ENST00000433496 CDHR1Q96JP9 859 aa11.08□□□□□ -0.64
RFC4-207ENST00000433496 INPP4AQ96PE3 977 aaPredicted RBP11.08□□□□□ -0.64
RFC4-207ENST00000433496 SLC9A7Q96T83 725 aa11.08□□□□□ -0.64
RFC4-207ENST00000433496 RTEL1Q9NZ71 1219 aa11.08□□□□□ -0.64
RFC4-207ENST00000433496 ZNF215Q9UL58 517 aaPredicted RBP11.08□□□□□ -0.64
RFC4-207ENST00000433496 KLF18A0A0U1RQI7 1052 aa11.07□□□□□ -0.64
RFC4-207ENST00000433496 hCG_1642624A0A1W2PR95 340 aa11.07□□□□□ -0.64
RFC4-207ENST00000433496 GOLGA8AA7E2F4 631 aa11.07□□□□□ -0.64
RFC4-207ENST00000433496 GOLGA8BA8MQT2 603 aa11.07□□□□□ -0.64
RFC4-207ENST00000433496 SPATA31C2B4DYI2 1134 aa11.07□□□□□ -0.64
RFC4-207ENST00000433496 BAIAP3O94812 1187 aa11.07□□□□□ -0.64
RFC4-207ENST00000433496 REC8O95072 547 aa11.07□□□□□ -0.64
RFC4-207ENST00000433496 HOXD8P13378 290 aaPredicted RBP11.07□□□□□ -0.64
RFC4-207ENST00000433496 ICAM3P32942 547 aa11.07□□□□□ -0.64
RFC4-207ENST00000433496 NAPAP54920 295 aa11.07□□□□□ -0.64
RFC4-207ENST00000433496 MRPS9P82933 396 aaKnown RBP11.07□□□□□ -0.64
RFC4-207ENST00000433496 SP2Q02086 613 aa11.07□□□□□ -0.64
RFC4-207ENST00000433496 SP4Q02446 784 aa11.07□□□□□ -0.64
RFC4-207ENST00000433496 GRIN2CQ14957 1233 aa11.07□□□□□ -0.64
RFC4-207ENST00000433496 PPP2R2DQ66LE6 453 aa11.07□□□□□ -0.64
RFC4-207ENST00000433496 PPP1R18Q6NYC8 613 aa11.07□□□□□ -0.64
RFC4-207ENST00000433496 CYFIP1Q7L576 1253 aa11.07□□□□□ -0.64
RFC4-207ENST00000433496 GPKOWQ92917 476 aaPredicted RBP eCLIP11.07□□□□□ -0.647e-6■■■■■ 33.4
RFC4-207ENST00000433496 TCEANC2Q96MN5 208 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms