RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 BLACEA4D250 179 aa5.22□□□□□ -1.57
CLK1-204ENST00000432425 KRIT1O00522 736 aa5.22□□□□□ -1.57
CLK1-204ENST00000432425 SMARCA5O60264 1052 aaPredicted RBP5.22□□□□□ -1.57
CLK1-204ENST00000432425 MSCO60682 206 aa5.22□□□□□ -1.57
CLK1-204ENST00000432425 CTSWP56202 376 aa5.22□□□□□ -1.57
CLK1-204ENST00000432425 GPR85P60893 370 aa5.22□□□□□ -1.57
CLK1-204ENST00000432425 NTRK3Q16288 839 aa5.22□□□□□ -1.57
CLK1-204ENST00000432425 KIZQ2M2Z5 673 aa5.22□□□□□ -1.57
CLK1-204ENST00000432425 EMC4Q5J8M3 183 aa5.22□□□□□ -1.57
CLK1-204ENST00000432425 SOGA3Q5TF21 947 aa5.22□□□□□ -1.57
CLK1-204ENST00000432425 LILRA6Q6PI73 481 aa5.22□□□□□ -1.57
CLK1-204ENST00000432425 KCNT2Q6UVM3 1135 aa5.22□□□□□ -1.57
CLK1-204ENST00000432425 LIPIQ6XZB0 460 aa5.22□□□□□ -1.57
CLK1-204ENST00000432425 TTLL7Q6ZT98 887 aa5.22□□□□□ -1.57
CLK1-204ENST00000432425 IFNL3Q8IZI9 196 aa5.22□□□□□ -1.57
CLK1-204ENST00000432425 TP53I13Q8NBR0 393 aaPredicted RBP5.22□□□□□ -1.57
CLK1-204ENST00000432425 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.22□□□□□ -1.57
CLK1-204ENST00000432425 SH3D21A4FU49 640 aa5.21□□□□□ -1.57
CLK1-204ENST00000432425 GRK2P25098 689 aa5.21□□□□□ -1.57
CLK1-204ENST00000432425 GRK3P35626 688 aa5.21□□□□□ -1.57
CLK1-204ENST00000432425 KCNC1P48547 511 aa5.21□□□□□ -1.57
CLK1-204ENST00000432425 SLURP1P55000 103 aa5.21□□□□□ -1.57
CLK1-204ENST00000432425 NKX3-2P78367 333 aa5.21□□□□□ -1.57
CLK1-204ENST00000432425 SMAD4Q13485 552 aaKnown RBP5.21□□□□□ -1.57
CLK1-204ENST00000432425 STYK1Q6J9G0 422 aa5.21□□□□□ -1.57
CLK1-204ENST00000432425 LBX2Q6XYB7 198 aa5.21□□□□□ -1.57
CLK1-204ENST00000432425 ADGRG2Q8IZP9 1017 aa5.21□□□□□ -1.57
CLK1-204ENST00000432425 FAM26EQ8N5C1 309 aa5.21□□□□□ -1.57
CLK1-204ENST00000432425 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.21□□□□□ -1.573e-7■■■□□ 17.3
CLK1-204ENST00000432425 FEZF2Q8TBJ5 459 aa5.21□□□□□ -1.57
CLK1-204ENST00000432425 PHOSPHO1Q8TCT1 267 aa5.21□□□□□ -1.57
CLK1-204ENST00000432425 ZNF526Q8TF50 670 aaPredicted RBP5.21□□□□□ -1.57
CLK1-204ENST00000432425 DEPDC7Q96QD5 511 aa5.21□□□□□ -1.57
CLK1-204ENST00000432425 GORASP1Q9BQQ3 440 aa5.21□□□□□ -1.57
CLK1-204ENST00000432425 JAM3Q9BX67 310 aa5.21□□□□□ -1.57
CLK1-204ENST00000432425 NTMQ9P121 344 aa5.21□□□□□ -1.57
CLK1-204ENST00000432425 MYOTQ9UBF9 498 aa5.21□□□□□ -1.57
CLK1-204ENST00000432425 PPARGC1AQ9UBK2 798 aaKnown RBP5.21□□□□□ -1.57
CLK1-204ENST00000432425 TRBV23-1A0A0A0MS06 115 aa5.21□□□□□ -1.58
CLK1-204ENST00000432425 A0A1B0GTL3 188 aa5.21□□□□□ -1.58
CLK1-204ENST00000432425 TCRBV5S2A0A599 114 aa5.21□□□□□ -1.58
CLK1-204ENST00000432425 TADA3O75528 432 aa5.21□□□□□ -1.58
CLK1-204ENST00000432425 STAT5AP42229 794 aa5.21□□□□□ -1.58
CLK1-204ENST00000432425 SUMO1P63165 101 aaKnown RBP5.21□□□□□ -1.58
CLK1-204ENST00000432425 RBL2Q08999 1139 aa5.21□□□□□ -1.58
CLK1-204ENST00000432425 SERINC3Q13530 473 aa5.21□□□□□ -1.58
CLK1-204ENST00000432425 SCUBE1Q8IWY4 988 aa5.21□□□□□ -1.58
CLK1-204ENST00000432425 SYT8Q8NBV8 401 aa5.21□□□□□ -1.58
CLK1-204ENST00000432425 PMFBP1Q8TBY8 1022 aa5.21□□□□□ -1.58
CLK1-204ENST00000432425 TOE1Q96GM8 510 aaKnown RBP5.21□□□□□ -1.58
CLK1-204ENST00000432425 ALG1Q9BT22 464 aa5.21□□□□□ -1.58
CLK1-204ENST00000432425 C11orf84Q9BUA3 381 aaPredicted RBP5.21□□□□□ -1.58
CLK1-204ENST00000432425 SMOC1Q9H4F8 434 aa5.21□□□□□ -1.58
CLK1-204ENST00000432425 DTLQ9NZJ0 730 aa5.21□□□□□ -1.58
CLK1-204ENST00000432425 KDM2BQ8NHM5 1336 aa5.2□□□□□ -1.58
CLK1-204ENST00000432425 OTOL1A6NHN0 477 aaPredicted RBP5.2□□□□□ -1.58
CLK1-204ENST00000432425 ADCY3O60266 1144 aa5.2□□□□□ -1.58
CLK1-204ENST00000432425 DIAPH1O60610 1272 aaKnown RBP5.2□□□□□ -1.58
CLK1-204ENST00000432425 GNAT1P11488 350 aa5.2□□□□□ -1.58
CLK1-204ENST00000432425 SARSP49591 514 aaKnown RBP5.2□□□□□ -1.58
CLK1-204ENST00000432425 RASA3Q14644 834 aa5.2□□□□□ -1.58
CLK1-204ENST00000432425 CYP4F22Q6NT55 531 aa5.2□□□□□ -1.58
CLK1-204ENST00000432425 ZDHHC14Q8IZN3 488 aa5.2□□□□□ -1.58
CLK1-204ENST00000432425 CARFQ8N187 725 aa5.2□□□□□ -1.58
CLK1-204ENST00000432425 TTLL6Q8N841 843 aa5.2□□□□□ -1.58
CLK1-204ENST00000432425 LINC00482Q8N8I6 264 aa5.2□□□□□ -1.58
CLK1-204ENST00000432425 ZBTB38Q8NAP3 1195 aaPredicted RBP5.2□□□□□ -1.58
CLK1-204ENST00000432425 ARRDC4Q8NCT1 418 aa5.2□□□□□ -1.58
CLK1-204ENST00000432425 SPATA25Q9BR10 227 aa5.2□□□□□ -1.58
CLK1-204ENST00000432425 XYLT2Q9H1B5 865 aa5.2□□□□□ -1.58
CLK1-204ENST00000432425 SLC6A20Q9NP91 592 aa5.2□□□□□ -1.58
CLK1-204ENST00000432425 SNTG2Q9NY99 539 aa5.2□□□□□ -1.58
CLK1-204ENST00000432425 NUB1Q9Y5A7 615 aa5.2□□□□□ -1.58
CLK1-204ENST00000432425 FAM47E-STBD1D6RA91 191 aa5.19□□□□□ -1.58
CLK1-204ENST00000432425 DLX2Q07687 328 aaPredicted RBP5.19□□□□□ -1.58
CLK1-204ENST00000432425 SPIRE1Q08AE8 756 aa5.19□□□□□ -1.58
CLK1-204ENST00000432425 NFIXQ14938 502 aa5.19□□□□□ -1.58
CLK1-204ENST00000432425 LCE4AQ5TA78 99 aa5.19□□□□□ -1.58
CLK1-204ENST00000432425 MAMDC2Q7Z304 686 aaPredicted RBP5.19□□□□□ -1.58
CLK1-204ENST00000432425 LRP10Q7Z4F1 713 aa5.19□□□□□ -1.58
CLK1-204ENST00000432425 MTDHQ86UE4 582 aaKnown RBP5.19□□□□□ -1.58
CLK1-204ENST00000432425 TRIM48Q8IWZ4 208 aa5.19□□□□□ -1.58
CLK1-204ENST00000432425 KYQ8NBH2 561 aa5.19□□□□□ -1.58
CLK1-204ENST00000432425 PIP4K2CQ8TBX8 421 aa5.19□□□□□ -1.58
CLK1-204ENST00000432425 SRPK1Q96SB4 655 aaKnown RBP5.19□□□□□ -1.58
CLK1-204ENST00000432425 KCNJ15Q99712 375 aa5.19□□□□□ -1.58
CLK1-204ENST00000432425 CDIP1Q9H305 208 aa5.19□□□□□ -1.58
CLK1-204ENST00000432425 SPATA6Q9NWH7 488 aaPredicted RBP5.19□□□□□ -1.58
CLK1-204ENST00000432425 A0A0G2JLL6 359 aaPredicted RBP5.18□□□□□ -1.58
CLK1-204ENST00000432425 AQP7O14520 342 aa5.18□□□□□ -1.58
CLK1-204ENST00000432425 SOD2P04179 222 aa5.18□□□□□ -1.58
CLK1-204ENST00000432425 THBS2P35442 1172 aa5.18□□□□□ -1.58
CLK1-204ENST00000432425 ITGA1P56199 1179 aa5.18□□□□□ -1.58
CLK1-204ENST00000432425 CR1LQ2VPA4 569 aa5.18□□□□□ -1.58
CLK1-204ENST00000432425 FAM209AQ5JX71 171 aa5.18□□□□□ -1.58
CLK1-204ENST00000432425 OTOP3Q7RTS5 596 aa5.18□□□□□ -1.58
CLK1-204ENST00000432425 STK32CQ86UX6 486 aa5.18□□□□□ -1.58
CLK1-204ENST00000432425 SREK1Q8WXA9 508 aaKnown RBP5.18□□□□□ -1.58
CLK1-204ENST00000432425 USP40Q9NVE5 1235 aa5.18□□□□□ -1.58
CLK1-204ENST00000432425 RTEL1Q9NZ71 1219 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms