RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 MARCH6O60337 910 aa20.58■□□□□ 0.88
HMGN1-206ENST00000431390 PEX10O60683 326 aa20.58■□□□□ 0.88
HMGN1-206ENST00000431390 ERCC3P19447 782 aa20.58■□□□□ 0.88
HMGN1-206ENST00000431390 TXLNAP40222 546 aa20.58■□□□□ 0.88
HMGN1-206ENST00000431390 ZNF445P59923 1031 aa20.58■□□□□ 0.88
HMGN1-206ENST00000431390 UBXN2AP68543 259 aa20.58■□□□□ 0.88
HMGN1-206ENST00000431390 SETQ01105 290 aaPredicted RBP20.58■□□□□ 0.88
HMGN1-206ENST00000431390 PDIA5Q14554 519 aa20.58■□□□□ 0.88
HMGN1-206ENST00000431390 Q3C1V9 767 aa20.58■□□□□ 0.88
HMGN1-206ENST00000431390 CEP55Q53EZ4 464 aa20.58■□□□□ 0.88
HMGN1-206ENST00000431390 USP49Q70CQ1 688 aa20.58■□□□□ 0.88
HMGN1-206ENST00000431390 NIPA1Q7RTP0 329 aa20.58■□□□□ 0.88
HMGN1-206ENST00000431390 ANKRD35Q8N283 1001 aa20.58■□□□□ 0.88
HMGN1-206ENST00000431390 ETNPPLQ8TBG4 499 aa20.58■□□□□ 0.88
HMGN1-206ENST00000431390 PDCD2LQ9BRP1 358 aa20.58■□□□□ 0.88
HMGN1-206ENST00000431390 TNMDQ9H2S6 317 aa20.58■□□□□ 0.88
HMGN1-206ENST00000431390 MROH8Q9H579 483 aa20.58■□□□□ 0.88
HMGN1-206ENST00000431390 MORF4L1Q9UBU8 362 aa20.58■□□□□ 0.88
HMGN1-206ENST00000431390 CCNA1P78396 465 aa20.57■□□□□ 0.88
HMGN1-206ENST00000431390 PGM5Q15124 567 aa20.57■□□□□ 0.88
HMGN1-206ENST00000431390 ARHGEF16Q5VV41 709 aa20.57■□□□□ 0.88
HMGN1-206ENST00000431390 GPRC5AQ8NFJ5 357 aa20.57■□□□□ 0.88
HMGN1-206ENST00000431390 NSUN6Q8TEA1 469 aaKnown RBP20.57■□□□□ 0.88
HMGN1-206ENST00000431390 CCSER1Q9C0I3 900 aa20.57■□□□□ 0.88
HMGN1-206ENST00000431390 MEIS1O00470 390 aa20.56■□□□□ 0.88
HMGN1-206ENST00000431390 MYCP01106 439 aaPredicted RBP20.56■□□□□ 0.88
HMGN1-206ENST00000431390 BCRP11274 1271 aa20.56■□□□□ 0.88
HMGN1-206ENST00000431390 EIF2AK2P19525 551 aaKnown RBP20.56■□□□□ 0.88
HMGN1-206ENST00000431390 TECP42680 631 aa20.56■□□□□ 0.88
HMGN1-206ENST00000431390 RBM43Q6ZSC3 357 aaKnown RBP20.56■□□□□ 0.88
HMGN1-206ENST00000431390 DNERQ8NFT8 737 aa20.56■□□□□ 0.88
HMGN1-206ENST00000431390 MXRA8Q9BRK3 442 aa20.56■□□□□ 0.88
HMGN1-206ENST00000431390 TTC12Q9H892 705 aaPredicted RBP20.56■□□□□ 0.88
HMGN1-206ENST00000431390 PCDHA12Q9UN75 941 aa20.56■□□□□ 0.88
HMGN1-206ENST00000431390 POLR2DO15514 142 aaKnown RBP20.55■□□□□ 0.88
HMGN1-206ENST00000431390 ARHGEF6Q15052 776 aa20.55■□□□□ 0.88
HMGN1-206ENST00000431390 PLA2G4DQ86XP0 818 aa20.55■□□□□ 0.88
HMGN1-206ENST00000431390 ELOA2Q8IYF1 753 aaPredicted RBP20.55■□□□□ 0.88
HMGN1-206ENST00000431390 IL31RAQ8NI17 732 aa20.55■□□□□ 0.88
HMGN1-206ENST00000431390 CYP2W1Q8TAV3 490 aa20.55■□□□□ 0.88
HMGN1-206ENST00000431390 USP25Q9UHP3 1055 aa20.55■□□□□ 0.88
HMGN1-206ENST00000431390 UBIAD1Q9Y5Z9 338 aa20.55■□□□□ 0.88
HMGN1-206ENST00000431390 SYCE3A1L190 88 aa20.55■□□□□ 0.88
HMGN1-206ENST00000431390 MSH4O15457 936 aa20.55■□□□□ 0.88
HMGN1-206ENST00000431390 CCND2P30279 289 aa20.55■□□□□ 0.88
HMGN1-206ENST00000431390 UBA7P41226 1012 aa20.55■□□□□ 0.88
HMGN1-206ENST00000431390 FXR1P51114 621 aaKnown RBP eCLIP20.55■□□□□ 0.88
HMGN1-206ENST00000431390 CAMK4Q16566 473 aa20.55■□□□□ 0.88
HMGN1-206ENST00000431390 ARHGAP39Q9C0H5 1083 aa20.55■□□□□ 0.88
HMGN1-206ENST00000431390 MRPS9P82933 396 aaKnown RBP20.54■□□□□ 0.88
HMGN1-206ENST00000431390 KRBA2Q6ZNG9 492 aa20.54■□□□□ 0.88
HMGN1-206ENST00000431390 ANKRD13CQ8N6S4 541 aa20.54■□□□□ 0.88
HMGN1-206ENST00000431390 PURBQ96QR8 312 aaKnown RBP20.54■□□□□ 0.88
HMGN1-206ENST00000431390 IWS1Q96ST2 819 aa20.54■□□□□ 0.88
HMGN1-206ENST00000431390 SDF4Q9BRK5 362 aa20.54■□□□□ 0.88
HMGN1-206ENST00000431390 JADE2Q9NQC1 790 aa20.54■□□□□ 0.88
HMGN1-206ENST00000431390 LRWD1Q9UFC0 647 aa20.54■□□□□ 0.88
HMGN1-206ENST00000431390 ZNFX1Q9P2E3 1918 aaKnown RBP20.54■□□□□ 0.88
HMGN1-206ENST00000431390 STAM2O75886 525 aa20.53■□□□□ 0.88
HMGN1-206ENST00000431390 NR3C2P08235 984 aa20.53■□□□□ 0.88
HMGN1-206ENST00000431390 FAM110CQ1W6H9 321 aa20.53■□□□□ 0.88
HMGN1-206ENST00000431390 LONRF3Q496Y0 759 aa20.53■□□□□ 0.88
HMGN1-206ENST00000431390 KANK3Q6NY19 840 aa20.53■□□□□ 0.88
HMGN1-206ENST00000431390 CABP7Q86V35 215 aa20.53■□□□□ 0.88
HMGN1-206ENST00000431390 VSIG10LQ86VR7 867 aa20.53■□□□□ 0.88
HMGN1-206ENST00000431390 CNNM3Q8NE01 707 aa20.53■□□□□ 0.88
HMGN1-206ENST00000431390 SH3TC2Q8TF17 1288 aa20.53■□□□□ 0.88
HMGN1-206ENST00000431390 ADD3Q9UEY8 706 aaKnown RBP20.53■□□□□ 0.88
HMGN1-206ENST00000431390 CCDC39Q9UFE4 941 aa20.53■□□□□ 0.88
HMGN1-206ENST00000431390 A0A087X0B3 334 aa20.52■□□□□ 0.88
HMGN1-206ENST00000431390 PP2D1A8MPX8 630 aa20.52■□□□□ 0.88
HMGN1-206ENST00000431390 POTEB2H3BUK9 544 aa20.52■□□□□ 0.88
HMGN1-206ENST00000431390 SLC26A4O43511 780 aa20.52■□□□□ 0.88
HMGN1-206ENST00000431390 ACTN4O43707 911 aaKnown RBP20.52■□□□□ 0.88
HMGN1-206ENST00000431390 TLR2O60603 784 aa20.52■□□□□ 0.88
HMGN1-206ENST00000431390 ITGB5P18084 799 aa20.52■□□□□ 0.88
HMGN1-206ENST00000431390 KCTD2Q14681 263 aa20.52■□□□□ 0.88
HMGN1-206ENST00000431390 LRSAM1Q6UWE0 723 aa20.52■□□□□ 0.88
HMGN1-206ENST00000431390 PDILTQ8N807 584 aa20.52■□□□□ 0.88
HMGN1-206ENST00000431390 FAM133AQ8N9E0 248 aa20.52■□□□□ 0.88
HMGN1-206ENST00000431390 IQUBQ8NA54 791 aa20.52■□□□□ 0.88
HMGN1-206ENST00000431390 SLC5A5Q92911 643 aa20.52■□□□□ 0.88
HMGN1-206ENST00000431390 CCDC34Q96HJ3 373 aa20.52■□□□□ 0.88
HMGN1-206ENST00000431390 MMP19Q99542 508 aa20.52■□□□□ 0.88
HMGN1-206ENST00000431390 DISC1Q9NRI5 854 aa20.52■□□□□ 0.88
HMGN1-206ENST00000431390 HOOK1Q9UJC3 728 aaKnown RBP20.52■□□□□ 0.88
HMGN1-206ENST00000431390 COLQQ9Y215 455 aaPredicted RBP20.52■□□□□ 0.88
HMGN1-206ENST00000431390 STK24Q9Y6E0 443 aa20.52■□□□□ 0.88
HMGN1-206ENST00000431390 PLXNB2O15031 1838 aa20.52■□□□□ 0.88
HMGN1-206ENST00000431390 ADGRA2Q96PE1 1338 aa20.52■□□□□ 0.88
HMGN1-206ENST00000431390 POTEMA6NI47 508 aa20.51■□□□□ 0.87
HMGN1-206ENST00000431390 ECM2O94769 699 aaPredicted RBP20.51■□□□□ 0.87
HMGN1-206ENST00000431390 MYCLP12524 364 aaPredicted RBP20.51■□□□□ 0.87
HMGN1-206ENST00000431390 CDC25AP30304 524 aa20.51■□□□□ 0.87
HMGN1-206ENST00000431390 GSE1Q14687 1217 aa20.51■□□□□ 0.87
HMGN1-206ENST00000431390 E2F4Q16254 413 aa20.51■□□□□ 0.87
HMGN1-206ENST00000431390 DHX58Q96C10 678 aa20.51■□□□□ 0.87
HMGN1-206ENST00000431390 PANK2Q9BZ23 570 aa20.51■□□□□ 0.87
HMGN1-206ENST00000431390 PORCNQ9H237 461 aa20.51■□□□□ 0.87
HMGN1-206ENST00000431390 SERTAD1Q9UHV2 236 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms