RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 TSPY2A6NKD2 308 aa9.26□□□□□ -0.93
ECHDC1-207ENST00000430841 PARNO95453 639 aaKnown RBP9.26□□□□□ -0.93
ECHDC1-207ENST00000430841 ZFYP08048 801 aaPredicted RBP9.26□□□□□ -0.93
ECHDC1-207ENST00000430841 KCNA5P22460 613 aa9.26□□□□□ -0.93
ECHDC1-207ENST00000430841 NKX3-2P78367 333 aa9.26□□□□□ -0.93
ECHDC1-207ENST00000430841 PUS10Q3MIT2 529 aaKnown RBP9.26□□□□□ -0.93
ECHDC1-207ENST00000430841 KRT40Q6A162 431 aa9.26□□□□□ -0.93
ECHDC1-207ENST00000430841 NFRKBQ6P4R8 1299 aa9.26□□□□□ -0.93
ECHDC1-207ENST00000430841 GJD3Q8N144 294 aa9.26□□□□□ -0.93
ECHDC1-207ENST00000430841 CAGE1Q8TC20 777 aa9.26□□□□□ -0.93
ECHDC1-207ENST00000430841 STAG1Q8WVM7 1258 aa9.26□□□□□ -0.93
ECHDC1-207ENST00000430841 GMCL1Q96IK5 515 aa9.26□□□□□ -0.93
ECHDC1-207ENST00000430841 TGS1Q96RS0 853 aaKnown RBP9.26□□□□□ -0.93
ECHDC1-207ENST00000430841 NAPBQ9H115 298 aa9.26□□□□□ -0.93
ECHDC1-207ENST00000430841 UBE2ZQ9H832 354 aaPredicted RBP9.26□□□□□ -0.93
ECHDC1-207ENST00000430841 TOMM22Q9NS69 142 aa9.26□□□□□ -0.93
ECHDC1-207ENST00000430841 LMCD1Q9NZU5 365 aa9.26□□□□□ -0.93
ECHDC1-207ENST00000430841 PNMA2Q9UL42 364 aa9.26□□□□□ -0.93
ECHDC1-207ENST00000430841 ASTN1O14525 1302 aa9.26□□□□□ -0.93
ECHDC1-207ENST00000430841 LOC102724159A0A0B4J2E5 919 aa9.25□□□□□ -0.93
ECHDC1-207ENST00000430841 CTAGE5O15320 804 aa9.25□□□□□ -0.93
ECHDC1-207ENST00000430841 MCCP23508 829 aa9.25□□□□□ -0.93
ECHDC1-207ENST00000430841 MRE11P49959 708 aa9.25□□□□□ -0.93
ECHDC1-207ENST00000430841 PURAQ00577 322 aaKnown RBP9.25□□□□□ -0.93
ECHDC1-207ENST00000430841 PTPN11Q06124 597 aaPredicted RBP9.25□□□□□ -0.93
ECHDC1-207ENST00000430841 PWP2Q15269 919 aaKnown RBP9.25□□□□□ -0.93
ECHDC1-207ENST00000430841 NBPF20Q3BBV1 942 aa9.25□□□□□ -0.93
ECHDC1-207ENST00000430841 SLFNL1Q499Z3 407 aa9.25□□□□□ -0.93
ECHDC1-207ENST00000430841 PTCRAQ6ISU1 281 aaPredicted RBP9.25□□□□□ -0.93
ECHDC1-207ENST00000430841 AFAP1L1Q8TED9 768 aa9.25□□□□□ -0.93
ECHDC1-207ENST00000430841 SCFD2Q8WU76 684 aa9.25□□□□□ -0.93
ECHDC1-207ENST00000430841 APPBP2Q92624 585 aa9.25□□□□□ -0.93
ECHDC1-207ENST00000430841 FGD4Q96M96 766 aa9.25□□□□□ -0.93
ECHDC1-207ENST00000430841 LRRCC1Q9C099 1032 aa9.25□□□□□ -0.93
ECHDC1-207ENST00000430841 KATNBL1Q9H079 304 aa9.25□□□□□ -0.93
ECHDC1-207ENST00000430841 PUS7LQ9H0K6 701 aaKnown RBP9.25□□□□□ -0.93
ECHDC1-207ENST00000430841 PDGFCQ9NRA1 345 aa9.25□□□□□ -0.93
ECHDC1-207ENST00000430841 CYP39A1Q9NYL5 469 aa9.25□□□□□ -0.93
ECHDC1-207ENST00000430841 SCN5AQ14524 2016 aa9.25□□□□□ -0.93
ECHDC1-207ENST00000430841 EPOPA6NHQ4 379 aa9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 PI4K2BG5E9Z4 385 aa9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 GPAA1O43292 621 aa9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 IQCF3P0C7M6 154 aa9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 CALML3P27482 149 aa9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 CLCN1P35523 988 aa9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 SMCPP49901 116 aaPredicted RBP9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 ALDH5A1P51649 535 aaPredicted RBP9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 WDR5P61964 334 aaKnown RBP9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 TFAP4Q01664 338 aa9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 PTGDRQ13258 359 aa9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 PTGISQ16647 500 aa9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 TIGD5Q53EQ6 642 aa9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 FAM117BQ6P1L5 589 aa9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 CNKSR3Q6P9H4 555 aa9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 KCTD1Q719H9 257 aa9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 LRRC8DQ7L1W4 858 aa9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 MKL1Q969V6 931 aa9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 STRBPQ96SI9 672 aaKnown RBP9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 PRR14Q9BWN1 585 aa9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 UPF3BQ9BZI7 483 aaKnown RBP9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 DDX19BQ9UMR2 479 aa9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 GRIN2DO15399 1336 aa9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 PLIN4Q96Q06 1357 aa9.24□□□□□ -0.93
ECHDC1-207ENST00000430841 DCXO43602 365 aa9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 AMHP03971 560 aa9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 ICAM1P05362 532 aa9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 TXNP10599 105 aaKnown RBP9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 SELPP16109 830 aa9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 SNAP25P60880 206 aa9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 INSM1Q01101 510 aaPredicted RBP9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 IKBKEQ14164 716 aa9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 LEXMQ3ZCV2 418 aa9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 MUM1L1Q5H9M0 696 aa9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 RCSD1Q6JBY9 416 aa9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 TAPT1Q6NXT6 567 aa9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 RNF207Q6ZRF8 634 aa9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 C7orf31Q8N865 590 aa9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 NEDD1Q8NHV4 660 aa9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 PANK1Q8TE04 598 aa9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 MFSD14AQ96MC6 490 aa9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 POP1Q99575 1024 aaKnown RBP9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 RAD9AQ99638 391 aa9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 ARID3AQ99856 593 aa9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 KATNAL1Q9BW62 490 aa9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 SLC6A16Q9GZN6 736 aa9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 KCNH6Q9H252 994 aa9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 TMEM134Q9H6X4 195 aa9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 ECHDC1Q9NTX5 307 aa9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 PRR12Q9ULL5 1215 aa9.23□□□□□ -0.93
ECHDC1-207ENST00000430841 IGKV6D-41A0A0C4DH26 115 aa9.22□□□□□ -0.93
ECHDC1-207ENST00000430841 ABHD14A-ACY1A0A1B0GW23 586 aa9.22□□□□□ -0.93
ECHDC1-207ENST00000430841 GSG1L2A8MUP6 293 aa9.22□□□□□ -0.93
ECHDC1-207ENST00000430841 CCER2I3L3R5 266 aa9.22□□□□□ -0.93
ECHDC1-207ENST00000430841 AXIN1O15169 862 aa9.22□□□□□ -0.93
ECHDC1-207ENST00000430841 RNF113AO15541 343 aaKnown RBP9.22□□□□□ -0.93
ECHDC1-207ENST00000430841 RANBP6O60518 1105 aaKnown RBP9.22□□□□□ -0.93
ECHDC1-207ENST00000430841 PLA2G6O60733 806 aa9.22□□□□□ -0.93
ECHDC1-207ENST00000430841 RLBP1P12271 317 aa9.22□□□□□ -0.93
ECHDC1-207ENST00000430841 CASTP20810 708 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms